RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 K7ERS5 55 aa6.41□□□□□ -1.38
RPUSD3-214ENST00000473522 MT1GP13640 62 aa6.38□□□□□ -1.39
RPUSD3-214ENST00000473522 A6NED7 52 aa6.33□□□□□ -1.4
RPUSD3-214ENST00000473522 KRTAP25-1Q3LHN0 102 aa6.32□□□□□ -1.4
RPUSD3-214ENST00000473522 MT1LQ93083 61 aa6.31□□□□□ -1.4
RPUSD3-214ENST00000473522 DSTQ03001 7570 aaKnown RBP6.31□□□□□ -1.4
RPUSD3-214ENST00000473522 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
RPUSD3-214ENST00000473522 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
RPUSD3-214ENST00000473522 MT1MQ8N339 61 aa6.23□□□□□ -1.41
RPUSD3-214ENST00000473522 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
RPUSD3-214ENST00000473522 CDC42SE1Q9NRR8 79 aa6.12□□□□□ -1.43
RPUSD3-214ENST00000473522 KRTAP4-3Q9BYR4 195 aa6.05□□□□□ -1.44
RPUSD3-214ENST00000473522 ROMO1P60602 79 aa6.04□□□□□ -1.44
RPUSD3-214ENST00000473522 KRTAP19-4Q3LI73 84 aa6□□□□□ -1.45
RPUSD3-214ENST00000473522 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
RPUSD3-214ENST00000473522 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
RPUSD3-214ENST00000473522 LCE4AQ5TA78 99 aa5.91□□□□□ -1.46
RPUSD3-214ENST00000473522 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
RPUSD3-214ENST00000473522 KRTAP5-4Q6L8H1 288 aa5.87□□□□□ -1.47
RPUSD3-214ENST00000473522 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
RPUSD3-214ENST00000473522 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
RPUSD3-214ENST00000473522 HMCN1Q96RW7 5635 aa5.76□□□□□ -1.49
RPUSD3-214ENST00000473522 MT4P47944 62 aa5.74□□□□□ -1.49
RPUSD3-214ENST00000473522 KRTAP5-5Q701N2 237 aaPredicted RBP5.74□□□□□ -1.49
RPUSD3-214ENST00000473522 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
RPUSD3-214ENST00000473522 KRTAP4-6Q9BYQ5 205 aa5.66□□□□□ -1.5
RPUSD3-214ENST00000473522 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
RPUSD3-214ENST00000473522 GPR98Q8WXG9 6306 aa5.59□□□□□ -1.51
RPUSD3-214ENST00000473522 SYNE1Q8NF91 8797 aaKnown RBP5.55□□□□□ -1.52
RPUSD3-214ENST00000473522 SPRR5A0A1B0GTR4 108 aa5.52□□□□□ -1.53
RPUSD3-214ENST00000473522 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
RPUSD3-214ENST00000473522 KRTAP20-2Q3LI61 65 aa5.48□□□□□ -1.53
RPUSD3-214ENST00000473522 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
RPUSD3-214ENST00000473522 AHNAK2Q8IVF2 5795 aa5.4□□□□□ -1.54
RPUSD3-214ENST00000473522 MT1AP04731 61 aa5.38□□□□□ -1.55
RPUSD3-214ENST00000473522 PMAIP1Q13794 54 aa5.35□□□□□ -1.55
RPUSD3-214ENST00000473522 KRTAP5-3Q6L8H2 238 aa5.35□□□□□ -1.55
RPUSD3-214ENST00000473522 KRTAP6-1Q3LI64 71 aa5.32□□□□□ -1.56
RPUSD3-214ENST00000473522 KRTAP5-10Q6L8G5 202 aa5.32□□□□□ -1.56
RPUSD3-214ENST00000473522 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.58
RPUSD3-214ENST00000473522 KRTAP5-2Q701N4 177 aa5.17□□□□□ -1.58
RPUSD3-214ENST00000473522 PRO0628Q9UI54 55 aa5.12□□□□□ -1.59
RPUSD3-214ENST00000473522 KRTAP5-7Q6L8G8 165 aa5.09□□□□□ -1.59
RPUSD3-214ENST00000473522 PRAC1Q96KF2 57 aa5.08□□□□□ -1.6
RPUSD3-214ENST00000473522 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
RPUSD3-214ENST00000473522 KRTAP4-11Q9BYQ6 195 aa4.96□□□□□ -1.62
RPUSD3-214ENST00000473522 MT3P25713 68 aa4.93□□□□□ -1.62
RPUSD3-214ENST00000473522 OBSCNQ5VST9 7968 aa4.84□□□□□ -1.63
RPUSD3-214ENST00000473522 KTN1-AS1Q86SY8 53 aa4.83□□□□□ -1.64
RPUSD3-214ENST00000473522 KRTAP5-8O75690 187 aa4.8□□□□□ -1.64
RPUSD3-214ENST00000473522 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
RPUSD3-214ENST00000473522 SVIPQ8NHG7 77 aa4.53□□□□□ -1.68
RPUSD3-214ENST00000473522 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
RPUSD3-214ENST00000473522 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
RPUSD3-214ENST00000473522 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
RPUSD3-214ENST00000473522 MUC5BQ9HC84 5762 aaPredicted RBP4.48□□□□□ -1.69
RPUSD3-214ENST00000473522 AHNAKQ09666 5890 aaKnown RBP4.43□□□□□ -1.7
RPUSD3-214ENST00000473522 LUZP6Q538Z0 58 aa4.26□□□□□ -1.73
RPUSD3-214ENST00000473522 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
RPUSD3-214ENST00000473522 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
RPUSD3-214ENST00000473522 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
RPUSD3-214ENST00000473522 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
RPUSD3-214ENST00000473522 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
RPUSD3-214ENST00000473522 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
RPUSD3-214ENST00000473522 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
RPUSD3-214ENST00000473522 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
RPUSD3-214ENST00000473522 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
RPUSD3-214ENST00000473522 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
RPUSD3-214ENST00000473522 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
RPUSD3-214ENST00000473522 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
RPUSD3-214ENST00000473522 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
RPUSD3-214ENST00000473522 PRM1P04553 51 aa3.07□□□□□ -1.92
RPUSD3-214ENST00000473522 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
RPUSD3-214ENST00000473522 A0A0A0MQY5 61 aa2.95□□□□□ -1.94
RPUSD3-214ENST00000473522 INE1O15225 51 aa2.94□□□□□ -1.94
RPUSD3-214ENST00000473522 H3BS24 57 aa2.81□□□□□ -1.96
RPUSD3-214ENST00000473522 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
RPUSD3-214ENST00000473522 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 80.7 ms