RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 TNP1P09430 55 aa6.81□□□□□ -1.32
VPS36-203ENST00000475375 KRTAP12-4P60329 112 aa6.75□□□□□ -1.33
VPS36-203ENST00000475375 KRTAP5-5Q701N2 237 aaPredicted RBP6.72□□□□□ -1.33
VPS36-203ENST00000475375 SMIM26A0A096LP01 95 aa6.7□□□□□ -1.34
VPS36-203ENST00000475375 KRTAP12-3P60328 96 aa6.67□□□□□ -1.34
VPS36-203ENST00000475375 A8MU10 97 aa6.65□□□□□ -1.34
VPS36-203ENST00000475375 SERP2Q8N6R1 65 aa6.6□□□□□ -1.35
VPS36-203ENST00000475375 SYNE1Q8NF91 8797 aaKnown RBP6.58□□□□□ -1.36
VPS36-203ENST00000475375 LOC100996750A0A140TA64 210 aa6.53□□□□□ -1.36
VPS36-203ENST00000475375 A0A1B0GU69 56 aa6.52□□□□□ -1.37
VPS36-203ENST00000475375 K7ERU9 68 aa6.46□□□□□ -1.38
VPS36-203ENST00000475375 KRTAP4-11Q9BYQ6 195 aa6.45□□□□□ -1.38
VPS36-203ENST00000475375 AHNAKQ09666 5890 aaKnown RBP6.4□□□□□ -1.38
VPS36-203ENST00000475375 MUC5ACP98088 5654 aa6.34□□□□□ -1.4
VPS36-203ENST00000475375 MUC5BQ9HC84 5762 aaPredicted RBP6.27□□□□□ -1.41
VPS36-203ENST00000475375 H7BZZ5 65 aa6.25□□□□□ -1.41
VPS36-203ENST00000475375 KRTAP5-2Q701N4 177 aa6.25□□□□□ -1.41
VPS36-203ENST00000475375 KRTAP5-8O75690 187 aa6.24□□□□□ -1.41
VPS36-203ENST00000475375 COX7CP15954 63 aa6.21□□□□□ -1.42
VPS36-203ENST00000475375 KRTAP19-4Q3LI73 84 aa6.18□□□□□ -1.42
VPS36-203ENST00000475375 PRR15LQ9BU68 103 aa6.17□□□□□ -1.42
VPS36-203ENST00000475375 KRTAP6-1Q3LI64 71 aa6.13□□□□□ -1.43
VPS36-203ENST00000475375 MT1AP04731 61 aa6.12□□□□□ -1.43
VPS36-203ENST00000475375 KRTAP25-1Q3LHN0 102 aa6.12□□□□□ -1.43
VPS36-203ENST00000475375 OBSCNQ5VST9 7968 aa6.09□□□□□ -1.43
VPS36-203ENST00000475375 LCE3CQ5T5A8 94 aa6.08□□□□□ -1.44
VPS36-203ENST00000475375 KRTAP9-9Q9BYP9 154 aa6.05□□□□□ -1.44
VPS36-203ENST00000475375 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
VPS36-203ENST00000475375 KRTAP6-2Q3LI66 62 aa5.99□□□□□ -1.45
VPS36-203ENST00000475375 KRTAP9-4Q9BYQ2 154 aa5.97□□□□□ -1.45
VPS36-203ENST00000475375 UQCR11O14957 56 aa5.92□□□□□ -1.46
VPS36-203ENST00000475375 LINC01558Q9Y6Z2 57 aa5.92□□□□□ -1.46
VPS36-203ENST00000475375 ANAPC13Q9BS18 74 aa5.83□□□□□ -1.48
VPS36-203ENST00000475375 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
VPS36-203ENST00000475375 K7ERS5 55 aa5.79□□□□□ -1.48
VPS36-203ENST00000475375 CCDC179H3BU77 68 aa5.75□□□□□ -1.49
VPS36-203ENST00000475375 MIR22HGQ0VDD5 57 aa5.75□□□□□ -1.49
VPS36-203ENST00000475375 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
VPS36-203ENST00000475375 ATP5EP56381 51 aaPredicted RBP5.71□□□□□ -1.5
VPS36-203ENST00000475375 KRTAP5-1Q6L8H4 278 aa5.71□□□□□ -1.5
VPS36-203ENST00000475375 MT3P25713 68 aa5.64□□□□□ -1.51
VPS36-203ENST00000475375 RPS28P62857 69 aaKnown RBP5.5□□□□□ -1.53
VPS36-203ENST00000475375 PCP4P48539 62 aa5.49□□□□□ -1.53
VPS36-203ENST00000475375 TMEM258P61165 79 aa5.49□□□□□ -1.53
VPS36-203ENST00000475375 CDC42SE1Q9NRR8 79 aa5.38□□□□□ -1.55
VPS36-203ENST00000475375 PSPHP1O15172 72 aa5.35□□□□□ -1.55
VPS36-203ENST00000475375 Q1T7F1 81 aa5.3□□□□□ -1.56
VPS36-203ENST00000475375 LCE1EQ5T753 118 aa5.28□□□□□ -1.56
VPS36-203ENST00000475375 ROMO1P60602 79 aa5.24□□□□□ -1.57
VPS36-203ENST00000475375 V9GYY9 64 aa5.2□□□□□ -1.58
VPS36-203ENST00000475375 A6NED7 52 aa5.13□□□□□ -1.59
VPS36-203ENST00000475375 LCE1BQ5T7P3 118 aa5.1□□□□□ -1.59
VPS36-203ENST00000475375 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
VPS36-203ENST00000475375 LCE1CQ5T751 118 aa4.9□□□□□ -1.63
VPS36-203ENST00000475375 KRTAP4-12Q9BQ66 201 aa4.84□□□□□ -1.63
VPS36-203ENST00000475375 BRK1Q8WUW1 75 aa4.59□□□□□ -1.67
VPS36-203ENST00000475375 H3BS24 57 aa4.53□□□□□ -1.68
VPS36-203ENST00000475375 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
VPS36-203ENST00000475375 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
VPS36-203ENST00000475375 PHGR1C9JFL3 82 aa4.38□□□□□ -1.71
VPS36-203ENST00000475375 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
VPS36-203ENST00000475375 PMAIP1Q13794 54 aa4.34□□□□□ -1.71
VPS36-203ENST00000475375 PRO0628Q9UI54 55 aa4.32□□□□□ -1.72
VPS36-203ENST00000475375 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
VPS36-203ENST00000475375 PRAC1Q96KF2 57 aa4.13□□□□□ -1.75
VPS36-203ENST00000475375 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
VPS36-203ENST00000475375 KRTAP21-2Q3LI59 83 aa4.02□□□□□ -1.77
VPS36-203ENST00000475375 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
VPS36-203ENST00000475375 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
VPS36-203ENST00000475375 SVIPQ8NHG7 77 aa3.78□□□□□ -1.8
VPS36-203ENST00000475375 MUC19Q7Z5P9 8384 aa3.77□□□□□ -1.81
VPS36-203ENST00000475375 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
VPS36-203ENST00000475375 KRTAP21-1Q3LI58 79 aa3.31□□□□□ -1.88
VPS36-203ENST00000475375 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
VPS36-203ENST00000475375 A0A0A0MQY5 61 aa2.72□□□□□ -1.97
VPS36-203ENST00000475375 PRM1P04553 51 aa2.66□□□□□ -1.98
VPS36-203ENST00000475375 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
VPS36-203ENST00000475375 INE1O15225 51 aa2.5□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 140.3 ms