RNA–Protein interactions for RNA: ENST00000474153.1

UBE3C-206, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-206ENST00000474153 KRTAP19-5Q3LI72 72 aa2.17□□□□□ -2.06
UBE3C-206ENST00000474153 PRO0628Q9UI54 55 aa2.17□□□□□ -2.06
UBE3C-206ENST00000474153 V9GYY9 64 aa2.17□□□□□ -2.06
UBE3C-206ENST00000474153 MT4P47944 62 aa2.16□□□□□ -2.06
UBE3C-206ENST00000474153 TNP1P09430 55 aa2.15□□□□□ -2.07
UBE3C-206ENST00000474153 MT1GP13640 62 aa2.15□□□□□ -2.07
UBE3C-206ENST00000474153 Q1T7F1 81 aa2.15□□□□□ -2.07
UBE3C-206ENST00000474153 LCE3AQ5TA76 89 aa2.14□□□□□ -2.07
UBE3C-206ENST00000474153 MT1LQ93083 61 aa2.14□□□□□ -2.07
UBE3C-206ENST00000474153 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
UBE3C-206ENST00000474153 PP632Q6XCG6 107 aa2.12□□□□□ -2.07
UBE3C-206ENST00000474153 MT1MQ8N339 61 aa2.12□□□□□ -2.07
UBE3C-206ENST00000474153 MIR22HGQ0VDD5 57 aa2.11□□□□□ -2.07
UBE3C-206ENST00000474153 KRTAP5-4Q6L8H1 288 aa2.09□□□□□ -2.07
UBE3C-206ENST00000474153 PSPHP1O15172 72 aa2.08□□□□□ -2.08
UBE3C-206ENST00000474153 KRTAP5-3Q6L8H2 238 aa2.08□□□□□ -2.08
UBE3C-206ENST00000474153 KRTAP4-6Q9BYQ5 205 aa2.08□□□□□ -2.08
UBE3C-206ENST00000474153 KRTAP25-1Q3LHN0 102 aa2.07□□□□□ -2.08
UBE3C-206ENST00000474153 BRK1Q8WUW1 75 aa2.07□□□□□ -2.08
UBE3C-206ENST00000474153 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
UBE3C-206ENST00000474153 KRTAP23-1A1A580 65 aa2.06□□□□□ -2.08
UBE3C-206ENST00000474153 KRTAP12-3P60328 96 aa2.06□□□□□ -2.08
UBE3C-206ENST00000474153 SPRR5A0A1B0GTR4 108 aa2.04□□□□□ -2.08
UBE3C-206ENST00000474153 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
UBE3C-206ENST00000474153 KRTAP19-4Q3LI73 84 aa2.03□□□□□ -2.08
UBE3C-206ENST00000474153 K7ERS5 55 aa2.02□□□□□ -2.09
UBE3C-206ENST00000474153 PMAIP1Q13794 54 aa2.02□□□□□ -2.09
UBE3C-206ENST00000474153 KRTAP4-3Q9BYR4 195 aa2.02□□□□□ -2.09
UBE3C-206ENST00000474153 KRTAP5-5Q701N2 237 aaPredicted RBP2□□□□□ -2.09
UBE3C-206ENST00000474153 KRTAP4-7Q9BYR0 210 aa2□□□□□ -2.09
UBE3C-206ENST00000474153 CDC42SE1Q9NRR8 79 aa2□□□□□ -2.09
UBE3C-206ENST00000474153 A6NED7 52 aa1.99□□□□□ -2.09
UBE3C-206ENST00000474153 KTN1-AS1Q86SY8 53 aa1.99□□□□□ -2.09
UBE3C-206ENST00000474153 KRTAP20-2Q3LI61 65 aa1.98□□□□□ -2.09
UBE3C-206ENST00000474153 KRTAP12-4P60329 112 aa1.94□□□□□ -2.1
UBE3C-206ENST00000474153 KRTAP15-1Q3LI76 137 aa1.94□□□□□ -2.1
UBE3C-206ENST00000474153 ROMO1P60602 79 aa1.93□□□□□ -2.1
UBE3C-206ENST00000474153 H3BS24 57 aa1.91□□□□□ -2.1
UBE3C-206ENST00000474153 LCE3CQ5T5A8 94 aa1.91□□□□□ -2.1
UBE3C-206ENST00000474153 LOC100996750A0A140TA64 210 aa1.89□□□□□ -2.11
UBE3C-206ENST00000474153 KRTAP4-11Q9BYQ6 195 aa1.87□□□□□ -2.11
UBE3C-206ENST00000474153 KRTAP9-6A8MVA2 160 aa1.84□□□□□ -2.11
UBE3C-206ENST00000474153 SYNE1Q8NF91 8797 aaKnown RBP1.82□□□□□ -2.12
UBE3C-206ENST00000474153 MT1AP04731 61 aa1.82□□□□□ -2.12
UBE3C-206ENST00000474153 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
UBE3C-206ENST00000474153 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
UBE3C-206ENST00000474153 KRTAP6-1Q3LI64 71 aa1.8□□□□□ -2.12
UBE3C-206ENST00000474153 PRAC1Q96KF2 57 aa1.78□□□□□ -2.12
UBE3C-206ENST00000474153 KRTAP9-9Q9BYP9 154 aa1.77□□□□□ -2.13
UBE3C-206ENST00000474153 MUC5ACP98088 5654 aa1.77□□□□□ -2.13
UBE3C-206ENST00000474153 KRTAP9-4Q9BYQ2 154 aa1.75□□□□□ -2.13
UBE3C-206ENST00000474153 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
UBE3C-206ENST00000474153 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
UBE3C-206ENST00000474153 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
UBE3C-206ENST00000474153 OBSCNQ5VST9 7968 aa1.69□□□□□ -2.14
UBE3C-206ENST00000474153 MT3P25713 68 aa1.64□□□□□ -2.15
UBE3C-206ENST00000474153 KRTAP5-1Q6L8H4 278 aa1.64□□□□□ -2.15
UBE3C-206ENST00000474153 A0A0A0MQY5 61 aa1.56□□□□□ -2.16
UBE3C-206ENST00000474153 KRTAP4-12Q9BQ66 201 aa1.56□□□□□ -2.16
UBE3C-206ENST00000474153 LUZP6Q538Z0 58 aa1.54□□□□□ -2.16
UBE3C-206ENST00000474153 LCE1EQ5T753 118 aa1.54□□□□□ -2.16
UBE3C-206ENST00000474153 NDUFAF8A1L188 74 aa1.52□□□□□ -2.17
UBE3C-206ENST00000474153 KRTAP4-2Q9BYR5 136 aa1.46□□□□□ -2.18
UBE3C-206ENST00000474153 LCE1CQ5T751 118 aa1.44□□□□□ -2.18
UBE3C-206ENST00000474153 LCE1BQ5T7P3 118 aa1.44□□□□□ -2.18
UBE3C-206ENST00000474153 INE1O15225 51 aa1.38□□□□□ -2.19
UBE3C-206ENST00000474153 LCE3DQ9BYE3 92 aa1.37□□□□□ -2.19
UBE3C-206ENST00000474153 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
UBE3C-206ENST00000474153 LCE1FQ5T754 118 aa1.33□□□□□ -2.2
UBE3C-206ENST00000474153 KRTAP5-11Q6L8G4 156 aa1.32□□□□□ -2.2
UBE3C-206ENST00000474153 LCE3EQ5T5B0 92 aa1.3□□□□□ -2.2
UBE3C-206ENST00000474153 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
UBE3C-206ENST00000474153 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
UBE3C-206ENST00000474153 MUC19Q7Z5P9 8384 aa1.06□□□□□ -2.24
UBE3C-206ENST00000474153 KRTAP4-4Q9BYR3 166 aa1.03□□□□□ -2.24
UBE3C-206ENST00000474153 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
UBE3C-206ENST00000474153 PRM1P04553 51 aa0.98□□□□□ -2.25
UBE3C-206ENST00000474153 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 170.6 ms