RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
CASC3-204ENST00000474190 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
CASC3-204ENST00000474190 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
CASC3-204ENST00000474190 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
CASC3-204ENST00000474190 KRTAP9-9Q9BYP9 154 aa3.93□□□□□ -1.78
CASC3-204ENST00000474190 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
CASC3-204ENST00000474190 SPRR2DP22532 72 aa3.91□□□□□ -1.78
CASC3-204ENST00000474190 A0A0A0MQY5 61 aa3.9□□□□□ -1.79
CASC3-204ENST00000474190 LCE3AQ5TA76 89 aa3.89□□□□□ -1.79
CASC3-204ENST00000474190 TNP1P09430 55 aa3.88□□□□□ -1.79
CASC3-204ENST00000474190 K7ERS5 55 aa3.86□□□□□ -1.79
CASC3-204ENST00000474190 MT1EP04732 61 aa3.86□□□□□ -1.79
CASC3-204ENST00000474190 KRTAP19-5Q3LI72 72 aa3.85□□□□□ -1.79
CASC3-204ENST00000474190 KRTAP15-1Q3LI76 137 aa3.85□□□□□ -1.79
CASC3-204ENST00000474190 KRTAP25-1Q3LHN0 102 aa3.82□□□□□ -1.8
CASC3-204ENST00000474190 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
CASC3-204ENST00000474190 ROMO1P60602 79 aa3.78□□□□□ -1.8
CASC3-204ENST00000474190 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
CASC3-204ENST00000474190 LCE5AQ5TCM9 118 aa3.76□□□□□ -1.81
CASC3-204ENST00000474190 BRK1Q8WUW1 75 aa3.76□□□□□ -1.81
CASC3-204ENST00000474190 KRTAP19-3Q7Z4W3 81 aa3.73□□□□□ -1.81
CASC3-204ENST00000474190 MT1LQ93083 61 aa3.73□□□□□ -1.81
CASC3-204ENST00000474190 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
CASC3-204ENST00000474190 KRTAP12-3P60328 96 aa3.71□□□□□ -1.82
CASC3-204ENST00000474190 HMCN1Q96RW7 5635 aa3.7□□□□□ -1.82
CASC3-204ENST00000474190 AHNAK2Q8IVF2 5795 aa3.7□□□□□ -1.82
CASC3-204ENST00000474190 MT1GP13640 62 aa3.65□□□□□ -1.83
CASC3-204ENST00000474190 MT1MQ8N339 61 aa3.64□□□□□ -1.83
CASC3-204ENST00000474190 KRTAP4-7Q9BYR0 210 aa3.64□□□□□ -1.83
CASC3-204ENST00000474190 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
CASC3-204ENST00000474190 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
CASC3-204ENST00000474190 KRTAP5-10Q6L8G5 202 aa3.56□□□□□ -1.84
CASC3-204ENST00000474190 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
CASC3-204ENST00000474190 PMAIP1Q13794 54 aa3.54□□□□□ -1.84
CASC3-204ENST00000474190 PRO0628Q9UI54 55 aa3.54□□□□□ -1.84
CASC3-204ENST00000474190 KRTAP4-2Q9BYR5 136 aa3.48□□□□□ -1.85
CASC3-204ENST00000474190 MT4P47944 62 aa3.47□□□□□ -1.85
CASC3-204ENST00000474190 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
CASC3-204ENST00000474190 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
CASC3-204ENST00000474190 PRAC1Q96KF2 57 aa3.44□□□□□ -1.86
CASC3-204ENST00000474190 SPRR5A0A1B0GTR4 108 aa3.38□□□□□ -1.87
CASC3-204ENST00000474190 KRTAP9-6A8MVA2 160 aa3.37□□□□□ -1.87
CASC3-204ENST00000474190 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
CASC3-204ENST00000474190 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
CASC3-204ENST00000474190 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
CASC3-204ENST00000474190 KTN1-AS1Q86SY8 53 aa3.31□□□□□ -1.88
CASC3-204ENST00000474190 SYNE1Q8NF91 8797 aaKnown RBP3.31□□□□□ -1.88
CASC3-204ENST00000474190 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
CASC3-204ENST00000474190 MT1AP04731 61 aa3.15□□□□□ -1.91
CASC3-204ENST00000474190 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
CASC3-204ENST00000474190 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
CASC3-204ENST00000474190 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
CASC3-204ENST00000474190 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
CASC3-204ENST00000474190 MT3P25713 68 aa3.08□□□□□ -1.92
CASC3-204ENST00000474190 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
CASC3-204ENST00000474190 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
CASC3-204ENST00000474190 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
CASC3-204ENST00000474190 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
CASC3-204ENST00000474190 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
CASC3-204ENST00000474190 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
CASC3-204ENST00000474190 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
CASC3-204ENST00000474190 LUZP6Q538Z0 58 aa2.67□□□□□ -1.98
CASC3-204ENST00000474190 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
CASC3-204ENST00000474190 LCE1EQ5T753 118 aa2.57□□□□□ -2
CASC3-204ENST00000474190 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
CASC3-204ENST00000474190 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
CASC3-204ENST00000474190 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
CASC3-204ENST00000474190 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
CASC3-204ENST00000474190 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
CASC3-204ENST00000474190 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
CASC3-204ENST00000474190 INE1O15225 51 aa2.2□□□□□ -2.06
CASC3-204ENST00000474190 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
CASC3-204ENST00000474190 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
CASC3-204ENST00000474190 PRM1P04553 51 aa1.97□□□□□ -2.09
CASC3-204ENST00000474190 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
CASC3-204ENST00000474190 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
CASC3-204ENST00000474190 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
CASC3-204ENST00000474190 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 13.2 ms