RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
PCCB-213ENST00000475214 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
PCCB-213ENST00000475214 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
PCCB-213ENST00000475214 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
PCCB-213ENST00000475214 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
PCCB-213ENST00000475214 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
PCCB-213ENST00000475214 KRTAP12-3P60328 96 aa3.87□□□□□ -1.79
PCCB-213ENST00000475214 KMT2DO14686 5537 aa3.87□□□□□ -1.79
PCCB-213ENST00000475214 KRTAP4-8A0A0G2JLE6 195 aa3.86□□□□□ -1.79
PCCB-213ENST00000475214 LCE3BQ5TA77 95 aa3.85□□□□□ -1.79
PCCB-213ENST00000475214 MDN1Q9NU22 5596 aa3.84□□□□□ -1.79
PCCB-213ENST00000475214 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
PCCB-213ENST00000475214 SPRR2EP22531 72 aa3.82□□□□□ -1.8
PCCB-213ENST00000475214 SPRR2BP35325 72 aa3.82□□□□□ -1.8
PCCB-213ENST00000475214 SPRR2AP35326 72 aa3.82□□□□□ -1.8
PCCB-213ENST00000475214 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
PCCB-213ENST00000475214 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
PCCB-213ENST00000475214 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
PCCB-213ENST00000475214 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
PCCB-213ENST00000475214 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
PCCB-213ENST00000475214 SPRR2DP22532 72 aa3.7□□□□□ -1.82
PCCB-213ENST00000475214 MT1EP04732 61 aa3.69□□□□□ -1.82
PCCB-213ENST00000475214 LCE5AQ5TCM9 118 aa3.67□□□□□ -1.82
PCCB-213ENST00000475214 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
PCCB-213ENST00000475214 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
PCCB-213ENST00000475214 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
PCCB-213ENST00000475214 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
PCCB-213ENST00000475214 MT1LQ93083 61 aa3.62□□□□□ -1.83
PCCB-213ENST00000475214 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
PCCB-213ENST00000475214 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
PCCB-213ENST00000475214 MT1GP13640 62 aa3.53□□□□□ -1.84
PCCB-213ENST00000475214 KRTAP4-9Q9BYQ8 210 aa3.49□□□□□ -1.85
PCCB-213ENST00000475214 KRTAP4-7Q9BYR0 210 aa3.49□□□□□ -1.85
PCCB-213ENST00000475214 MT1MQ8N339 61 aa3.48□□□□□ -1.85
PCCB-213ENST00000475214 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
PCCB-213ENST00000475214 DSTQ03001 7570 aaKnown RBP3.43□□□□□ -1.86
PCCB-213ENST00000475214 KRTAP4-11Q9BYQ6 195 aa3.43□□□□□ -1.86
PCCB-213ENST00000475214 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
PCCB-213ENST00000475214 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
PCCB-213ENST00000475214 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
PCCB-213ENST00000475214 MT4P47944 62 aa3.25□□□□□ -1.89
PCCB-213ENST00000475214 KRTAP5-10Q6L8G5 202 aa3.24□□□□□ -1.89
PCCB-213ENST00000475214 KRTAP5-4Q6L8H1 288 aa3.17□□□□□ -1.9
PCCB-213ENST00000475214 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
PCCB-213ENST00000475214 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.91
PCCB-213ENST00000475214 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
PCCB-213ENST00000475214 MT1AP04731 61 aa3.1□□□□□ -1.91
PCCB-213ENST00000475214 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
PCCB-213ENST00000475214 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
PCCB-213ENST00000475214 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
PCCB-213ENST00000475214 MT3P25713 68 aa3.03□□□□□ -1.92
PCCB-213ENST00000475214 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
PCCB-213ENST00000475214 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
PCCB-213ENST00000475214 INE1O15225 51 aa2.95□□□□□ -1.94
PCCB-213ENST00000475214 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
PCCB-213ENST00000475214 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
PCCB-213ENST00000475214 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
PCCB-213ENST00000475214 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
PCCB-213ENST00000475214 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
PCCB-213ENST00000475214 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
PCCB-213ENST00000475214 LCE3EQ5T5B0 92 aa2.67□□□□□ -1.98
PCCB-213ENST00000475214 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
PCCB-213ENST00000475214 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
PCCB-213ENST00000475214 OBSCNQ5VST9 7968 aa2.59□□□□□ -1.99
PCCB-213ENST00000475214 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
PCCB-213ENST00000475214 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
PCCB-213ENST00000475214 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
PCCB-213ENST00000475214 PRM1P04553 51 aa2.34□□□□□ -2.03
PCCB-213ENST00000475214 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
PCCB-213ENST00000475214 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
PCCB-213ENST00000475214 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
PCCB-213ENST00000475214 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
PCCB-213ENST00000475214 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
PCCB-213ENST00000475214 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
PCCB-213ENST00000475214 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
PCCB-213ENST00000475214 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
PCCB-213ENST00000475214 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
PCCB-213ENST00000475214 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 114.1 ms