RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 COA5Q86WW8 74 aa4.82□□□□□ -1.64
EPCAM-205ENST00000474691 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
EPCAM-205ENST00000474691 KRTAP12-1P59990 96 aa4.79□□□□□ -1.64
EPCAM-205ENST00000474691 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
EPCAM-205ENST00000474691 C10orf95Q9H7T3 257 aa4.78□□□□□ -1.64
EPCAM-205ENST00000474691 AHNAK2Q8IVF2 5795 aa4.77□□□□□ -1.65
EPCAM-205ENST00000474691 TNP1P09430 55 aa4.76□□□□□ -1.65
EPCAM-205ENST00000474691 SMIM26A0A096LP01 95 aa4.75□□□□□ -1.65
EPCAM-205ENST00000474691 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
EPCAM-205ENST00000474691 KRTAP5-7Q6L8G8 165 aa4.72□□□□□ -1.65
EPCAM-205ENST00000474691 SERP2Q8N6R1 65 aa4.72□□□□□ -1.65
EPCAM-205ENST00000474691 K7ERU9 68 aa4.71□□□□□ -1.66
EPCAM-205ENST00000474691 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
EPCAM-205ENST00000474691 A0A1B0GU69 56 aa4.65□□□□□ -1.67
EPCAM-205ENST00000474691 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.64□□□□□ -1.67
EPCAM-205ENST00000474691 A8MU10 97 aa4.61□□□□□ -1.67
EPCAM-205ENST00000474691 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
EPCAM-205ENST00000474691 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
EPCAM-205ENST00000474691 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
EPCAM-205ENST00000474691 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
EPCAM-205ENST00000474691 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
EPCAM-205ENST00000474691 COX7CP15954 63 aa4.48□□□□□ -1.69
EPCAM-205ENST00000474691 KRTAP5-5Q701N2 237 aaPredicted RBP4.47□□□□□ -1.69
EPCAM-205ENST00000474691 PRR15LQ9BU68 103 aa4.47□□□□□ -1.69
EPCAM-205ENST00000474691 H7BZZ5 65 aa4.43□□□□□ -1.7
EPCAM-205ENST00000474691 MT3P25713 68 aa4.39□□□□□ -1.71
EPCAM-205ENST00000474691 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
EPCAM-205ENST00000474691 SYNE1Q8NF91 8797 aaKnown RBP4.3□□□□□ -1.72
EPCAM-205ENST00000474691 UQCR11O14957 56 aa4.26□□□□□ -1.73
EPCAM-205ENST00000474691 K7ERS5 55 aa4.23□□□□□ -1.73
EPCAM-205ENST00000474691 LINC01558Q9Y6Z2 57 aa4.22□□□□□ -1.73
EPCAM-205ENST00000474691 ANAPC13Q9BS18 74 aa4.19□□□□□ -1.74
EPCAM-205ENST00000474691 ATP5EP56381 51 aaPredicted RBP4.18□□□□□ -1.74
EPCAM-205ENST00000474691 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
EPCAM-205ENST00000474691 MT1AP04731 61 aa4.15□□□□□ -1.75
EPCAM-205ENST00000474691 KRTAP5-2Q701N4 177 aa4.14□□□□□ -1.75
EPCAM-205ENST00000474691 KRTAP5-8O75690 187 aa4.13□□□□□ -1.75
EPCAM-205ENST00000474691 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
EPCAM-205ENST00000474691 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
EPCAM-205ENST00000474691 CCDC179H3BU77 68 aa4.04□□□□□ -1.76
EPCAM-205ENST00000474691 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
EPCAM-205ENST00000474691 KRTAP5-1Q6L8H4 278 aa4.01□□□□□ -1.77
EPCAM-205ENST00000474691 MUC5ACP98088 5654 aa4□□□□□ -1.77
EPCAM-205ENST00000474691 AHNAKQ09666 5890 aaKnown RBP3.95□□□□□ -1.78
EPCAM-205ENST00000474691 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
EPCAM-205ENST00000474691 MUC5BQ9HC84 5762 aaPredicted RBP3.94□□□□□ -1.78
EPCAM-205ENST00000474691 TMEM258P61165 79 aa3.92□□□□□ -1.78
EPCAM-205ENST00000474691 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
EPCAM-205ENST00000474691 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
EPCAM-205ENST00000474691 CDC42SE1Q9NRR8 79 aa3.89□□□□□ -1.79
EPCAM-205ENST00000474691 PSPHP1O15172 72 aa3.85□□□□□ -1.79
EPCAM-205ENST00000474691 V9GYY9 64 aa3.85□□□□□ -1.79
EPCAM-205ENST00000474691 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
EPCAM-205ENST00000474691 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
EPCAM-205ENST00000474691 Q1T7F1 81 aa3.81□□□□□ -1.8
EPCAM-205ENST00000474691 A6NED7 52 aa3.76□□□□□ -1.81
EPCAM-205ENST00000474691 ROMO1P60602 79 aa3.76□□□□□ -1.81
EPCAM-205ENST00000474691 PCP4P48539 62 aa3.72□□□□□ -1.81
EPCAM-205ENST00000474691 A0A0A0MQY5 61 aa3.68□□□□□ -1.82
EPCAM-205ENST00000474691 SVIPQ8NHG7 77 aa3.63□□□□□ -1.83
EPCAM-205ENST00000474691 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
EPCAM-205ENST00000474691 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
EPCAM-205ENST00000474691 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
EPCAM-205ENST00000474691 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
EPCAM-205ENST00000474691 PRAC1Q96KF2 57 aa3.02□□□□□ -1.93
EPCAM-205ENST00000474691 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
EPCAM-205ENST00000474691 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
EPCAM-205ENST00000474691 BRK1Q8WUW1 75 aa2.84□□□□□ -1.95
EPCAM-205ENST00000474691 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
EPCAM-205ENST00000474691 PMAIP1Q13794 54 aa2.65□□□□□ -1.99
EPCAM-205ENST00000474691 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
EPCAM-205ENST00000474691 LUZP6Q538Z0 58 aa2.4□□□□□ -2.03
EPCAM-205ENST00000474691 PRO0628Q9UI54 55 aa2.24□□□□□ -2.05
EPCAM-205ENST00000474691 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
EPCAM-205ENST00000474691 KTN1-AS1Q86SY8 53 aa2.1□□□□□ -2.07
EPCAM-205ENST00000474691 PRM1P04553 51 aa1.89□□□□□ -2.11
EPCAM-205ENST00000474691 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
EPCAM-205ENST00000474691 INE1O15225 51 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 54.5 ms