RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 A6NED7 52 aa7.68□□□□□ -1.18
MAP1LC3A-204ENST00000476428 KRTAP19-3Q7Z4W3 81 aa7.65□□□□□ -1.18
MAP1LC3A-204ENST00000476428 LCE5AQ5TCM9 118 aa7.64□□□□□ -1.19
MAP1LC3A-204ENST00000476428 DSTQ03001 7570 aaKnown RBP7.6□□□□□ -1.19
MAP1LC3A-204ENST00000476428 KRTAP4-9Q9BYQ8 210 aa7.57□□□□□ -1.2
MAP1LC3A-204ENST00000476428 KRTAP25-1Q3LHN0 102 aa7.53□□□□□ -1.2
MAP1LC3A-204ENST00000476428 MT1GP13640 62 aa7.52□□□□□ -1.21
MAP1LC3A-204ENST00000476428 MT1LQ93083 61 aa7.49□□□□□ -1.21
MAP1LC3A-204ENST00000476428 KRTAP12-3P60328 96 aa7.42□□□□□ -1.22
MAP1LC3A-204ENST00000476428 PP632Q6XCG6 107 aa7.42□□□□□ -1.22
MAP1LC3A-204ENST00000476428 MT1MQ8N339 61 aa7.39□□□□□ -1.23
MAP1LC3A-204ENST00000476428 CDC42SE1Q9NRR8 79 aa7.38□□□□□ -1.23
MAP1LC3A-204ENST00000476428 LCE1DQ5T752 114 aa7.28□□□□□ -1.24
MAP1LC3A-204ENST00000476428 KRTAP23-1A1A580 65 aa7.27□□□□□ -1.25
MAP1LC3A-204ENST00000476428 ROMO1P60602 79 aa7.26□□□□□ -1.25
MAP1LC3A-204ENST00000476428 KRTAP4-3Q9BYR4 195 aa7.23□□□□□ -1.25
MAP1LC3A-204ENST00000476428 KRTAP4-7Q9BYR0 210 aa7.16□□□□□ -1.26
MAP1LC3A-204ENST00000476428 MT4P47944 62 aa7.14□□□□□ -1.27
MAP1LC3A-204ENST00000476428 HMCN1Q96RW7 5635 aa7.14□□□□□ -1.27
MAP1LC3A-204ENST00000476428 KRTAP5-10Q6L8G5 202 aa7.09□□□□□ -1.27
MAP1LC3A-204ENST00000476428 AHNAK2Q8IVF2 5795 aa7.07□□□□□ -1.28
MAP1LC3A-204ENST00000476428 LCE4AQ5TA78 99 aa7.05□□□□□ -1.28
MAP1LC3A-204ENST00000476428 KRTAP15-1Q3LI76 137 aa7.03□□□□□ -1.28
MAP1LC3A-204ENST00000476428 KRTAP19-4Q3LI73 84 aa7□□□□□ -1.29
MAP1LC3A-204ENST00000476428 KRTAP5-7Q6L8G8 165 aa6.9□□□□□ -1.3
MAP1LC3A-204ENST00000476428 BRK1Q8WUW1 75 aa6.89□□□□□ -1.31
MAP1LC3A-204ENST00000476428 KRTAP5-4Q6L8H1 288 aa6.88□□□□□ -1.31
MAP1LC3A-204ENST00000476428 LCE3CQ5T5A8 94 aa6.86□□□□□ -1.31
MAP1LC3A-204ENST00000476428 KRTAP4-6Q9BYQ5 205 aa6.84□□□□□ -1.31
MAP1LC3A-204ENST00000476428 LOC100996750A0A140TA64 210 aa6.77□□□□□ -1.33
MAP1LC3A-204ENST00000476428 KRTAP5-3Q6L8H2 238 aa6.77□□□□□ -1.33
MAP1LC3A-204ENST00000476428 KRTAP5-5Q701N2 237 aaPredicted RBP6.75□□□□□ -1.33
MAP1LC3A-204ENST00000476428 SPRR5A0A1B0GTR4 108 aa6.73□□□□□ -1.33
MAP1LC3A-204ENST00000476428 PMAIP1Q13794 54 aa6.5□□□□□ -1.37
MAP1LC3A-204ENST00000476428 KRTAP9-6A8MVA2 160 aa6.49□□□□□ -1.37
MAP1LC3A-204ENST00000476428 KRTAP12-4P60329 112 aa6.49□□□□□ -1.37
MAP1LC3A-204ENST00000476428 KRTAP20-2Q3LI61 65 aa6.47□□□□□ -1.37
MAP1LC3A-204ENST00000476428 SYNE1Q8NF91 8797 aaKnown RBP6.46□□□□□ -1.38
MAP1LC3A-204ENST00000476428 MT1AP04731 61 aa6.38□□□□□ -1.39
MAP1LC3A-204ENST00000476428 KRTAP6-1Q3LI64 71 aa6.33□□□□□ -1.4
MAP1LC3A-204ENST00000476428 PRAC1Q96KF2 57 aa6.23□□□□□ -1.41
MAP1LC3A-204ENST00000476428 PRO0628Q9UI54 55 aa6.23□□□□□ -1.41
MAP1LC3A-204ENST00000476428 KRTAP9-4Q9BYQ2 154 aa6.15□□□□□ -1.42
MAP1LC3A-204ENST00000476428 KRTAP4-11Q9BYQ6 195 aa6.09□□□□□ -1.43
MAP1LC3A-204ENST00000476428 KRTAP5-2Q701N4 177 aa6.08□□□□□ -1.44
MAP1LC3A-204ENST00000476428 AHNAKQ09666 5890 aaKnown RBP6□□□□□ -1.45
MAP1LC3A-204ENST00000476428 KRTAP6-2Q3LI66 62 aa5.99□□□□□ -1.45
MAP1LC3A-204ENST00000476428 MUC5ACP98088 5654 aa5.96□□□□□ -1.46
MAP1LC3A-204ENST00000476428 MUC5BQ9HC84 5762 aaPredicted RBP5.92□□□□□ -1.46
MAP1LC3A-204ENST00000476428 KRTAP5-8O75690 187 aa5.92□□□□□ -1.46
MAP1LC3A-204ENST00000476428 KTN1-AS1Q86SY8 53 aa5.89□□□□□ -1.47
MAP1LC3A-204ENST00000476428 MT3P25713 68 aa5.82□□□□□ -1.48
MAP1LC3A-204ENST00000476428 KRTAP9-9Q9BYP9 154 aa5.74□□□□□ -1.49
MAP1LC3A-204ENST00000476428 OBSCNQ5VST9 7968 aa5.67□□□□□ -1.5
MAP1LC3A-204ENST00000476428 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
MAP1LC3A-204ENST00000476428 KRTAP5-1Q6L8H4 278 aa5.4□□□□□ -1.54
MAP1LC3A-204ENST00000476428 LCE1EQ5T753 118 aa5.27□□□□□ -1.57
MAP1LC3A-204ENST00000476428 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
MAP1LC3A-204ENST00000476428 LCE3DQ9BYE3 92 aa5□□□□□ -1.61
MAP1LC3A-204ENST00000476428 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
MAP1LC3A-204ENST00000476428 LCE1BQ5T7P3 118 aa4.95□□□□□ -1.62
MAP1LC3A-204ENST00000476428 LCE1CQ5T751 118 aa4.88□□□□□ -1.63
MAP1LC3A-204ENST00000476428 LCE3EQ5T5B0 92 aa4.76□□□□□ -1.65
MAP1LC3A-204ENST00000476428 KRTAP4-12Q9BQ66 201 aa4.56□□□□□ -1.68
MAP1LC3A-204ENST00000476428 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
MAP1LC3A-204ENST00000476428 NDUFAF8A1L188 74 aa4.41□□□□□ -1.7
MAP1LC3A-204ENST00000476428 KRTAP5-11Q6L8G4 156 aa4.39□□□□□ -1.71
MAP1LC3A-204ENST00000476428 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
MAP1LC3A-204ENST00000476428 PHGR1C9JFL3 82 aa4.19□□□□□ -1.74
MAP1LC3A-204ENST00000476428 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
MAP1LC3A-204ENST00000476428 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
MAP1LC3A-204ENST00000476428 PRM1P04553 51 aa3.73□□□□□ -1.81
MAP1LC3A-204ENST00000476428 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
MAP1LC3A-204ENST00000476428 INE1O15225 51 aa3.56□□□□□ -1.84
MAP1LC3A-204ENST00000476428 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
MAP1LC3A-204ENST00000476428 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
MAP1LC3A-204ENST00000476428 MUC16Q8WXI7 14507 aa2.47□□□□□ -2.01
MAP1LC3A-204ENST00000476428 H3BS24 57 aa2.16□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 75.2 ms