RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 KRTAP19-2Q3LHN2 52 aa2.37□□□□□ -2.03
LRCH3-214ENST00000473177 KRTAP13-4Q3LI77 160 aa2.37□□□□□ -2.03
LRCH3-214ENST00000473177 PLAC4Q8WY50 150 aa2.37□□□□□ -2.03
LRCH3-214ENST00000473177 R4GN34 69 aa2.37□□□□□ -2.03
LRCH3-214ENST00000473177 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
LRCH3-214ENST00000473177 C10orf95Q9H7T3 257 aa2.34□□□□□ -2.03
LRCH3-214ENST00000473177 CAMK2N1Q7Z7J9 78 aa2.33□□□□□ -2.04
LRCH3-214ENST00000473177 KRTAP20-1Q3LI63 56 aa2.32□□□□□ -2.04
LRCH3-214ENST00000473177 KRTAP6-3Q3LI67 103 aa2.32□□□□□ -2.04
LRCH3-214ENST00000473177 MACF1Q9UPN3 7388 aaKnown RBP2.31□□□□□ -2.04
LRCH3-214ENST00000473177 SSPOA2VEC9 5147 aa2.31□□□□□ -2.04
LRCH3-214ENST00000473177 USH2AO75445 5202 aa2.3□□□□□ -2.04
LRCH3-214ENST00000473177 FCGBPQ9Y6R7 5405 aaPredicted RBP2.3□□□□□ -2.04
LRCH3-214ENST00000473177 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
LRCH3-214ENST00000473177 SYNE2Q8WXH0 6885 aaKnown RBP2.25□□□□□ -2.05
LRCH3-214ENST00000473177 TNP1P09430 55 aa2.25□□□□□ -2.05
LRCH3-214ENST00000473177 KRTAP10-10P60014 251 aa2.22□□□□□ -2.05
LRCH3-214ENST00000473177 KRTAP19-6Q3LI70 58 aa2.22□□□□□ -2.05
LRCH3-214ENST00000473177 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
LRCH3-214ENST00000473177 MT2AP02795 61 aa2.21□□□□□ -2.06
LRCH3-214ENST00000473177 MT1FP04733 61 aa2.19□□□□□ -2.06
LRCH3-214ENST00000473177 LCE3AQ5TA76 89 aa2.17□□□□□ -2.06
LRCH3-214ENST00000473177 INE1O15225 51 aa2.16□□□□□ -2.06
LRCH3-214ENST00000473177 KRTAP2-3P0C7H8 128 aa2.16□□□□□ -2.06
LRCH3-214ENST00000473177 KRTAP2-4Q9BYR9 128 aa2.16□□□□□ -2.06
LRCH3-214ENST00000473177 NEBP20929 6669 aa2.14□□□□□ -2.07
LRCH3-214ENST00000473177 FLGP20930 4061 aaPredicted RBP2.14□□□□□ -2.07
LRCH3-214ENST00000473177 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
LRCH3-214ENST00000473177 PRO2289Q9P1D8 64 aa2.12□□□□□ -2.07
LRCH3-214ENST00000473177 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
LRCH3-214ENST00000473177 MUC12Q9UKN1 5478 aa2.08□□□□□ -2.08
LRCH3-214ENST00000473177 SPRR2EP22531 72 aa2.05□□□□□ -2.08
LRCH3-214ENST00000473177 SPRR2BP35325 72 aa2.05□□□□□ -2.08
LRCH3-214ENST00000473177 SPRR2AP35326 72 aa2.05□□□□□ -2.08
LRCH3-214ENST00000473177 KMT2DO14686 5537 aa2.05□□□□□ -2.08
LRCH3-214ENST00000473177 SPRR2GQ9BYE4 73 aa2.02□□□□□ -2.09
LRCH3-214ENST00000473177 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
LRCH3-214ENST00000473177 SPRR2FQ96RM1 72 aa2□□□□□ -2.09
LRCH3-214ENST00000473177 MDN1Q9NU22 5596 aa1.99□□□□□ -2.09
LRCH3-214ENST00000473177 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
LRCH3-214ENST00000473177 SPRR2DP22532 72 aa1.98□□□□□ -2.09
LRCH3-214ENST00000473177 KRTAP8-1Q8IUC2 63 aa1.98□□□□□ -2.09
LRCH3-214ENST00000473177 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
LRCH3-214ENST00000473177 GPR98Q8WXG9 6306 aa1.96□□□□□ -2.1
LRCH3-214ENST00000473177 MT1BP07438 61 aa1.92□□□□□ -2.1
LRCH3-214ENST00000473177 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
LRCH3-214ENST00000473177 KRTAP19-8Q3LI54 63 aa1.9□□□□□ -2.11
LRCH3-214ENST00000473177 LCE1CQ5T751 118 aa1.9□□□□□ -2.11
LRCH3-214ENST00000473177 LCE1BQ5T7P3 118 aa1.9□□□□□ -2.11
LRCH3-214ENST00000473177 DSTQ03001 7570 aaKnown RBP1.81□□□□□ -2.12
LRCH3-214ENST00000473177 MT1XP80297 61 aa1.8□□□□□ -2.12
LRCH3-214ENST00000473177 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
LRCH3-214ENST00000473177 MT4P47944 62 aa1.76□□□□□ -2.13
LRCH3-214ENST00000473177 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
LRCH3-214ENST00000473177 KRTAP19-5Q3LI72 72 aa1.72□□□□□ -2.13
LRCH3-214ENST00000473177 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
LRCH3-214ENST00000473177 HMCN1Q96RW7 5635 aa1.69□□□□□ -2.14
LRCH3-214ENST00000473177 MT1EP04732 61 aa1.63□□□□□ -2.15
LRCH3-214ENST00000473177 KRTAP19-3Q7Z4W3 81 aa1.62□□□□□ -2.15
LRCH3-214ENST00000473177 MT1LQ93083 61 aa1.62□□□□□ -2.15
LRCH3-214ENST00000473177 KRTAP19-7Q3SYF9 63 aa1.58□□□□□ -2.16
LRCH3-214ENST00000473177 MT1GP13640 62 aa1.55□□□□□ -2.16
LRCH3-214ENST00000473177 KRTAP12-4P60329 112 aa1.55□□□□□ -2.16
LRCH3-214ENST00000473177 KRTAP20-2Q3LI61 65 aa1.54□□□□□ -2.16
LRCH3-214ENST00000473177 MT1AP04731 61 aa1.53□□□□□ -2.16
LRCH3-214ENST00000473177 MT1MQ8N339 61 aa1.51□□□□□ -2.17
LRCH3-214ENST00000473177 MUC5ACP98088 5654 aa1.5□□□□□ -2.17
LRCH3-214ENST00000473177 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
LRCH3-214ENST00000473177 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
LRCH3-214ENST00000473177 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
LRCH3-214ENST00000473177 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
LRCH3-214ENST00000473177 PRM1P04553 51 aa1.34□□□□□ -2.19
LRCH3-214ENST00000473177 SYNE1Q8NF91 8797 aaKnown RBP1.31□□□□□ -2.2
LRCH3-214ENST00000473177 KRTAP6-1Q3LI64 71 aa1.3□□□□□ -2.2
LRCH3-214ENST00000473177 KRTAP6-2Q3LI66 62 aa1.25□□□□□ -2.21
LRCH3-214ENST00000473177 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
LRCH3-214ENST00000473177 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
LRCH3-214ENST00000473177 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms