RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 PRR15LQ9BU68 103 aa5.25□□□□□ -1.57
TMCO1-205ENST00000476143 KRTAP12-1P59990 96 aa5.23□□□□□ -1.57
TMCO1-205ENST00000476143 A8MU10 97 aa5.13□□□□□ -1.59
TMCO1-205ENST00000476143 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
TMCO1-205ENST00000476143 MT1EP04732 61 aa5.12□□□□□ -1.59
TMCO1-205ENST00000476143 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
TMCO1-205ENST00000476143 TNP1P09430 55 aa5.09□□□□□ -1.59
TMCO1-205ENST00000476143 LINC01558Q9Y6Z2 57 aa5.07□□□□□ -1.6
TMCO1-205ENST00000476143 GPR98Q8WXG9 6306 aa5.07□□□□□ -1.6
TMCO1-205ENST00000476143 KRTAP19-5Q3LI72 72 aa5.05□□□□□ -1.6
TMCO1-205ENST00000476143 PP632Q6XCG6 107 aa5.05□□□□□ -1.6
TMCO1-205ENST00000476143 UQCR11O14957 56 aa5.02□□□□□ -1.61
TMCO1-205ENST00000476143 MT1GP13640 62 aa5.01□□□□□ -1.61
TMCO1-205ENST00000476143 C10orf95Q9H7T3 257 aa4.98□□□□□ -1.61
TMCO1-205ENST00000476143 RPS28P62857 69 aaKnown RBP4.97□□□□□ -1.61
TMCO1-205ENST00000476143 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
TMCO1-205ENST00000476143 LCE3AQ5TA76 89 aa4.95□□□□□ -1.62
TMCO1-205ENST00000476143 K7ERS5 55 aa4.91□□□□□ -1.62
TMCO1-205ENST00000476143 Q1T7F1 81 aa4.91□□□□□ -1.62
TMCO1-205ENST00000476143 MIR22HGQ0VDD5 57 aa4.89□□□□□ -1.63
TMCO1-205ENST00000476143 MT1LQ93083 61 aa4.89□□□□□ -1.63
TMCO1-205ENST00000476143 V9GYY9 64 aa4.89□□□□□ -1.63
TMCO1-205ENST00000476143 MT1MQ8N339 61 aa4.88□□□□□ -1.63
TMCO1-205ENST00000476143 DSTQ03001 7570 aaKnown RBP4.88□□□□□ -1.63
TMCO1-205ENST00000476143 PSPHP1O15172 72 aa4.83□□□□□ -1.64
TMCO1-205ENST00000476143 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
TMCO1-205ENST00000476143 KRTAP25-1Q3LHN0 102 aa4.79□□□□□ -1.64
TMCO1-205ENST00000476143 MT4P47944 62 aa4.7□□□□□ -1.66
TMCO1-205ENST00000476143 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
TMCO1-205ENST00000476143 A6NED7 52 aa4.68□□□□□ -1.66
TMCO1-205ENST00000476143 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
TMCO1-205ENST00000476143 CDC42SE1Q9NRR8 79 aa4.59□□□□□ -1.67
TMCO1-205ENST00000476143 HMCN1Q96RW7 5635 aa4.54□□□□□ -1.68
TMCO1-205ENST00000476143 ROMO1P60602 79 aa4.47□□□□□ -1.69
TMCO1-205ENST00000476143 PRAC1Q96KF2 57 aa4.46□□□□□ -1.7
TMCO1-205ENST00000476143 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
TMCO1-205ENST00000476143 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
TMCO1-205ENST00000476143 BRK1Q8WUW1 75 aa4.42□□□□□ -1.7
TMCO1-205ENST00000476143 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
TMCO1-205ENST00000476143 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
TMCO1-205ENST00000476143 LCE3CQ5T5A8 94 aa4.4□□□□□ -1.71
TMCO1-205ENST00000476143 KRTAP20-2Q3LI61 65 aa4.38□□□□□ -1.71
TMCO1-205ENST00000476143 AHNAK2Q8IVF2 5795 aa4.38□□□□□ -1.71
TMCO1-205ENST00000476143 KRTAP5-10Q6L8G5 202 aa4.36□□□□□ -1.71
TMCO1-205ENST00000476143 KRTAP5-7Q6L8G8 165 aa4.26□□□□□ -1.73
TMCO1-205ENST00000476143 KRTAP5-11Q6L8G4 156 aa4.25□□□□□ -1.73
TMCO1-205ENST00000476143 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
TMCO1-205ENST00000476143 MT1AP04731 61 aa4.19□□□□□ -1.74
TMCO1-205ENST00000476143 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
TMCO1-205ENST00000476143 NDUFAF8A1L188 74 aa4.16□□□□□ -1.74
TMCO1-205ENST00000476143 PMAIP1Q13794 54 aa4.16□□□□□ -1.74
TMCO1-205ENST00000476143 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
TMCO1-205ENST00000476143 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
TMCO1-205ENST00000476143 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
TMCO1-205ENST00000476143 MT3P25713 68 aa4.02□□□□□ -1.77
TMCO1-205ENST00000476143 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
TMCO1-205ENST00000476143 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
TMCO1-205ENST00000476143 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
TMCO1-205ENST00000476143 AHNAKQ09666 5890 aaKnown RBP3.84□□□□□ -1.79
TMCO1-205ENST00000476143 KRTAP5-8O75690 187 aa3.84□□□□□ -1.79
TMCO1-205ENST00000476143 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
TMCO1-205ENST00000476143 MUC5ACP98088 5654 aa3.75□□□□□ -1.81
TMCO1-205ENST00000476143 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
TMCO1-205ENST00000476143 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
TMCO1-205ENST00000476143 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.82
TMCO1-205ENST00000476143 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
TMCO1-205ENST00000476143 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
TMCO1-205ENST00000476143 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
TMCO1-205ENST00000476143 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
TMCO1-205ENST00000476143 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
TMCO1-205ENST00000476143 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
TMCO1-205ENST00000476143 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
TMCO1-205ENST00000476143 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
TMCO1-205ENST00000476143 INE1O15225 51 aa2.44□□□□□ -2.02
TMCO1-205ENST00000476143 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
TMCO1-205ENST00000476143 PRM1P04553 51 aa2.26□□□□□ -2.05
TMCO1-205ENST00000476143 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
TMCO1-205ENST00000476143 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 67.4 ms