RNA–Protein interactions for RNA: ENST00000476018.2

VSTM4-203, Transcript of V-set and transmembrane domain containing 4, humanhuman

TSL 5

Gene VSTM4, Length 659 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-203ENST00000476018 KRTAP19-3Q7Z4W3 81 aa4.84□□□□□ -1.63
VSTM4-203ENST00000476018 MT1EP04732 61 aa4.82□□□□□ -1.64
VSTM4-203ENST00000476018 A0A0D9SG42 100 aa4.8□□□□□ -1.64
VSTM4-203ENST00000476018 TMEM258P61165 79 aa4.79□□□□□ -1.64
VSTM4-203ENST00000476018 SPATA8Q6RVD6 105 aa4.79□□□□□ -1.64
VSTM4-203ENST00000476018 PRR15LQ9BU68 103 aa4.78□□□□□ -1.64
VSTM4-203ENST00000476018 SMIM26A0A096LP01 95 aa4.77□□□□□ -1.65
VSTM4-203ENST00000476018 SPINT4Q6UDR6 99 aa4.75□□□□□ -1.65
VSTM4-203ENST00000476018 MT1GP13640 62 aa4.71□□□□□ -1.66
VSTM4-203ENST00000476018 PP632Q6XCG6 107 aa4.71□□□□□ -1.66
VSTM4-203ENST00000476018 LINC01558Q9Y6Z2 57 aa4.7□□□□□ -1.66
VSTM4-203ENST00000476018 KRTAP12-1P59990 96 aa4.69□□□□□ -1.66
VSTM4-203ENST00000476018 HMCN1Q96RW7 5635 aa4.68□□□□□ -1.66
VSTM4-203ENST00000476018 KRTAP19-5Q3LI72 72 aa4.67□□□□□ -1.66
VSTM4-203ENST00000476018 A8MU10 97 aa4.62□□□□□ -1.67
VSTM4-203ENST00000476018 KRTAP5-1Q6L8H4 278 aa4.62□□□□□ -1.67
VSTM4-203ENST00000476018 MT4P47944 62 aa4.61□□□□□ -1.67
VSTM4-203ENST00000476018 UQCR11O14957 56 aa4.6□□□□□ -1.67
VSTM4-203ENST00000476018 MT1MQ8N339 61 aa4.6□□□□□ -1.67
VSTM4-203ENST00000476018 MT1LQ93083 61 aa4.57□□□□□ -1.68
VSTM4-203ENST00000476018 AHNAK2Q8IVF2 5795 aa4.56□□□□□ -1.68
VSTM4-203ENST00000476018 V9GYY9 64 aa4.56□□□□□ -1.68
VSTM4-203ENST00000476018 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
VSTM4-203ENST00000476018 KRTAP5-4Q6L8H1 288 aa4.51□□□□□ -1.69
VSTM4-203ENST00000476018 TNP1P09430 55 aa4.5□□□□□ -1.69
VSTM4-203ENST00000476018 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
VSTM4-203ENST00000476018 MIR22HGQ0VDD5 57 aa4.48□□□□□ -1.69
VSTM4-203ENST00000476018 Q1T7F1 81 aa4.47□□□□□ -1.69
VSTM4-203ENST00000476018 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
VSTM4-203ENST00000476018 K7ERS5 55 aa4.46□□□□□ -1.7
VSTM4-203ENST00000476018 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
VSTM4-203ENST00000476018 KRTAP5-10Q6L8G5 202 aa4.46□□□□□ -1.7
VSTM4-203ENST00000476018 KRTAP4-3Q9BYR4 195 aa4.45□□□□□ -1.7
VSTM4-203ENST00000476018 PSPHP1O15172 72 aa4.43□□□□□ -1.7
VSTM4-203ENST00000476018 KRTAP4-4Q9BYR3 166 aa4.43□□□□□ -1.7
VSTM4-203ENST00000476018 PCP4P48539 62 aa4.38□□□□□ -1.71
VSTM4-203ENST00000476018 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
VSTM4-203ENST00000476018 RPS28P62857 69 aaKnown RBP4.36□□□□□ -1.71
VSTM4-203ENST00000476018 A6NED7 52 aa4.33□□□□□ -1.72
VSTM4-203ENST00000476018 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
VSTM4-203ENST00000476018 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
VSTM4-203ENST00000476018 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
VSTM4-203ENST00000476018 KRTAP20-2Q3LI61 65 aa4.27□□□□□ -1.73
VSTM4-203ENST00000476018 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
VSTM4-203ENST00000476018 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
VSTM4-203ENST00000476018 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
VSTM4-203ENST00000476018 KRTAP12-4P60329 112 aa4.23□□□□□ -1.73
VSTM4-203ENST00000476018 CDC42SE1Q9NRR8 79 aa4.19□□□□□ -1.74
VSTM4-203ENST00000476018 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
VSTM4-203ENST00000476018 ROMO1P60602 79 aa4.1□□□□□ -1.75
VSTM4-203ENST00000476018 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
VSTM4-203ENST00000476018 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
VSTM4-203ENST00000476018 MT1AP04731 61 aa3.9□□□□□ -1.79
VSTM4-203ENST00000476018 SVIPQ8NHG7 77 aa3.87□□□□□ -1.79
VSTM4-203ENST00000476018 KRTAP6-1Q3LI64 71 aa3.86□□□□□ -1.79
VSTM4-203ENST00000476018 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
VSTM4-203ENST00000476018 BRK1Q8WUW1 75 aa3.84□□□□□ -1.79
VSTM4-203ENST00000476018 MUC5BQ9HC84 5762 aaPredicted RBP3.81□□□□□ -1.8
VSTM4-203ENST00000476018 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
VSTM4-203ENST00000476018 KRTAP5-8O75690 187 aa3.81□□□□□ -1.8
VSTM4-203ENST00000476018 AHNAKQ09666 5890 aaKnown RBP3.81□□□□□ -1.8
VSTM4-203ENST00000476018 MUC5ACP98088 5654 aa3.78□□□□□ -1.8
VSTM4-203ENST00000476018 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
VSTM4-203ENST00000476018 PMAIP1Q13794 54 aa3.64□□□□□ -1.83
VSTM4-203ENST00000476018 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
VSTM4-203ENST00000476018 PRO0628Q9UI54 55 aa3.45□□□□□ -1.86
VSTM4-203ENST00000476018 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
VSTM4-203ENST00000476018 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
VSTM4-203ENST00000476018 KTN1-AS1Q86SY8 53 aa3.27□□□□□ -1.89
VSTM4-203ENST00000476018 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
VSTM4-203ENST00000476018 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
VSTM4-203ENST00000476018 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
VSTM4-203ENST00000476018 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
VSTM4-203ENST00000476018 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
VSTM4-203ENST00000476018 PRM1P04553 51 aa2.08□□□□□ -2.08
VSTM4-203ENST00000476018 INE1O15225 51 aa2.02□□□□□ -2.09
VSTM4-203ENST00000476018 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
VSTM4-203ENST00000476018 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms