RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 H0YAA0 97 aa1.02□□□□□ -2.25
PTCD3-211ENST00000476215 NDUFC1O43677 76 aa1.02□□□□□ -2.25
PTCD3-211ENST00000476215 KRTAP2-3P0C7H8 128 aa1.02□□□□□ -2.25
PTCD3-211ENST00000476215 ETDBQ3ZM63 59 aa1.02□□□□□ -2.25
PTCD3-211ENST00000476215 GTF2H5Q6ZYL4 71 aa1.02□□□□□ -2.25
PTCD3-211ENST00000476215 KRTAP2-4Q9BYR9 128 aa1.02□□□□□ -2.25
PTCD3-211ENST00000476215 TRAV22A0A0B4J277 110 aa1.01□□□□□ -2.25
PTCD3-211ENST00000476215 UQCRQO14949 82 aa1.01□□□□□ -2.25
PTCD3-211ENST00000476215 ACYP1P07311 99 aa1.01□□□□□ -2.25
PTCD3-211ENST00000476215 H0Y9P7 68 aa1□□□□□ -2.25
PTCD3-211ENST00000476215 ATOX1O00244 68 aa1□□□□□ -2.25
PTCD3-211ENST00000476215 MT1XP80297 61 aa1□□□□□ -2.25
PTCD3-211ENST00000476215 LINC01554Q52M75 96 aa1□□□□□ -2.25
PTCD3-211ENST00000476215 PLAC4Q8WY50 150 aa1□□□□□ -2.25
PTCD3-211ENST00000476215 ATP5EP2Q5VTU8 51 aa0.99□□□□□ -2.25
PTCD3-211ENST00000476215 LINC00208Q96KT6 92 aa0.99□□□□□ -2.25
PTCD3-211ENST00000476215 SPRR2FQ96RM1 72 aa0.99□□□□□ -2.25
PTCD3-211ENST00000476215 SPRR2EP22531 72 aa0.98□□□□□ -2.25
PTCD3-211ENST00000476215 SPRR2BP35325 72 aa0.98□□□□□ -2.25
PTCD3-211ENST00000476215 SPRR2AP35326 72 aa0.98□□□□□ -2.25
PTCD3-211ENST00000476215 LINC00643Q86TS7 51 aa0.98□□□□□ -2.25
PTCD3-211ENST00000476215 KRTAP8-1Q8IUC2 63 aa0.98□□□□□ -2.25
PTCD3-211ENST00000476215 KRTAP2-1Q9BYU5 128 aa0.98□□□□□ -2.25
PTCD3-211ENST00000476215 C20orf197Q8N268 126 aa0.97□□□□□ -2.25
PTCD3-211ENST00000476215 M0QZ58 72 aa0.96□□□□□ -2.26
PTCD3-211ENST00000476215 GPR98Q8WXG9 6306 aa0.96□□□□□ -2.26
PTCD3-211ENST00000476215 SPRR2DP22532 72 aa0.95□□□□□ -2.26
PTCD3-211ENST00000476215 DMAC1Q96GE9 116 aa0.95□□□□□ -2.26
PTCD3-211ENST00000476215 SCGB1A1P11684 91 aa0.94□□□□□ -2.26
PTCD3-211ENST00000476215 ACYP2P14621 99 aa0.94□□□□□ -2.26
PTCD3-211ENST00000476215 CDC42SE1Q9NRR8 79 aa0.94□□□□□ -2.26
PTCD3-211ENST00000476215 A0A1B0GV90 55 aa0.93□□□□□ -2.26
PTCD3-211ENST00000476215 SPTSSBQ8NFR3 76 aa0.93□□□□□ -2.26
PTCD3-211ENST00000476215 J3QR89 54 aa0.92□□□□□ -2.26
PTCD3-211ENST00000476215 INE1O15225 51 aa0.92□□□□□ -2.26
PTCD3-211ENST00000476215 MT-ATP8P03928 68 aa0.92□□□□□ -2.26
PTCD3-211ENST00000476215 DSTQ03001 7570 aaKnown RBP0.91□□□□□ -2.26
PTCD3-211ENST00000476215 SMIM20Q8N5G0 67 aa0.91□□□□□ -2.26
PTCD3-211ENST00000476215 CHKB-CPT1BH3BT56 60 aa0.9□□□□□ -2.27
PTCD3-211ENST00000476215 MT1EP04732 61 aa0.89□□□□□ -2.27
PTCD3-211ENST00000476215 KRTAP19-7Q3SYF9 63 aa0.89□□□□□ -2.27
PTCD3-211ENST00000476215 KRTAP19-3Q7Z4W3 81 aa0.88□□□□□ -2.27
PTCD3-211ENST00000476215 A0A0D9SG42 100 aa0.87□□□□□ -2.27
PTCD3-211ENST00000476215 K7ERU9 68 aa0.87□□□□□ -2.27
PTCD3-211ENST00000476215 MT1GP13640 62 aa0.87□□□□□ -2.27
PTCD3-211ENST00000476215 AHNAK2Q8IVF2 5795 aa0.87□□□□□ -2.27
PTCD3-211ENST00000476215 KRTAP19-5Q3LI72 72 aa0.86□□□□□ -2.27
PTCD3-211ENST00000476215 SPATA8Q6RVD6 105 aa0.86□□□□□ -2.27
PTCD3-211ENST00000476215 SERP2Q8N6R1 65 aa0.86□□□□□ -2.27
PTCD3-211ENST00000476215 SERP1Q9Y6X1 66 aa0.86□□□□□ -2.27
PTCD3-211ENST00000476215 MT4P47944 62 aa0.84□□□□□ -2.27
PTCD3-211ENST00000476215 MT1MQ8N339 61 aa0.84□□□□□ -2.27
PTCD3-211ENST00000476215 MT1LQ93083 61 aa0.84□□□□□ -2.27
PTCD3-211ENST00000476215 C10orf95Q9H7T3 257 aa0.83□□□□□ -2.28
PTCD3-211ENST00000476215 H7BZZ5 65 aa0.82□□□□□ -2.28
PTCD3-211ENST00000476215 TNP1P09430 55 aa0.82□□□□□ -2.28
PTCD3-211ENST00000476215 COX7CP15954 63 aa0.82□□□□□ -2.28
PTCD3-211ENST00000476215 A0A1B0GU69 56 aa0.81□□□□□ -2.28
PTCD3-211ENST00000476215 KRTAP20-2Q3LI61 65 aa0.78□□□□□ -2.28
PTCD3-211ENST00000476215 PRR15LQ9BU68 103 aa0.78□□□□□ -2.28
PTCD3-211ENST00000476215 LINC01558Q9Y6Z2 57 aa0.78□□□□□ -2.28
PTCD3-211ENST00000476215 CCDC179H3BU77 68 aa0.76□□□□□ -2.29
PTCD3-211ENST00000476215 UQCR11O14957 56 aa0.76□□□□□ -2.29
PTCD3-211ENST00000476215 AHNAKQ09666 5890 aaKnown RBP0.76□□□□□ -2.29
PTCD3-211ENST00000476215 MUC5BQ9HC84 5762 aaPredicted RBP0.76□□□□□ -2.29
PTCD3-211ENST00000476215 ATP5EP56381 51 aaPredicted RBP0.75□□□□□ -2.29
PTCD3-211ENST00000476215 ROMO1P60602 79 aa0.75□□□□□ -2.29
PTCD3-211ENST00000476215 SYNE1Q8NF91 8797 aaKnown RBP0.75□□□□□ -2.29
PTCD3-211ENST00000476215 MIR22HGQ0VDD5 57 aa0.73□□□□□ -2.29
PTCD3-211ENST00000476215 MUC5ACP98088 5654 aa0.73□□□□□ -2.29
PTCD3-211ENST00000476215 MT1AP04731 61 aa0.71□□□□□ -2.3
PTCD3-211ENST00000476215 KRTAP6-1Q3LI64 71 aa0.71□□□□□ -2.3
PTCD3-211ENST00000476215 KRTAP6-2Q3LI66 62 aa0.7□□□□□ -2.3
PTCD3-211ENST00000476215 RPS28P62857 69 aaKnown RBP0.68□□□□□ -2.3
PTCD3-211ENST00000476215 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
PTCD3-211ENST00000476215 BRK1Q8WUW1 75 aa0.52□□□□□ -2.33
PTCD3-211ENST00000476215 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
PTCD3-211ENST00000476215 PRM1P04553 51 aa0.34□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 102.3 ms