RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 KRTAP12-1P59990 96 aa4.57□□□□□ -1.68
SSR1-205ENST00000475213 MT1EP04732 61 aa4.56□□□□□ -1.68
SSR1-205ENST00000475213 KRTAP19-3Q7Z4W3 81 aa4.54□□□□□ -1.68
SSR1-205ENST00000475213 A0A1B0GU69 56 aa4.52□□□□□ -1.69
SSR1-205ENST00000475213 ANAPC13Q9BS18 74 aa4.5□□□□□ -1.69
SSR1-205ENST00000475213 SMIM26A0A096LP01 95 aa4.49□□□□□ -1.69
SSR1-205ENST00000475213 KRTAP19-5Q3LI72 72 aa4.48□□□□□ -1.69
SSR1-205ENST00000475213 A8MU10 97 aa4.47□□□□□ -1.69
SSR1-205ENST00000475213 CCDC179H3BU77 68 aa4.42□□□□□ -1.7
SSR1-205ENST00000475213 MT1GP13640 62 aa4.42□□□□□ -1.7
SSR1-205ENST00000475213 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.7
SSR1-205ENST00000475213 C10orf95Q9H7T3 257 aa4.38□□□□□ -1.71
SSR1-205ENST00000475213 ATP5EP56381 51 aaPredicted RBP4.37□□□□□ -1.71
SSR1-205ENST00000475213 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
SSR1-205ENST00000475213 TNP1P09430 55 aa4.36□□□□□ -1.71
SSR1-205ENST00000475213 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
SSR1-205ENST00000475213 MT1LQ93083 61 aa4.36□□□□□ -1.71
SSR1-205ENST00000475213 PRR15LQ9BU68 103 aa4.36□□□□□ -1.71
SSR1-205ENST00000475213 MT1MQ8N339 61 aa4.35□□□□□ -1.71
SSR1-205ENST00000475213 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
SSR1-205ENST00000475213 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
SSR1-205ENST00000475213 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
SSR1-205ENST00000475213 TMEM258P61165 79 aa4.24□□□□□ -1.73
SSR1-205ENST00000475213 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
SSR1-205ENST00000475213 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
SSR1-205ENST00000475213 UQCR11O14957 56 aa4.22□□□□□ -1.73
SSR1-205ENST00000475213 MT4P47944 62 aa4.21□□□□□ -1.74
SSR1-205ENST00000475213 KRTAP12-3P60328 96 aa4.19□□□□□ -1.74
SSR1-205ENST00000475213 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
SSR1-205ENST00000475213 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
SSR1-205ENST00000475213 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
SSR1-205ENST00000475213 MIR22HGQ0VDD5 57 aa4.13□□□□□ -1.75
SSR1-205ENST00000475213 KRTAP25-1Q3LHN0 102 aa4.09□□□□□ -1.75
SSR1-205ENST00000475213 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
SSR1-205ENST00000475213 K7ERS5 55 aa4.04□□□□□ -1.76
SSR1-205ENST00000475213 LCE3CQ5T5A8 94 aa4.04□□□□□ -1.76
SSR1-205ENST00000475213 PSPHP1O15172 72 aa4.03□□□□□ -1.76
SSR1-205ENST00000475213 V9GYY9 64 aa4.02□□□□□ -1.77
SSR1-205ENST00000475213 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
SSR1-205ENST00000475213 Q1T7F1 81 aa4□□□□□ -1.77
SSR1-205ENST00000475213 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
SSR1-205ENST00000475213 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
SSR1-205ENST00000475213 KRTAP5-10Q6L8G5 202 aa3.98□□□□□ -1.77
SSR1-205ENST00000475213 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
SSR1-205ENST00000475213 SPRR5A0A1B0GTR4 108 aa3.9□□□□□ -1.79
SSR1-205ENST00000475213 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
SSR1-205ENST00000475213 A6NED7 52 aa3.88□□□□□ -1.79
SSR1-205ENST00000475213 RPS28P62857 69 aaKnown RBP3.87□□□□□ -1.79
SSR1-205ENST00000475213 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
SSR1-205ENST00000475213 KRTAP5-7Q6L8G8 165 aa3.82□□□□□ -1.8
SSR1-205ENST00000475213 ROMO1P60602 79 aa3.77□□□□□ -1.81
SSR1-205ENST00000475213 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
SSR1-205ENST00000475213 MT1AP04731 61 aa3.7□□□□□ -1.82
SSR1-205ENST00000475213 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
SSR1-205ENST00000475213 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
SSR1-205ENST00000475213 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
SSR1-205ENST00000475213 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
SSR1-205ENST00000475213 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
SSR1-205ENST00000475213 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
SSR1-205ENST00000475213 BRK1Q8WUW1 75 aa3.51□□□□□ -1.85
SSR1-205ENST00000475213 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
SSR1-205ENST00000475213 PMAIP1Q13794 54 aa3.33□□□□□ -1.88
SSR1-205ENST00000475213 PRO0628Q9UI54 55 aa3.33□□□□□ -1.88
SSR1-205ENST00000475213 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
SSR1-205ENST00000475213 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
SSR1-205ENST00000475213 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
SSR1-205ENST00000475213 KTN1-AS1Q86SY8 53 aa3.11□□□□□ -1.91
SSR1-205ENST00000475213 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
SSR1-205ENST00000475213 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
SSR1-205ENST00000475213 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
SSR1-205ENST00000475213 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
SSR1-205ENST00000475213 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
SSR1-205ENST00000475213 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
SSR1-205ENST00000475213 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
SSR1-205ENST00000475213 INE1O15225 51 aa2.01□□□□□ -2.09
SSR1-205ENST00000475213 PRM1P04553 51 aa1.93□□□□□ -2.1
SSR1-205ENST00000475213 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
SSR1-205ENST00000475213 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms