RNA–Protein interactions for RNA: ENST00000474888.1

SNRPCP3-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 3, humanhuman

BASIC

Gene SNRPCP3, Length 476 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP3-201ENST00000474888 KRTAP4-1Q9BYQ7 146 aa1.99□□□□□ -2.09
SNRPCP3-201ENST00000474888 KRTAP9-6A8MVA2 160 aa1.97□□□□□ -2.09
SNRPCP3-201ENST00000474888 KRTAP19-5Q3LI72 72 aa1.97□□□□□ -2.09
SNRPCP3-201ENST00000474888 KRTAP19-8Q3LI54 63 aa1.96□□□□□ -2.1
SNRPCP3-201ENST00000474888 LCE1AQ5T7P2 110 aa1.96□□□□□ -2.1
SNRPCP3-201ENST00000474888 MT1XP80297 61 aa1.94□□□□□ -2.1
SNRPCP3-201ENST00000474888 LPAP08519 4548 aa1.91□□□□□ -2.1
SNRPCP3-201ENST00000474888 LCE5AQ5TCM9 118 aa1.9□□□□□ -2.11
SNRPCP3-201ENST00000474888 MUC17Q685J3 4493 aa1.9□□□□□ -2.11
SNRPCP3-201ENST00000474888 LRP2P98164 4655 aa1.89□□□□□ -2.11
SNRPCP3-201ENST00000474888 LCE4AQ5TA78 99 aa1.87□□□□□ -2.11
SNRPCP3-201ENST00000474888 MT1BP07438 61 aa1.84□□□□□ -2.11
SNRPCP3-201ENST00000474888 SYNE2Q8WXH0 6885 aaKnown RBP1.81□□□□□ -2.12
SNRPCP3-201ENST00000474888 PRM1P04553 51 aa1.81□□□□□ -2.12
SNRPCP3-201ENST00000474888 LCE1EQ5T753 118 aa1.81□□□□□ -2.12
SNRPCP3-201ENST00000474888 MT1AP04731 61 aa1.8□□□□□ -2.12
SNRPCP3-201ENST00000474888 MT1EP04732 61 aa1.8□□□□□ -2.12
SNRPCP3-201ENST00000474888 KRTAP9-3Q9BYQ3 159 aa1.8□□□□□ -2.12
SNRPCP3-201ENST00000474888 MT2AP02795 61 aa1.77□□□□□ -2.13
SNRPCP3-201ENST00000474888 MT1LQ93083 61 aa1.77□□□□□ -2.13
SNRPCP3-201ENST00000474888 MT1FP04733 61 aa1.76□□□□□ -2.13
SNRPCP3-201ENST00000474888 NEBP20929 6669 aa1.76□□□□□ -2.13
SNRPCP3-201ENST00000474888 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
SNRPCP3-201ENST00000474888 KRTAP5-5Q701N2 237 aaPredicted RBP1.75□□□□□ -2.13
SNRPCP3-201ENST00000474888 SSPOA2VEC9 5147 aa1.74□□□□□ -2.13
SNRPCP3-201ENST00000474888 MACF1Q9UPN3 7388 aaKnown RBP1.73□□□□□ -2.13
SNRPCP3-201ENST00000474888 KRTAP20-1Q3LI63 56 aa1.72□□□□□ -2.13
SNRPCP3-201ENST00000474888 KRTAP19-7Q3SYF9 63 aa1.71□□□□□ -2.14
SNRPCP3-201ENST00000474888 LCE1FQ5T754 118 aa1.7□□□□□ -2.14
SNRPCP3-201ENST00000474888 LCE3DQ9BYE3 92 aa1.7□□□□□ -2.14
SNRPCP3-201ENST00000474888 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
SNRPCP3-201ENST00000474888 MT1HP80294 61 aa1.67□□□□□ -2.14
SNRPCP3-201ENST00000474888 FCGBPQ9Y6R7 5405 aaPredicted RBP1.66□□□□□ -2.14
SNRPCP3-201ENST00000474888 MT3P25713 68 aa1.64□□□□□ -2.15
SNRPCP3-201ENST00000474888 USH2AO75445 5202 aa1.64□□□□□ -2.15
SNRPCP3-201ENST00000474888 KRTAP6-2Q3LI66 62 aa1.61□□□□□ -2.15
SNRPCP3-201ENST00000474888 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
SNRPCP3-201ENST00000474888 MT1GP13640 62 aa1.6□□□□□ -2.15
SNRPCP3-201ENST00000474888 SPRR2FQ96RM1 72 aa1.59□□□□□ -2.15
SNRPCP3-201ENST00000474888 SYNE1Q8NF91 8797 aaKnown RBP1.57□□□□□ -2.16
SNRPCP3-201ENST00000474888 KMT2DO14686 5537 aa1.57□□□□□ -2.16
SNRPCP3-201ENST00000474888 MUC12Q9UKN1 5478 aa1.56□□□□□ -2.16
SNRPCP3-201ENST00000474888 SPRR2AP35326 72 aa1.54□□□□□ -2.16
SNRPCP3-201ENST00000474888 MT1MQ8N339 61 aa1.52□□□□□ -2.17
SNRPCP3-201ENST00000474888 SPRR2BP35325 72 aa1.51□□□□□ -2.17
SNRPCP3-201ENST00000474888 KRTAP4-3Q9BYR4 195 aa1.49□□□□□ -2.17
SNRPCP3-201ENST00000474888 SPRR2DP22532 72 aa1.47□□□□□ -2.17
SNRPCP3-201ENST00000474888 SPRR2EP22531 72 aa1.46□□□□□ -2.18
SNRPCP3-201ENST00000474888 KRTAP19-3Q7Z4W3 81 aa1.46□□□□□ -2.18
SNRPCP3-201ENST00000474888 KRTAP5-9P26371 169 aa1.44□□□□□ -2.18
SNRPCP3-201ENST00000474888 KRTAP6-1Q3LI64 71 aa1.43□□□□□ -2.18
SNRPCP3-201ENST00000474888 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
SNRPCP3-201ENST00000474888 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.19
SNRPCP3-201ENST00000474888 KRTAP19-6Q3LI70 58 aa1.4□□□□□ -2.19
SNRPCP3-201ENST00000474888 MDN1Q9NU22 5596 aa1.4□□□□□ -2.19
SNRPCP3-201ENST00000474888 DSTQ03001 7570 aaKnown RBP1.38□□□□□ -2.19
SNRPCP3-201ENST00000474888 KRTAP5-10Q6L8G5 202 aa1.38□□□□□ -2.19
SNRPCP3-201ENST00000474888 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
SNRPCP3-201ENST00000474888 KRTAP5-4Q6L8H1 288 aa1.38□□□□□ -2.19
SNRPCP3-201ENST00000474888 KRTAP5-1Q6L8H4 278 aa1.35□□□□□ -2.19
SNRPCP3-201ENST00000474888 KRTAP4-4Q9BYR3 166 aa1.33□□□□□ -2.2
SNRPCP3-201ENST00000474888 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
SNRPCP3-201ENST00000474888 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
SNRPCP3-201ENST00000474888 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
SNRPCP3-201ENST00000474888 LCE1CQ5T751 118 aa1.24□□□□□ -2.21
SNRPCP3-201ENST00000474888 LCE1BQ5T7P3 118 aa1.24□□□□□ -2.21
SNRPCP3-201ENST00000474888 MUC5BQ9HC84 5762 aaPredicted RBP1.21□□□□□ -2.22
SNRPCP3-201ENST00000474888 OBSCNQ5VST9 7968 aa1.2□□□□□ -2.22
SNRPCP3-201ENST00000474888 KRTAP5-2Q701N4 177 aa1.18□□□□□ -2.22
SNRPCP3-201ENST00000474888 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
SNRPCP3-201ENST00000474888 MT4P47944 62 aa1.17□□□□□ -2.22
SNRPCP3-201ENST00000474888 KRTAP5-8O75690 187 aa1.09□□□□□ -2.23
SNRPCP3-201ENST00000474888 KRTAP20-2Q3LI61 65 aa0.97□□□□□ -2.25
SNRPCP3-201ENST00000474888 KRTAP21-2Q3LI59 83 aa0.93□□□□□ -2.26
SNRPCP3-201ENST00000474888 MUC19Q7Z5P9 8384 aa0.89□□□□□ -2.27
SNRPCP3-201ENST00000474888 PHGR1C9JFL3 82 aa0.83□□□□□ -2.28
SNRPCP3-201ENST00000474888 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 147.9 ms