RNA–Protein interactions for RNA: ENST00000475627.1

HLA-DMA-207, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 984 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-207ENST00000475627 USH2AO75445 5202 aa3.49□□□□□ -1.85
HLA-DMA-207ENST00000475627 KRTAP19-6Q3LI70 58 aa3.48□□□□□ -1.85
HLA-DMA-207ENST00000475627 KRTAP12-1P59990 96 aa3.44□□□□□ -1.86
HLA-DMA-207ENST00000475627 KRTAP10-5P60370 271 aa3.43□□□□□ -1.86
HLA-DMA-207ENST00000475627 KRTAP12-2P59991 146 aa3.41□□□□□ -1.86
HLA-DMA-207ENST00000475627 SSPOA2VEC9 5147 aa3.4□□□□□ -1.86
HLA-DMA-207ENST00000475627 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
HLA-DMA-207ENST00000475627 MT1XP80297 61 aa3.37□□□□□ -1.87
HLA-DMA-207ENST00000475627 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
HLA-DMA-207ENST00000475627 FCGBPQ9Y6R7 5405 aaPredicted RBP3.31□□□□□ -1.88
HLA-DMA-207ENST00000475627 TNP1P09430 55 aa3.3□□□□□ -1.88
HLA-DMA-207ENST00000475627 C10orf95Q9H7T3 257 aa3.29□□□□□ -1.88
HLA-DMA-207ENST00000475627 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
HLA-DMA-207ENST00000475627 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
HLA-DMA-207ENST00000475627 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
HLA-DMA-207ENST00000475627 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
HLA-DMA-207ENST00000475627 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
HLA-DMA-207ENST00000475627 KRTAP8-1Q8IUC2 63 aa3.19□□□□□ -1.9
HLA-DMA-207ENST00000475627 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
HLA-DMA-207ENST00000475627 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
HLA-DMA-207ENST00000475627 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.91
HLA-DMA-207ENST00000475627 PP632Q6XCG6 107 aa3.15□□□□□ -1.91
HLA-DMA-207ENST00000475627 SYNE2Q8WXH0 6885 aaKnown RBP3.12□□□□□ -1.91
HLA-DMA-207ENST00000475627 INE1O15225 51 aa3.11□□□□□ -1.91
HLA-DMA-207ENST00000475627 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
HLA-DMA-207ENST00000475627 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.91
HLA-DMA-207ENST00000475627 KMT2DO14686 5537 aa3.06□□□□□ -1.92
HLA-DMA-207ENST00000475627 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
HLA-DMA-207ENST00000475627 KRTAP12-3P60328 96 aa3.02□□□□□ -1.93
HLA-DMA-207ENST00000475627 KRTAP19-5Q3LI72 72 aa3.01□□□□□ -1.93
HLA-DMA-207ENST00000475627 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
HLA-DMA-207ENST00000475627 MT1EP04732 61 aa2.99□□□□□ -1.93
HLA-DMA-207ENST00000475627 SPRR2EP22531 72 aa2.99□□□□□ -1.93
HLA-DMA-207ENST00000475627 SPRR2BP35325 72 aa2.99□□□□□ -1.93
HLA-DMA-207ENST00000475627 SPRR2AP35326 72 aa2.99□□□□□ -1.93
HLA-DMA-207ENST00000475627 MUC12Q9UKN1 5478 aa2.95□□□□□ -1.94
HLA-DMA-207ENST00000475627 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
HLA-DMA-207ENST00000475627 MT1GP13640 62 aa2.91□□□□□ -1.94
HLA-DMA-207ENST00000475627 MDN1Q9NU22 5596 aa2.91□□□□□ -1.94
HLA-DMA-207ENST00000475627 NEBP20929 6669 aa2.91□□□□□ -1.94
HLA-DMA-207ENST00000475627 MT1LQ93083 61 aa2.9□□□□□ -1.95
HLA-DMA-207ENST00000475627 SPRR2DP22532 72 aa2.89□□□□□ -1.95
HLA-DMA-207ENST00000475627 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.96
HLA-DMA-207ENST00000475627 MT1MQ8N339 61 aa2.83□□□□□ -1.96
HLA-DMA-207ENST00000475627 KRTAP20-1Q3LI63 56 aa2.81□□□□□ -1.96
HLA-DMA-207ENST00000475627 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
HLA-DMA-207ENST00000475627 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
HLA-DMA-207ENST00000475627 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
HLA-DMA-207ENST00000475627 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
HLA-DMA-207ENST00000475627 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
HLA-DMA-207ENST00000475627 KRTAP2-1Q9BYU5 128 aa2.74□□□□□ -1.97
HLA-DMA-207ENST00000475627 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
HLA-DMA-207ENST00000475627 DSTQ03001 7570 aaKnown RBP2.63□□□□□ -1.99
HLA-DMA-207ENST00000475627 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
HLA-DMA-207ENST00000475627 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
HLA-DMA-207ENST00000475627 MT1AP04731 61 aa2.5□□□□□ -2.01
HLA-DMA-207ENST00000475627 MT4P47944 62 aa2.47□□□□□ -2.01
HLA-DMA-207ENST00000475627 KRTAP6-1Q3LI64 71 aa2.41□□□□□ -2.02
HLA-DMA-207ENST00000475627 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
HLA-DMA-207ENST00000475627 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
HLA-DMA-207ENST00000475627 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
HLA-DMA-207ENST00000475627 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
HLA-DMA-207ENST00000475627 SYNE1Q8NF91 8797 aaKnown RBP2.34□□□□□ -2.04
HLA-DMA-207ENST00000475627 KRTAP6-2Q3LI66 62 aa2.28□□□□□ -2.04
HLA-DMA-207ENST00000475627 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
HLA-DMA-207ENST00000475627 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
HLA-DMA-207ENST00000475627 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
HLA-DMA-207ENST00000475627 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
HLA-DMA-207ENST00000475627 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
HLA-DMA-207ENST00000475627 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
HLA-DMA-207ENST00000475627 PRM1P04553 51 aa1.84□□□□□ -2.11
HLA-DMA-207ENST00000475627 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
HLA-DMA-207ENST00000475627 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
HLA-DMA-207ENST00000475627 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
HLA-DMA-207ENST00000475627 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
HLA-DMA-207ENST00000475627 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
HLA-DMA-207ENST00000475627 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
HLA-DMA-207ENST00000475627 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 95.5 ms