RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 SPRR2EP22531 72 aa7.56□□□□□ -1.2
CDHR3-210ENST00000474330 SPRR2BP35325 72 aa7.56□□□□□ -1.2
CDHR3-210ENST00000474330 SPRR2AP35326 72 aa7.56□□□□□ -1.2
CDHR3-210ENST00000474330 KRTAP19-7Q3SYF9 63 aa7.56□□□□□ -1.2
CDHR3-210ENST00000474330 LCE1AQ5T7P2 110 aa7.53□□□□□ -1.2
CDHR3-210ENST00000474330 KRTAP2-3P0C7H8 128 aa7.44□□□□□ -1.22
CDHR3-210ENST00000474330 KRTAP2-4Q9BYR9 128 aa7.44□□□□□ -1.22
CDHR3-210ENST00000474330 MT1EP04732 61 aa7.43□□□□□ -1.22
CDHR3-210ENST00000474330 KRTAP15-1Q3LI76 137 aa7.4□□□□□ -1.22
CDHR3-210ENST00000474330 SPRR2DP22532 72 aa7.3□□□□□ -1.24
CDHR3-210ENST00000474330 MT1LQ93083 61 aa7.26□□□□□ -1.25
CDHR3-210ENST00000474330 KRTAP2-2Q9BYT5 123 aa7.21□□□□□ -1.26
CDHR3-210ENST00000474330 KRTAP2-1Q9BYU5 128 aa7.21□□□□□ -1.26
CDHR3-210ENST00000474330 KRTAP19-4Q3LI73 84 aa7.18□□□□□ -1.26
CDHR3-210ENST00000474330 KRTAP19-3Q7Z4W3 81 aa7.18□□□□□ -1.26
CDHR3-210ENST00000474330 MT1GP13640 62 aa7.12□□□□□ -1.27
CDHR3-210ENST00000474330 LCE3BQ5TA77 95 aa7.12□□□□□ -1.27
CDHR3-210ENST00000474330 LCE5AQ5TCM9 118 aa7.09□□□□□ -1.28
CDHR3-210ENST00000474330 LCE3CQ5T5A8 94 aa7.08□□□□□ -1.28
CDHR3-210ENST00000474330 DSTQ03001 7570 aaKnown RBP7.01□□□□□ -1.29
CDHR3-210ENST00000474330 MT1MQ8N339 61 aa7.01□□□□□ -1.29
CDHR3-210ENST00000474330 KRTAP4-7Q9BYR0 210 aa6.98□□□□□ -1.29
CDHR3-210ENST00000474330 SPRR5A0A1B0GTR4 108 aa6.93□□□□□ -1.3
CDHR3-210ENST00000474330 KRTAP4-3Q9BYR4 195 aa6.83□□□□□ -1.32
CDHR3-210ENST00000474330 H3BS24 57 aa6.78□□□□□ -1.32
CDHR3-210ENST00000474330 KRTAP9-6A8MVA2 160 aa6.68□□□□□ -1.34
CDHR3-210ENST00000474330 KRTAP4-9Q9BYQ8 210 aa6.64□□□□□ -1.35
CDHR3-210ENST00000474330 LUZP6Q538Z0 58 aa6.58□□□□□ -1.36
CDHR3-210ENST00000474330 LOC100996750A0A140TA64 210 aa6.57□□□□□ -1.36
CDHR3-210ENST00000474330 LCE1DQ5T752 114 aa6.48□□□□□ -1.37
CDHR3-210ENST00000474330 LCE4AQ5TA78 99 aa6.47□□□□□ -1.37
CDHR3-210ENST00000474330 KRTAP5-4Q6L8H1 288 aa6.43□□□□□ -1.38
CDHR3-210ENST00000474330 HMCN1Q96RW7 5635 aa6.42□□□□□ -1.38
CDHR3-210ENST00000474330 MT4P47944 62 aa6.4□□□□□ -1.38
CDHR3-210ENST00000474330 KRTAP5-5Q701N2 237 aaPredicted RBP6.35□□□□□ -1.39
CDHR3-210ENST00000474330 GPR98Q8WXG9 6306 aa6.34□□□□□ -1.39
CDHR3-210ENST00000474330 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.39
CDHR3-210ENST00000474330 NDUFAF8A1L188 74 aa6.28□□□□□ -1.4
CDHR3-210ENST00000474330 MT1AP04731 61 aa6.18□□□□□ -1.42
CDHR3-210ENST00000474330 AHNAK2Q8IVF2 5795 aa6.13□□□□□ -1.43
CDHR3-210ENST00000474330 KRTAP6-1Q3LI64 71 aa6.1□□□□□ -1.43
CDHR3-210ENST00000474330 SYNE1Q8NF91 8797 aaKnown RBP6.04□□□□□ -1.44
CDHR3-210ENST00000474330 KRTAP20-2Q3LI61 65 aa6.03□□□□□ -1.44
CDHR3-210ENST00000474330 KRTAP12-4P60329 112 aa5.98□□□□□ -1.45
CDHR3-210ENST00000474330 KRTAP5-10Q6L8G5 202 aa5.98□□□□□ -1.45
CDHR3-210ENST00000474330 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
CDHR3-210ENST00000474330 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
CDHR3-210ENST00000474330 KRTAP5-7Q6L8G8 165 aa5.72□□□□□ -1.49
CDHR3-210ENST00000474330 KRTAP6-2Q3LI66 62 aa5.65□□□□□ -1.51
CDHR3-210ENST00000474330 KRTAP5-2Q701N4 177 aa5.65□□□□□ -1.51
CDHR3-210ENST00000474330 MT3P25713 68 aa5.61□□□□□ -1.51
CDHR3-210ENST00000474330 A0A0A0MQY5 61 aa5.58□□□□□ -1.52
CDHR3-210ENST00000474330 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
CDHR3-210ENST00000474330 OBSCNQ5VST9 7968 aa5.35□□□□□ -1.55
CDHR3-210ENST00000474330 KRTAP5-8O75690 187 aa5.32□□□□□ -1.56
CDHR3-210ENST00000474330 LCE3DQ9BYE3 92 aa5.29□□□□□ -1.56
CDHR3-210ENST00000474330 KRTAP9-9Q9BYP9 154 aa5.24□□□□□ -1.57
CDHR3-210ENST00000474330 INE1O15225 51 aa5.21□□□□□ -1.58
CDHR3-210ENST00000474330 KRTAP4-12Q9BQ66 201 aa5.19□□□□□ -1.58
CDHR3-210ENST00000474330 LCE3EQ5T5B0 92 aa5.12□□□□□ -1.59
CDHR3-210ENST00000474330 KRTAP5-1Q6L8H4 278 aa5.06□□□□□ -1.6
CDHR3-210ENST00000474330 MUC5BQ9HC84 5762 aaPredicted RBP5.04□□□□□ -1.6
CDHR3-210ENST00000474330 MUC5ACP98088 5654 aa4.99□□□□□ -1.61
CDHR3-210ENST00000474330 AHNAKQ09666 5890 aaKnown RBP4.97□□□□□ -1.61
CDHR3-210ENST00000474330 LCE1EQ5T753 118 aa4.93□□□□□ -1.62
CDHR3-210ENST00000474330 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.63
CDHR3-210ENST00000474330 LCE1BQ5T7P3 118 aa4.59□□□□□ -1.67
CDHR3-210ENST00000474330 LCE1CQ5T751 118 aa4.58□□□□□ -1.68
CDHR3-210ENST00000474330 PRM1P04553 51 aa4.38□□□□□ -1.71
CDHR3-210ENST00000474330 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
CDHR3-210ENST00000474330 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
CDHR3-210ENST00000474330 KRTAP21-2Q3LI59 83 aa4.02□□□□□ -1.77
CDHR3-210ENST00000474330 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
CDHR3-210ENST00000474330 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
CDHR3-210ENST00000474330 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
CDHR3-210ENST00000474330 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
CDHR3-210ENST00000474330 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
CDHR3-210ENST00000474330 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 82.7 ms