RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 MT1EP04732 61 aa5.09□□□□□ -1.59
SPCS1-204ENST00000474945 ATP5EP56381 51 aaPredicted RBP5.07□□□□□ -1.6
SPCS1-204ENST00000474945 KRTAP19-3Q7Z4W3 81 aa5.04□□□□□ -1.6
SPCS1-204ENST00000474945 PRR15LQ9BU68 103 aa5.04□□□□□ -1.6
SPCS1-204ENST00000474945 KRTAP19-5Q3LI72 72 aa5.01□□□□□ -1.61
SPCS1-204ENST00000474945 TNP1P09430 55 aa4.93□□□□□ -1.62
SPCS1-204ENST00000474945 TMEM258P61165 79 aa4.93□□□□□ -1.62
SPCS1-204ENST00000474945 LINC01558Q9Y6Z2 57 aa4.93□□□□□ -1.62
SPCS1-204ENST00000474945 DSTQ03001 7570 aaKnown RBP4.92□□□□□ -1.62
SPCS1-204ENST00000474945 C10orf95Q9H7T3 257 aa4.92□□□□□ -1.62
SPCS1-204ENST00000474945 LCE3AQ5TA76 89 aa4.91□□□□□ -1.62
SPCS1-204ENST00000474945 PP632Q6XCG6 107 aa4.9□□□□□ -1.63
SPCS1-204ENST00000474945 MT1GP13640 62 aa4.89□□□□□ -1.63
SPCS1-204ENST00000474945 MT1LQ93083 61 aa4.85□□□□□ -1.63
SPCS1-204ENST00000474945 UQCR11O14957 56 aa4.84□□□□□ -1.63
SPCS1-204ENST00000474945 MT1MQ8N339 61 aa4.84□□□□□ -1.63
SPCS1-204ENST00000474945 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
SPCS1-204ENST00000474945 PCP4P48539 62 aa4.8□□□□□ -1.64
SPCS1-204ENST00000474945 MIR22HGQ0VDD5 57 aa4.74□□□□□ -1.65
SPCS1-204ENST00000474945 A0A0A0MQY5 61 aa4.73□□□□□ -1.65
SPCS1-204ENST00000474945 KRTAP4-3Q9BYR4 195 aa4.73□□□□□ -1.65
SPCS1-204ENST00000474945 HMCN1Q96RW7 5635 aa4.72□□□□□ -1.65
SPCS1-204ENST00000474945 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
SPCS1-204ENST00000474945 K7ERS5 55 aa4.68□□□□□ -1.66
SPCS1-204ENST00000474945 MT4P47944 62 aa4.68□□□□□ -1.66
SPCS1-204ENST00000474945 PSPHP1O15172 72 aa4.67□□□□□ -1.66
SPCS1-204ENST00000474945 V9GYY9 64 aa4.65□□□□□ -1.67
SPCS1-204ENST00000474945 KRTAP25-1Q3LHN0 102 aa4.64□□□□□ -1.67
SPCS1-204ENST00000474945 MT3P25713 68 aa4.6□□□□□ -1.67
SPCS1-204ENST00000474945 Q1T7F1 81 aa4.59□□□□□ -1.67
SPCS1-204ENST00000474945 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
SPCS1-204ENST00000474945 KRTAP5-4Q6L8H1 288 aa4.57□□□□□ -1.68
SPCS1-204ENST00000474945 A6NED7 52 aa4.52□□□□□ -1.69
SPCS1-204ENST00000474945 KRTAP5-11Q6L8G4 156 aa4.44□□□□□ -1.7
SPCS1-204ENST00000474945 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
SPCS1-204ENST00000474945 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
SPCS1-204ENST00000474945 KRTAP5-5Q701N2 237 aaPredicted RBP4.41□□□□□ -1.7
SPCS1-204ENST00000474945 KRTAP20-2Q3LI61 65 aa4.35□□□□□ -1.71
SPCS1-204ENST00000474945 ROMO1P60602 79 aa4.34□□□□□ -1.71
SPCS1-204ENST00000474945 KRTAP5-10Q6L8G5 202 aa4.34□□□□□ -1.71
SPCS1-204ENST00000474945 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
SPCS1-204ENST00000474945 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
SPCS1-204ENST00000474945 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
SPCS1-204ENST00000474945 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
SPCS1-204ENST00000474945 RPS28P62857 69 aaKnown RBP4.3□□□□□ -1.72
SPCS1-204ENST00000474945 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
SPCS1-204ENST00000474945 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
SPCS1-204ENST00000474945 KRTAP5-7Q6L8G8 165 aa4.17□□□□□ -1.74
SPCS1-204ENST00000474945 MT1AP04731 61 aa4.13□□□□□ -1.75
SPCS1-204ENST00000474945 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
SPCS1-204ENST00000474945 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
SPCS1-204ENST00000474945 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
SPCS1-204ENST00000474945 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
SPCS1-204ENST00000474945 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
SPCS1-204ENST00000474945 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
SPCS1-204ENST00000474945 BRK1Q8WUW1 75 aa3.87□□□□□ -1.79
SPCS1-204ENST00000474945 KRTAP5-8O75690 187 aa3.82□□□□□ -1.8
SPCS1-204ENST00000474945 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
SPCS1-204ENST00000474945 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
SPCS1-204ENST00000474945 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
SPCS1-204ENST00000474945 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
SPCS1-204ENST00000474945 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
SPCS1-204ENST00000474945 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
SPCS1-204ENST00000474945 PMAIP1Q13794 54 aa3.6□□□□□ -1.83
SPCS1-204ENST00000474945 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
SPCS1-204ENST00000474945 PRO0628Q9UI54 55 aa3.56□□□□□ -1.84
SPCS1-204ENST00000474945 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
SPCS1-204ENST00000474945 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
SPCS1-204ENST00000474945 KTN1-AS1Q86SY8 53 aa3.19□□□□□ -1.9
SPCS1-204ENST00000474945 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
SPCS1-204ENST00000474945 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
SPCS1-204ENST00000474945 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
SPCS1-204ENST00000474945 PHGR1C9JFL3 82 aa2.56□□□□□ -2
SPCS1-204ENST00000474945 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
SPCS1-204ENST00000474945 INE1O15225 51 aa2.24□□□□□ -2.05
SPCS1-204ENST00000474945 PRM1P04553 51 aa2.23□□□□□ -2.05
SPCS1-204ENST00000474945 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
SPCS1-204ENST00000474945 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 69.8 ms