RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 V9GYY9 64 aa7.33□□□□□ -1.24
EPHB3-202ENST00000473079 LINC01558Q9Y6Z2 57 aa7.29□□□□□ -1.24
EPHB3-202ENST00000473079 Q1T7F1 81 aa7.27□□□□□ -1.25
EPHB3-202ENST00000473079 LCE4AQ5TA78 99 aa7.25□□□□□ -1.25
EPHB3-202ENST00000473079 LCE1DQ5T752 114 aa7.24□□□□□ -1.25
EPHB3-202ENST00000473079 GPR98Q8WXG9 6306 aa7.21□□□□□ -1.25
EPHB3-202ENST00000473079 KRTAP4-3Q9BYR4 195 aa7.17□□□□□ -1.26
EPHB3-202ENST00000473079 UQCR11O14957 56 aa7.14□□□□□ -1.27
EPHB3-202ENST00000473079 MT4P47944 62 aa7.11□□□□□ -1.27
EPHB3-202ENST00000473079 KRTAP5-4Q6L8H1 288 aa7.11□□□□□ -1.27
EPHB3-202ENST00000473079 HMCN1Q96RW7 5635 aa7.11□□□□□ -1.27
EPHB3-202ENST00000473079 KRTAP12-3P60328 96 aa7.09□□□□□ -1.27
EPHB3-202ENST00000473079 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
EPHB3-202ENST00000473079 PSPHP1O15172 72 aa6.97□□□□□ -1.29
EPHB3-202ENST00000473079 MIR22HGQ0VDD5 57 aa6.94□□□□□ -1.3
EPHB3-202ENST00000473079 KRTAP25-1Q3LHN0 102 aa6.94□□□□□ -1.3
EPHB3-202ENST00000473079 KRTAP4-6Q9BYQ5 205 aa6.94□□□□□ -1.3
EPHB3-202ENST00000473079 PRO0628Q9UI54 55 aa6.9□□□□□ -1.3
EPHB3-202ENST00000473079 BRK1Q8WUW1 75 aa6.87□□□□□ -1.31
EPHB3-202ENST00000473079 AHNAK2Q8IVF2 5795 aa6.85□□□□□ -1.31
EPHB3-202ENST00000473079 A6NED7 52 aa6.85□□□□□ -1.31
EPHB3-202ENST00000473079 K7ERS5 55 aa6.84□□□□□ -1.31
EPHB3-202ENST00000473079 CDC42SE1Q9NRR8 79 aa6.82□□□□□ -1.32
EPHB3-202ENST00000473079 KRTAP5-5Q701N2 237 aaPredicted RBP6.8□□□□□ -1.32
EPHB3-202ENST00000473079 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
EPHB3-202ENST00000473079 KRTAP5-10Q6L8G5 202 aa6.78□□□□□ -1.32
EPHB3-202ENST00000473079 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
EPHB3-202ENST00000473079 SVIPQ8NHG7 77 aa6.72□□□□□ -1.33
EPHB3-202ENST00000473079 SPRR5A0A1B0GTR4 108 aa6.7□□□□□ -1.34
EPHB3-202ENST00000473079 KRTAP20-2Q3LI61 65 aa6.69□□□□□ -1.34
EPHB3-202ENST00000473079 KRTAP12-4P60329 112 aa6.63□□□□□ -1.35
EPHB3-202ENST00000473079 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
EPHB3-202ENST00000473079 KRTAP5-3Q6L8H2 238 aa6.61□□□□□ -1.35
EPHB3-202ENST00000473079 KRTAP15-1Q3LI76 137 aa6.6□□□□□ -1.35
EPHB3-202ENST00000473079 KRTAP5-7Q6L8G8 165 aa6.55□□□□□ -1.36
EPHB3-202ENST00000473079 LCE3CQ5T5A8 94 aa6.53□□□□□ -1.36
EPHB3-202ENST00000473079 PMAIP1Q13794 54 aa6.52□□□□□ -1.37
EPHB3-202ENST00000473079 SYNE1Q8NF91 8797 aaKnown RBP6.45□□□□□ -1.38
EPHB3-202ENST00000473079 KTN1-AS1Q86SY8 53 aa6.37□□□□□ -1.39
EPHB3-202ENST00000473079 ROMO1P60602 79 aa6.36□□□□□ -1.39
EPHB3-202ENST00000473079 MT1AP04731 61 aa6.29□□□□□ -1.4
EPHB3-202ENST00000473079 KRTAP6-1Q3LI64 71 aa6.24□□□□□ -1.41
EPHB3-202ENST00000473079 KRTAP5-2Q701N4 177 aa6.22□□□□□ -1.41
EPHB3-202ENST00000473079 KRTAP9-6A8MVA2 160 aa6.16□□□□□ -1.42
EPHB3-202ENST00000473079 KRTAP4-11Q9BYQ6 195 aa6.13□□□□□ -1.43
EPHB3-202ENST00000473079 KRTAP9-4Q9BYQ2 154 aa6.1□□□□□ -1.43
EPHB3-202ENST00000473079 KRTAP6-2Q3LI66 62 aa5.98□□□□□ -1.45
EPHB3-202ENST00000473079 PRAC1Q96KF2 57 aa5.95□□□□□ -1.46
EPHB3-202ENST00000473079 KRTAP5-8O75690 187 aa5.93□□□□□ -1.46
EPHB3-202ENST00000473079 MT3P25713 68 aa5.77□□□□□ -1.49
EPHB3-202ENST00000473079 OBSCNQ5VST9 7968 aa5.74□□□□□ -1.49
EPHB3-202ENST00000473079 MUC5ACP98088 5654 aa5.68□□□□□ -1.5
EPHB3-202ENST00000473079 MUC5BQ9HC84 5762 aaPredicted RBP5.66□□□□□ -1.5
EPHB3-202ENST00000473079 AHNAKQ09666 5890 aaKnown RBP5.65□□□□□ -1.51
EPHB3-202ENST00000473079 KRTAP9-9Q9BYP9 154 aa5.63□□□□□ -1.51
EPHB3-202ENST00000473079 KRTAP5-1Q6L8H4 278 aa5.58□□□□□ -1.52
EPHB3-202ENST00000473079 LCE1EQ5T753 118 aa5.36□□□□□ -1.55
EPHB3-202ENST00000473079 LUZP6Q538Z0 58 aa5.03□□□□□ -1.6
EPHB3-202ENST00000473079 KRTAP4-2Q9BYR5 136 aa5.03□□□□□ -1.6
EPHB3-202ENST00000473079 LCE1CQ5T751 118 aa4.96□□□□□ -1.62
EPHB3-202ENST00000473079 LCE1BQ5T7P3 118 aa4.96□□□□□ -1.62
EPHB3-202ENST00000473079 NDUFAF8A1L188 74 aa4.88□□□□□ -1.63
EPHB3-202ENST00000473079 LCE3DQ9BYE3 92 aa4.69□□□□□ -1.66
EPHB3-202ENST00000473079 H3BS24 57 aa4.54□□□□□ -1.68
EPHB3-202ENST00000473079 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
EPHB3-202ENST00000473079 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.51□□□□□ -1.69
EPHB3-202ENST00000473079 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
EPHB3-202ENST00000473079 A0A0A0MQY5 61 aa4.48□□□□□ -1.69
EPHB3-202ENST00000473079 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
EPHB3-202ENST00000473079 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.71
EPHB3-202ENST00000473079 INE1O15225 51 aa4.22□□□□□ -1.73
EPHB3-202ENST00000473079 KRTAP21-2Q3LI59 83 aa4.14□□□□□ -1.75
EPHB3-202ENST00000473079 PHGR1C9JFL3 82 aa3.93□□□□□ -1.78
EPHB3-202ENST00000473079 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
EPHB3-202ENST00000473079 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
EPHB3-202ENST00000473079 PRM1P04553 51 aa3.21□□□□□ -1.9
EPHB3-202ENST00000473079 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
EPHB3-202ENST00000473079 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 71.4 ms