RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 CRCT1Q9UGL9 99 aa3.82□□□□□ -1.8
LSS-208ENST00000474319 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
LSS-208ENST00000474319 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
LSS-208ENST00000474319 KRTAP19-6Q3LI70 58 aa3.73□□□□□ -1.81
LSS-208ENST00000474319 SPRR2FQ96RM1 72 aa3.72□□□□□ -1.81
LSS-208ENST00000474319 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.81
LSS-208ENST00000474319 LOC100996750A0A140TA64 210 aa3.71□□□□□ -1.82
LSS-208ENST00000474319 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
LSS-208ENST00000474319 LCE2DQ5TA82 110 aaPredicted RBP3.68□□□□□ -1.82
LSS-208ENST00000474319 MT1LQ93083 61 aa3.64□□□□□ -1.83
LSS-208ENST00000474319 MT1GP13640 62 aa3.62□□□□□ -1.83
LSS-208ENST00000474319 MT1EP04732 61 aa3.61□□□□□ -1.83
LSS-208ENST00000474319 KRTAP2-3P0C7H8 128 aa3.54□□□□□ -1.84
LSS-208ENST00000474319 KRTAP2-4Q9BYR9 128 aa3.54□□□□□ -1.84
LSS-208ENST00000474319 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
LSS-208ENST00000474319 KRTAP9-6A0A140TA67 174 aa3.45□□□□□ -1.86
LSS-208ENST00000474319 SPRR2EP22531 72 aa3.44□□□□□ -1.86
LSS-208ENST00000474319 SPRR2BP35325 72 aa3.44□□□□□ -1.86
LSS-208ENST00000474319 SPRR2AP35326 72 aa3.44□□□□□ -1.86
LSS-208ENST00000474319 KRTAP4-9Q9BYQ8 210 aa3.44□□□□□ -1.86
LSS-208ENST00000474319 LCE3BQ5TA77 95 aa3.43□□□□□ -1.86
LSS-208ENST00000474319 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
LSS-208ENST00000474319 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
LSS-208ENST00000474319 MT1MQ8N339 61 aa3.39□□□□□ -1.87
LSS-208ENST00000474319 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.37□□□□□ -1.87
LSS-208ENST00000474319 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
LSS-208ENST00000474319 SPRR2DP22532 72 aa3.28□□□□□ -1.88
LSS-208ENST00000474319 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
LSS-208ENST00000474319 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
LSS-208ENST00000474319 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
LSS-208ENST00000474319 KRTAP9-7A8MTY7 169 aa3.23□□□□□ -1.89
LSS-208ENST00000474319 KRTAP6-1Q3LI64 71 aa3.18□□□□□ -1.9
LSS-208ENST00000474319 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
LSS-208ENST00000474319 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.9
LSS-208ENST00000474319 KRTAP2-2Q9BYT5 123 aa3.14□□□□□ -1.91
LSS-208ENST00000474319 NEBP20929 6669 aa3.1□□□□□ -1.91
LSS-208ENST00000474319 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.92
LSS-208ENST00000474319 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
LSS-208ENST00000474319 PRM1P04553 51 aa3.06□□□□□ -1.92
LSS-208ENST00000474319 MT4P47944 62 aa3.05□□□□□ -1.92
LSS-208ENST00000474319 LCE1DQ5T752 114 aa3.03□□□□□ -1.92
LSS-208ENST00000474319 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
LSS-208ENST00000474319 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
LSS-208ENST00000474319 MT1AP04731 61 aa2.97□□□□□ -1.93
LSS-208ENST00000474319 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
LSS-208ENST00000474319 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
LSS-208ENST00000474319 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
LSS-208ENST00000474319 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
LSS-208ENST00000474319 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
LSS-208ENST00000474319 KRTAP9-4Q9BYQ2 154 aa2.8□□□□□ -1.96
LSS-208ENST00000474319 MT3P25713 68 aa2.73□□□□□ -1.97
LSS-208ENST00000474319 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
LSS-208ENST00000474319 LCE4AQ5TA78 99 aa2.62□□□□□ -1.99
LSS-208ENST00000474319 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
LSS-208ENST00000474319 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
LSS-208ENST00000474319 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
LSS-208ENST00000474319 KRTAP9-9Q9BYP9 154 aa2.47□□□□□ -2.01
LSS-208ENST00000474319 GPR98Q8WXG9 6306 aa2.44□□□□□ -2.02
LSS-208ENST00000474319 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
LSS-208ENST00000474319 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
LSS-208ENST00000474319 KRTAP4-11Q9BYQ6 195 aa2.38□□□□□ -2.03
LSS-208ENST00000474319 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
LSS-208ENST00000474319 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
LSS-208ENST00000474319 KRTAP5-8O75690 187 aa2.15□□□□□ -2.06
LSS-208ENST00000474319 KRTAP5-10Q6L8G5 202 aa2.15□□□□□ -2.06
LSS-208ENST00000474319 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
LSS-208ENST00000474319 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
LSS-208ENST00000474319 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
LSS-208ENST00000474319 KRTAP4-2Q9BYR5 136 aa2.13□□□□□ -2.07
LSS-208ENST00000474319 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
LSS-208ENST00000474319 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
LSS-208ENST00000474319 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.12
LSS-208ENST00000474319 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
LSS-208ENST00000474319 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
LSS-208ENST00000474319 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
LSS-208ENST00000474319 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
LSS-208ENST00000474319 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
LSS-208ENST00000474319 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 14.1 ms