RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 H7BZZ5 65 aa4.26□□□□□ -1.73
SMPD4-217ENST00000473720 SMIM26A0A096LP01 95 aa4.25□□□□□ -1.73
SMPD4-217ENST00000473720 MT4P47944 62 aa4.25□□□□□ -1.73
SMPD4-217ENST00000473720 MT1MQ8N339 61 aa4.25□□□□□ -1.73
SMPD4-217ENST00000473720 MT1LQ93083 61 aa4.24□□□□□ -1.73
SMPD4-217ENST00000473720 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
SMPD4-217ENST00000473720 C10orf95Q9H7T3 257 aa4.22□□□□□ -1.73
SMPD4-217ENST00000473720 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
SMPD4-217ENST00000473720 TNP1P09430 55 aa4.19□□□□□ -1.74
SMPD4-217ENST00000473720 GPR98Q8WXG9 6306 aa4.15□□□□□ -1.74
SMPD4-217ENST00000473720 ANAPC13Q9BS18 74 aa4.1□□□□□ -1.75
SMPD4-217ENST00000473720 PRR15LQ9BU68 103 aa4.08□□□□□ -1.76
SMPD4-217ENST00000473720 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
SMPD4-217ENST00000473720 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
SMPD4-217ENST00000473720 CCDC179H3BU77 68 aa4.03□□□□□ -1.76
SMPD4-217ENST00000473720 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
SMPD4-217ENST00000473720 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
SMPD4-217ENST00000473720 LINC01558Q9Y6Z2 57 aa3.99□□□□□ -1.77
SMPD4-217ENST00000473720 ATP5EP56381 51 aaPredicted RBP3.98□□□□□ -1.77
SMPD4-217ENST00000473720 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
SMPD4-217ENST00000473720 AHNAK2Q8IVF2 5795 aa3.96□□□□□ -1.78
SMPD4-217ENST00000473720 UQCR11O14957 56 aa3.94□□□□□ -1.78
SMPD4-217ENST00000473720 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
SMPD4-217ENST00000473720 KRTAP5-3Q6L8H2 238 aa3.89□□□□□ -1.79
SMPD4-217ENST00000473720 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
SMPD4-217ENST00000473720 KRTAP25-1Q3LHN0 102 aa3.86□□□□□ -1.79
SMPD4-217ENST00000473720 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
SMPD4-217ENST00000473720 KRTAP12-4P60329 112 aa3.84□□□□□ -1.79
SMPD4-217ENST00000473720 KRTAP5-7Q6L8G8 165 aa3.84□□□□□ -1.79
SMPD4-217ENST00000473720 TMEM258P61165 79 aa3.83□□□□□ -1.8
SMPD4-217ENST00000473720 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
SMPD4-217ENST00000473720 K7ERS5 55 aa3.81□□□□□ -1.8
SMPD4-217ENST00000473720 PSPHP1O15172 72 aa3.74□□□□□ -1.81
SMPD4-217ENST00000473720 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
SMPD4-217ENST00000473720 PCP4P48539 62 aa3.69□□□□□ -1.82
SMPD4-217ENST00000473720 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
SMPD4-217ENST00000473720 V9GYY9 64 aa3.65□□□□□ -1.83
SMPD4-217ENST00000473720 Q1T7F1 81 aa3.61□□□□□ -1.83
SMPD4-217ENST00000473720 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
SMPD4-217ENST00000473720 A6NED7 52 aa3.6□□□□□ -1.83
SMPD4-217ENST00000473720 MT1AP04731 61 aa3.59□□□□□ -1.83
SMPD4-217ENST00000473720 CDC42SE1Q9NRR8 79 aa3.58□□□□□ -1.84
SMPD4-217ENST00000473720 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
SMPD4-217ENST00000473720 RPS28P62857 69 aaKnown RBP3.53□□□□□ -1.84
SMPD4-217ENST00000473720 ROMO1P60602 79 aa3.5□□□□□ -1.85
SMPD4-217ENST00000473720 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
SMPD4-217ENST00000473720 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
SMPD4-217ENST00000473720 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
SMPD4-217ENST00000473720 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
SMPD4-217ENST00000473720 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
SMPD4-217ENST00000473720 MT3P25713 68 aa3.3□□□□□ -1.88
SMPD4-217ENST00000473720 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
SMPD4-217ENST00000473720 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
SMPD4-217ENST00000473720 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
SMPD4-217ENST00000473720 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
SMPD4-217ENST00000473720 LCE1EQ5T753 118 aa3□□□□□ -1.93
SMPD4-217ENST00000473720 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
SMPD4-217ENST00000473720 BRK1Q8WUW1 75 aa2.93□□□□□ -1.94
SMPD4-217ENST00000473720 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
SMPD4-217ENST00000473720 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
SMPD4-217ENST00000473720 PRAC1Q96KF2 57 aa2.88□□□□□ -1.95
SMPD4-217ENST00000473720 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
SMPD4-217ENST00000473720 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
SMPD4-217ENST00000473720 PRO0628Q9UI54 55 aa2.8□□□□□ -1.96
SMPD4-217ENST00000473720 PMAIP1Q13794 54 aa2.72□□□□□ -1.97
SMPD4-217ENST00000473720 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
SMPD4-217ENST00000473720 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
SMPD4-217ENST00000473720 KTN1-AS1Q86SY8 53 aa2.48□□□□□ -2.01
SMPD4-217ENST00000473720 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
SMPD4-217ENST00000473720 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
SMPD4-217ENST00000473720 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
SMPD4-217ENST00000473720 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
SMPD4-217ENST00000473720 LUZP6Q538Z0 58 aa2.34□□□□□ -2.03
SMPD4-217ENST00000473720 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
SMPD4-217ENST00000473720 PRM1P04553 51 aa1.81□□□□□ -2.12
SMPD4-217ENST00000473720 INE1O15225 51 aa1.77□□□□□ -2.13
SMPD4-217ENST00000473720 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
SMPD4-217ENST00000473720 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms