RNA–Protein interactions for RNA: ENST00000474802.1

PREB-209, Transcript of prolactin regulatory element binding, humanhuman

TSL 5

Gene PREB, Length 1,283 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-209ENST00000474802 KRTAP2-1Q9BYU5 128 aa7.05□□□□□ -1.28
PREB-209ENST00000474802 LCE3BQ5TA77 95 aa7.03□□□□□ -1.28
PREB-209ENST00000474802 KRTAP25-1Q3LHN0 102 aa6.99□□□□□ -1.29
PREB-209ENST00000474802 MT1GP13640 62 aa6.96□□□□□ -1.3
PREB-209ENST00000474802 MT1LQ93083 61 aa6.94□□□□□ -1.3
PREB-209ENST00000474802 PP632Q6XCG6 107 aa6.88□□□□□ -1.31
PREB-209ENST00000474802 KRTAP12-3P60328 96 aa6.86□□□□□ -1.31
PREB-209ENST00000474802 CDC42SE1Q9NRR8 79 aa6.85□□□□□ -1.31
PREB-209ENST00000474802 MT1MQ8N339 61 aa6.84□□□□□ -1.31
PREB-209ENST00000474802 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
PREB-209ENST00000474802 DSTQ03001 7570 aaKnown RBP6.73□□□□□ -1.33
PREB-209ENST00000474802 ROMO1P60602 79 aa6.72□□□□□ -1.33
PREB-209ENST00000474802 KRTAP4-3Q9BYR4 195 aa6.66□□□□□ -1.34
PREB-209ENST00000474802 BRK1Q8WUW1 75 aa6.61□□□□□ -1.35
PREB-209ENST00000474802 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
PREB-209ENST00000474802 KRTAP19-4Q3LI73 84 aa6.53□□□□□ -1.36
PREB-209ENST00000474802 KRTAP15-1Q3LI76 137 aa6.51□□□□□ -1.37
PREB-209ENST00000474802 KRTAP4-9Q9BYQ8 210 aa6.45□□□□□ -1.38
PREB-209ENST00000474802 LCE4AQ5TA78 99 aa6.44□□□□□ -1.38
PREB-209ENST00000474802 KRTAP5-4Q6L8H1 288 aa6.39□□□□□ -1.39
PREB-209ENST00000474802 PRO0628Q9UI54 55 aa6.36□□□□□ -1.39
PREB-209ENST00000474802 LCE3CQ5T5A8 94 aa6.35□□□□□ -1.39
PREB-209ENST00000474802 LCE1DQ5T752 114 aa6.35□□□□□ -1.39
PREB-209ENST00000474802 MT4P47944 62 aa6.3□□□□□ -1.4
PREB-209ENST00000474802 KRTAP5-5Q701N2 237 aaPredicted RBP6.27□□□□□ -1.41
PREB-209ENST00000474802 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
PREB-209ENST00000474802 LOC100996750A0A140TA64 210 aa6.23□□□□□ -1.41
PREB-209ENST00000474802 HMCN1Q96RW7 5635 aa6.18□□□□□ -1.42
PREB-209ENST00000474802 KRTAP4-6Q9BYQ5 205 aa6.17□□□□□ -1.42
PREB-209ENST00000474802 GPR98Q8WXG9 6306 aa6.12□□□□□ -1.43
PREB-209ENST00000474802 KRTAP12-4P60329 112 aa6.01□□□□□ -1.45
PREB-209ENST00000474802 SPRR5A0A1B0GTR4 108 aa6□□□□□ -1.45
PREB-209ENST00000474802 KRTAP9-6A8MVA2 160 aa5.99□□□□□ -1.45
PREB-209ENST00000474802 KRTAP20-2Q3LI61 65 aa5.99□□□□□ -1.45
PREB-209ENST00000474802 SYNE1Q8NF91 8797 aaKnown RBP5.96□□□□□ -1.46
PREB-209ENST00000474802 KTN1-AS1Q86SY8 53 aa5.93□□□□□ -1.46
PREB-209ENST00000474802 MT1AP04731 61 aa5.91□□□□□ -1.46
PREB-209ENST00000474802 AHNAK2Q8IVF2 5795 aa5.85□□□□□ -1.47
PREB-209ENST00000474802 KRTAP6-1Q3LI64 71 aa5.85□□□□□ -1.47
PREB-209ENST00000474802 KRTAP5-3Q6L8H2 238 aa5.82□□□□□ -1.48
PREB-209ENST00000474802 PRAC1Q96KF2 57 aa5.79□□□□□ -1.48
PREB-209ENST00000474802 KRTAP5-10Q6L8G5 202 aa5.78□□□□□ -1.48
PREB-209ENST00000474802 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
PREB-209ENST00000474802 KRTAP5-2Q701N4 177 aa5.65□□□□□ -1.5
PREB-209ENST00000474802 SVIPQ8NHG7 77 aa5.62□□□□□ -1.51
PREB-209ENST00000474802 KRTAP6-2Q3LI66 62 aa5.53□□□□□ -1.52
PREB-209ENST00000474802 KRTAP5-7Q6L8G8 165 aa5.51□□□□□ -1.53
PREB-209ENST00000474802 KRTAP4-11Q9BYQ6 195 aa5.4□□□□□ -1.54
PREB-209ENST00000474802 MT3P25713 68 aa5.38□□□□□ -1.55
PREB-209ENST00000474802 KRTAP5-8O75690 187 aa5.22□□□□□ -1.57
PREB-209ENST00000474802 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
PREB-209ENST00000474802 KRTAP5-1Q6L8H4 278 aa5.01□□□□□ -1.61
PREB-209ENST00000474802 LUZP6Q538Z0 58 aa4.92□□□□□ -1.62
PREB-209ENST00000474802 LCE1EQ5T753 118 aa4.89□□□□□ -1.63
PREB-209ENST00000474802 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
PREB-209ENST00000474802 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
PREB-209ENST00000474802 MUC5BQ9HC84 5762 aaPredicted RBP4.75□□□□□ -1.65
PREB-209ENST00000474802 AHNAKQ09666 5890 aaKnown RBP4.72□□□□□ -1.65
PREB-209ENST00000474802 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
PREB-209ENST00000474802 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
PREB-209ENST00000474802 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
PREB-209ENST00000474802 LCE1CQ5T751 118 aa4.54□□□□□ -1.68
PREB-209ENST00000474802 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
PREB-209ENST00000474802 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.71
PREB-209ENST00000474802 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
PREB-209ENST00000474802 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
PREB-209ENST00000474802 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
PREB-209ENST00000474802 A0A0A0MQY5 61 aa4.02□□□□□ -1.77
PREB-209ENST00000474802 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
PREB-209ENST00000474802 KRTAP21-2Q3LI59 83 aa3.86□□□□□ -1.79
PREB-209ENST00000474802 INE1O15225 51 aa3.81□□□□□ -1.8
PREB-209ENST00000474802 H3BS24 57 aa3.54□□□□□ -1.84
PREB-209ENST00000474802 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
PREB-209ENST00000474802 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
PREB-209ENST00000474802 PRM1P04553 51 aa3.45□□□□□ -1.86
PREB-209ENST00000474802 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
PREB-209ENST00000474802 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
PREB-209ENST00000474802 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms