RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
CPA4-205ENST00000474254 TNP1P09430 55 aa5.83□□□□□ -1.48
CPA4-205ENST00000474254 LCE4AQ5TA78 99 aa5.83□□□□□ -1.48
CPA4-205ENST00000474254 KRTAP4-6Q9BYQ5 205 aa5.83□□□□□ -1.48
CPA4-205ENST00000474254 MT4P47944 62 aa5.81□□□□□ -1.48
CPA4-205ENST00000474254 TMEM258P61165 79 aa5.81□□□□□ -1.48
CPA4-205ENST00000474254 LCE3AQ5TA76 89 aa5.81□□□□□ -1.48
CPA4-205ENST00000474254 MT1LQ93083 61 aa5.8□□□□□ -1.48
CPA4-205ENST00000474254 AHNAK2Q8IVF2 5795 aa5.79□□□□□ -1.48
CPA4-205ENST00000474254 MT1MQ8N339 61 aa5.78□□□□□ -1.48
CPA4-205ENST00000474254 UQCR11O14957 56 aa5.71□□□□□ -1.5
CPA4-205ENST00000474254 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
CPA4-205ENST00000474254 KRTAP5-4Q6L8H1 288 aa5.61□□□□□ -1.51
CPA4-205ENST00000474254 KRTAP5-10Q6L8G5 202 aa5.6□□□□□ -1.51
CPA4-205ENST00000474254 KRTAP12-3P60328 96 aa5.59□□□□□ -1.51
CPA4-205ENST00000474254 MIR22HGQ0VDD5 57 aa5.57□□□□□ -1.52
CPA4-205ENST00000474254 H3BS24 57 aa5.53□□□□□ -1.52
CPA4-205ENST00000474254 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
CPA4-205ENST00000474254 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
CPA4-205ENST00000474254 V9GYY9 64 aa5.48□□□□□ -1.53
CPA4-205ENST00000474254 K7ERS5 55 aa5.47□□□□□ -1.53
CPA4-205ENST00000474254 PSPHP1O15172 72 aa5.46□□□□□ -1.54
CPA4-205ENST00000474254 Q1T7F1 81 aa5.45□□□□□ -1.54
CPA4-205ENST00000474254 KRTAP5-7Q6L8G8 165 aa5.43□□□□□ -1.54
CPA4-205ENST00000474254 KRTAP5-3Q6L8H2 238 aa5.42□□□□□ -1.54
CPA4-205ENST00000474254 PRO0628Q9UI54 55 aa5.4□□□□□ -1.54
CPA4-205ENST00000474254 KRTAP20-2Q3LI61 65 aa5.35□□□□□ -1.55
CPA4-205ENST00000474254 KRTAP5-5Q701N2 237 aaPredicted RBP5.32□□□□□ -1.56
CPA4-205ENST00000474254 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
CPA4-205ENST00000474254 SPRR5A0A1B0GTR4 108 aa5.29□□□□□ -1.56
CPA4-205ENST00000474254 KRTAP4-12Q9BQ66 201 aa5.29□□□□□ -1.56
CPA4-205ENST00000474254 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
CPA4-205ENST00000474254 A6NED7 52 aa5.27□□□□□ -1.57
CPA4-205ENST00000474254 KRTAP12-4P60329 112 aa5.26□□□□□ -1.57
CPA4-205ENST00000474254 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
CPA4-205ENST00000474254 SYNE1Q8NF91 8797 aaKnown RBP5.2□□□□□ -1.58
CPA4-205ENST00000474254 CDC42SE1Q9NRR8 79 aa5.19□□□□□ -1.58
CPA4-205ENST00000474254 BRK1Q8WUW1 75 aa5.16□□□□□ -1.58
CPA4-205ENST00000474254 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
CPA4-205ENST00000474254 ROMO1P60602 79 aa5.1□□□□□ -1.59
CPA4-205ENST00000474254 KRTAP9-9Q9BYP9 154 aa5.03□□□□□ -1.6
CPA4-205ENST00000474254 KRTAP9-4Q9BYQ2 154 aa5.03□□□□□ -1.6
CPA4-205ENST00000474254 PMAIP1Q13794 54 aa5.02□□□□□ -1.61
CPA4-205ENST00000474254 KRTAP4-11Q9BYQ6 195 aa4.95□□□□□ -1.62
CPA4-205ENST00000474254 MT1AP04731 61 aa4.94□□□□□ -1.62
CPA4-205ENST00000474254 KTN1-AS1Q86SY8 53 aa4.93□□□□□ -1.62
CPA4-205ENST00000474254 KRTAP6-1Q3LI64 71 aa4.9□□□□□ -1.63
CPA4-205ENST00000474254 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
CPA4-205ENST00000474254 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
CPA4-205ENST00000474254 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
CPA4-205ENST00000474254 MUC5BQ9HC84 5762 aaPredicted RBP4.79□□□□□ -1.64
CPA4-205ENST00000474254 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
CPA4-205ENST00000474254 KRTAP5-8O75690 187 aa4.78□□□□□ -1.64
CPA4-205ENST00000474254 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
CPA4-205ENST00000474254 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
CPA4-205ENST00000474254 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
CPA4-205ENST00000474254 MT3P25713 68 aa4.5□□□□□ -1.69
CPA4-205ENST00000474254 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
CPA4-205ENST00000474254 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
CPA4-205ENST00000474254 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
CPA4-205ENST00000474254 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
CPA4-205ENST00000474254 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
CPA4-205ENST00000474254 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
CPA4-205ENST00000474254 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
CPA4-205ENST00000474254 LUZP6Q538Z0 58 aa3.65□□□□□ -1.83
CPA4-205ENST00000474254 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
CPA4-205ENST00000474254 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
CPA4-205ENST00000474254 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
CPA4-205ENST00000474254 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
CPA4-205ENST00000474254 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
CPA4-205ENST00000474254 PHGR1C9JFL3 82 aa3.32□□□□□ -1.88
CPA4-205ENST00000474254 INE1O15225 51 aa3.32□□□□□ -1.88
CPA4-205ENST00000474254 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
CPA4-205ENST00000474254 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
CPA4-205ENST00000474254 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
CPA4-205ENST00000474254 PRM1P04553 51 aa2.61□□□□□ -1.99
CPA4-205ENST00000474254 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
CPA4-205ENST00000474254 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 59.7 ms