RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 SPRR2DP22532 72 aa10.85□□□□□ -0.67
HOXB3-208ENST00000476342 KRTAP2-3P0C7H8 128 aa10.75□□□□□ -0.69
HOXB3-208ENST00000476342 KRTAP2-4Q9BYR9 128 aa10.75□□□□□ -0.69
HOXB3-208ENST00000476342 KRTAP19-3Q7Z4W3 81 aa10.75□□□□□ -0.69
HOXB3-208ENST00000476342 ROMO1P60602 79 aa10.69□□□□□ -0.7
HOXB3-208ENST00000476342 LCE5AQ5TCM9 118 aa10.68□□□□□ -0.7
HOXB3-208ENST00000476342 KRTAP12-3P60328 96 aa10.6□□□□□ -0.71
HOXB3-208ENST00000476342 KRTAP23-1A1A580 65 aa10.58□□□□□ -0.72
HOXB3-208ENST00000476342 MT1GP13640 62 aa10.58□□□□□ -0.72
HOXB3-208ENST00000476342 MT1LQ93083 61 aa10.56□□□□□ -0.72
HOXB3-208ENST00000476342 PP632Q6XCG6 107 aa10.51□□□□□ -0.73
HOXB3-208ENST00000476342 LCE3BQ5TA77 95 aa10.5□□□□□ -0.73
HOXB3-208ENST00000476342 KRTAP2-2Q9BYT5 123 aa10.45□□□□□ -0.74
HOXB3-208ENST00000476342 KRTAP2-1Q9BYU5 128 aa10.45□□□□□ -0.74
HOXB3-208ENST00000476342 MT1MQ8N339 61 aa10.37□□□□□ -0.75
HOXB3-208ENST00000476342 DSTQ03001 7570 aaKnown RBP10.31□□□□□ -0.76
HOXB3-208ENST00000476342 KRTAP15-1Q3LI76 137 aa10.11□□□□□ -0.79
HOXB3-208ENST00000476342 PRAC1Q96KF2 57 aa10.11□□□□□ -0.79
HOXB3-208ENST00000476342 KRTAP19-4Q3LI73 84 aa10.08□□□□□ -0.8
HOXB3-208ENST00000476342 KRTAP4-3Q9BYR4 195 aa10.07□□□□□ -0.8
HOXB3-208ENST00000476342 KRTAP4-7Q9BYR0 210 aa10.03□□□□□ -0.8
HOXB3-208ENST00000476342 LCE3CQ5T5A8 94 aa9.81□□□□□ -0.84
HOXB3-208ENST00000476342 LCE4AQ5TA78 99 aa9.64□□□□□ -0.87
HOXB3-208ENST00000476342 KRTAP4-9Q9BYQ8 210 aa9.57□□□□□ -0.88
HOXB3-208ENST00000476342 KRTAP5-4Q6L8H1 288 aa9.54□□□□□ -0.88
HOXB3-208ENST00000476342 LOC100996750A0A140TA64 210 aa9.48□□□□□ -0.89
HOXB3-208ENST00000476342 LCE1DQ5T752 114 aa9.45□□□□□ -0.9
HOXB3-208ENST00000476342 KRTAP5-5Q701N2 237 aaPredicted RBP9.45□□□□□ -0.9
HOXB3-208ENST00000476342 MT4P47944 62 aa9.42□□□□□ -0.9
HOXB3-208ENST00000476342 H3BS24 57 aa9.34□□□□□ -0.91
HOXB3-208ENST00000476342 HMCN1Q96RW7 5635 aa9.27□□□□□ -0.93
HOXB3-208ENST00000476342 KRTAP4-6Q9BYQ5 205 aa9.2□□□□□ -0.94
HOXB3-208ENST00000476342 KRTAP9-6A8MVA2 160 aa9.19□□□□□ -0.94
HOXB3-208ENST00000476342 KRTAP12-4P60329 112 aa9.11□□□□□ -0.95
HOXB3-208ENST00000476342 SPRR5A0A1B0GTR4 108 aa9.01□□□□□ -0.97
HOXB3-208ENST00000476342 MT1AP04731 61 aa9□□□□□ -0.97
HOXB3-208ENST00000476342 SYNE1Q8NF91 8797 aaKnown RBP8.98□□□□□ -0.97
HOXB3-208ENST00000476342 KRTAP20-2Q3LI61 65 aa8.97□□□□□ -0.97
HOXB3-208ENST00000476342 KRTAP6-1Q3LI64 71 aa8.89□□□□□ -0.99
HOXB3-208ENST00000476342 GPR98Q8WXG9 6306 aa8.74□□□□□ -1.01
HOXB3-208ENST00000476342 AHNAK2Q8IVF2 5795 aa8.67□□□□□ -1.02
HOXB3-208ENST00000476342 KRTAP5-3Q6L8H2 238 aa8.67□□□□□ -1.02
HOXB3-208ENST00000476342 NDUFAF8A1L188 74 aa8.64□□□□□ -1.03
HOXB3-208ENST00000476342 KRTAP9-4Q9BYQ2 154 aa8.63□□□□□ -1.03
HOXB3-208ENST00000476342 KRTAP5-10Q6L8G5 202 aa8.46□□□□□ -1.05
HOXB3-208ENST00000476342 KRTAP5-2Q701N4 177 aa8.46□□□□□ -1.06
HOXB3-208ENST00000476342 KRTAP6-2Q3LI66 62 aa8.38□□□□□ -1.07
HOXB3-208ENST00000476342 LUZP6Q538Z0 58 aa8.24□□□□□ -1.09
HOXB3-208ENST00000476342 MT3P25713 68 aa8.23□□□□□ -1.09
HOXB3-208ENST00000476342 KRTAP5-7Q6L8G8 165 aa8.05□□□□□ -1.12
HOXB3-208ENST00000476342 KRTAP4-11Q9BYQ6 195 aa8.04□□□□□ -1.12
HOXB3-208ENST00000476342 A0A0A0MQY5 61 aa8.03□□□□□ -1.12
HOXB3-208ENST00000476342 OBSCNQ5VST9 7968 aa7.9□□□□□ -1.15
HOXB3-208ENST00000476342 KRTAP5-8O75690 187 aa7.75□□□□□ -1.17
HOXB3-208ENST00000476342 KRTAP5-1Q6L8H4 278 aa7.47□□□□□ -1.21
HOXB3-208ENST00000476342 LCE1EQ5T753 118 aa7.4□□□□□ -1.22
HOXB3-208ENST00000476342 INE1O15225 51 aa7.35□□□□□ -1.23
HOXB3-208ENST00000476342 MUC5ACP98088 5654 aa7.28□□□□□ -1.24
HOXB3-208ENST00000476342 KRTAP9-9Q9BYP9 154 aa7.27□□□□□ -1.24
HOXB3-208ENST00000476342 LCE3DQ9BYE3 92 aa7.21□□□□□ -1.25
HOXB3-208ENST00000476342 MUC5BQ9HC84 5762 aaPredicted RBP7.09□□□□□ -1.27
HOXB3-208ENST00000476342 AHNAKQ09666 5890 aaKnown RBP6.92□□□□□ -1.3
HOXB3-208ENST00000476342 LCE1BQ5T7P3 118 aa6.92□□□□□ -1.3
HOXB3-208ENST00000476342 KRTAP4-2Q9BYR5 136 aa6.91□□□□□ -1.3
HOXB3-208ENST00000476342 LCE3EQ5T5B0 92 aa6.89□□□□□ -1.31
HOXB3-208ENST00000476342 LCE1CQ5T751 118 aa6.86□□□□□ -1.31
HOXB3-208ENST00000476342 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.33□□□□□ -1.4
HOXB3-208ENST00000476342 KRTAP5-11Q6L8G4 156 aa6.17□□□□□ -1.42
HOXB3-208ENST00000476342 KRTAP4-12Q9BQ66 201 aa6.03□□□□□ -1.44
HOXB3-208ENST00000476342 LCE1FQ5T754 118 aa5.88□□□□□ -1.47
HOXB3-208ENST00000476342 KRTAP21-2Q3LI59 83 aa5.84□□□□□ -1.47
HOXB3-208ENST00000476342 PRM1P04553 51 aa5.49□□□□□ -1.53
HOXB3-208ENST00000476342 PHGR1C9JFL3 82 aa5.3□□□□□ -1.56
HOXB3-208ENST00000476342 KRTAP4-4Q9BYR3 166 aa5.25□□□□□ -1.57
HOXB3-208ENST00000476342 MUC19Q7Z5P9 8384 aa4.81□□□□□ -1.64
HOXB3-208ENST00000476342 KRTAP21-1Q3LI58 79 aa3.73□□□□□ -1.81
HOXB3-208ENST00000476342 MUC16Q8WXI7 14507 aa3.38□□□□□ -1.87
Retrieved 77 of 20,778 RNA–protein pairs in 13.6 ms