RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 MT1HP80294 61 aa2.51□□□□□ -2.01
NUP35-208ENST00000472844 PRCDQ00LT1 54 aa2.51□□□□□ -2.01
NUP35-208ENST00000472844 S4R3F8 94 aa2.51□□□□□ -2.01
NUP35-208ENST00000472844 FLGP20930 4061 aaPredicted RBP2.51□□□□□ -2.01
NUP35-208ENST00000472844 RHPN1-AS1Q9BWJ2 59 aa2.5□□□□□ -2.01
NUP35-208ENST00000472844 RPL39P5Q59GN2 51 aa2.49□□□□□ -2.01
NUP35-208ENST00000472844 A0A096LPF7 62 aa2.48□□□□□ -2.01
NUP35-208ENST00000472844 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
NUP35-208ENST00000472844 KRTAP4-1Q9BYQ7 146 aa2.48□□□□□ -2.01
NUP35-208ENST00000472844 M0QY20 66 aa2.47□□□□□ -2.01
NUP35-208ENST00000472844 H3BNG1 76 aa2.44□□□□□ -2.02
NUP35-208ENST00000472844 KRTAP2-3P0C7H8 128 aa2.44□□□□□ -2.02
NUP35-208ENST00000472844 DEFB1P60022 68 aa2.44□□□□□ -2.02
NUP35-208ENST00000472844 KRTAP2-4Q9BYR9 128 aa2.44□□□□□ -2.02
NUP35-208ENST00000472844 SPINK6Q6UWN8 80 aa2.43□□□□□ -2.02
NUP35-208ENST00000472844 NOP10Q9NPE3 64 aaKnown RBP2.43□□□□□ -2.02
NUP35-208ENST00000472844 M0R2T5 61 aa2.42□□□□□ -2.02
NUP35-208ENST00000472844 KRTAP19-2Q3LHN2 52 aa2.42□□□□□ -2.02
NUP35-208ENST00000472844 CLPSL2Q6UWE3 100 aa2.41□□□□□ -2.02
NUP35-208ENST00000472844 TOMM7Q9P0U1 55 aa2.41□□□□□ -2.02
NUP35-208ENST00000472844 HTN1P15515 57 aa2.39□□□□□ -2.03
NUP35-208ENST00000472844 TMEM167AQ8TBQ9 72 aa2.38□□□□□ -2.03
NUP35-208ENST00000472844 A8MTW9 85 aa2.37□□□□□ -2.03
NUP35-208ENST00000472844 LINC01556Q5JQF7 62 aa2.36□□□□□ -2.03
NUP35-208ENST00000472844 K7EIM0 57 aa2.35□□□□□ -2.03
NUP35-208ENST00000472844 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
NUP35-208ENST00000472844 SPINK1P00995 79 aa2.33□□□□□ -2.04
NUP35-208ENST00000472844 KRTAP19-6Q3LI70 58 aa2.33□□□□□ -2.04
NUP35-208ENST00000472844 KRTAP2-1Q9BYU5 128 aa2.33□□□□□ -2.04
NUP35-208ENST00000472844 KRTAP12-3P60328 96 aa2.32□□□□□ -2.04
NUP35-208ENST00000472844 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
NUP35-208ENST00000472844 LCE3AQ5TA76 89 aa2.22□□□□□ -2.05
NUP35-208ENST00000472844 DSTQ03001 7570 aaKnown RBP2.21□□□□□ -2.06
NUP35-208ENST00000472844 A0A096LNI7 61 aa2.2□□□□□ -2.06
NUP35-208ENST00000472844 MT2AP02795 61 aa2.19□□□□□ -2.06
NUP35-208ENST00000472844 MT1FP04733 61 aa2.19□□□□□ -2.06
NUP35-208ENST00000472844 SPRR2EP22531 72 aa2.18□□□□□ -2.06
NUP35-208ENST00000472844 SPRR2BP35325 72 aa2.18□□□□□ -2.06
NUP35-208ENST00000472844 SPRR2AP35326 72 aa2.18□□□□□ -2.06
NUP35-208ENST00000472844 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
NUP35-208ENST00000472844 M0QZ58 72 aa2.12□□□□□ -2.07
NUP35-208ENST00000472844 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
NUP35-208ENST00000472844 SPRR2DP22532 72 aa2.11□□□□□ -2.07
NUP35-208ENST00000472844 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
NUP35-208ENST00000472844 SPRR2FQ96RM1 72 aa2.08□□□□□ -2.08
NUP35-208ENST00000472844 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
NUP35-208ENST00000472844 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
NUP35-208ENST00000472844 C9orf92A6NGG3 77 aa1.99□□□□□ -2.09
NUP35-208ENST00000472844 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
NUP35-208ENST00000472844 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
NUP35-208ENST00000472844 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
NUP35-208ENST00000472844 TNP1P09430 55 aa1.93□□□□□ -2.1
NUP35-208ENST00000472844 MT4P47944 62 aa1.91□□□□□ -2.1
NUP35-208ENST00000472844 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
NUP35-208ENST00000472844 KRTAP8-1Q8IUC2 63 aa1.87□□□□□ -2.11
NUP35-208ENST00000472844 RPS29P62273 56 aaKnown RBP1.85□□□□□ -2.11
NUP35-208ENST00000472844 MT1BP07438 61 aa1.84□□□□□ -2.11
NUP35-208ENST00000472844 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
NUP35-208ENST00000472844 PRM1P04553 51 aa1.72□□□□□ -2.13
NUP35-208ENST00000472844 KRTAP19-8Q3LI54 63 aa1.71□□□□□ -2.14
NUP35-208ENST00000472844 KRTAP19-3Q7Z4W3 81 aa1.68□□□□□ -2.14
NUP35-208ENST00000472844 SPRR2GQ9BYE4 73 aa1.63□□□□□ -2.15
NUP35-208ENST00000472844 KRTAP20-2Q3LI61 65 aa1.62□□□□□ -2.15
NUP35-208ENST00000472844 MT1XP80297 61 aa1.6□□□□□ -2.15
NUP35-208ENST00000472844 SYNE1Q8NF91 8797 aaKnown RBP1.55□□□□□ -2.16
NUP35-208ENST00000472844 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
NUP35-208ENST00000472844 MT1EP04732 61 aa1.44□□□□□ -2.18
NUP35-208ENST00000472844 KRTAP19-7Q3SYF9 63 aa1.43□□□□□ -2.18
NUP35-208ENST00000472844 MT1MQ8N339 61 aa1.42□□□□□ -2.18
NUP35-208ENST00000472844 MT1GP13640 62 aa1.41□□□□□ -2.18
NUP35-208ENST00000472844 MT1AP04731 61 aa1.35□□□□□ -2.19
NUP35-208ENST00000472844 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
NUP35-208ENST00000472844 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
NUP35-208ENST00000472844 MT1LQ93083 61 aa1.28□□□□□ -2.2
NUP35-208ENST00000472844 KRTAP6-2Q3LI66 62 aa1.27□□□□□ -2.21
NUP35-208ENST00000472844 KRTAP19-5Q3LI72 72 aa1.27□□□□□ -2.21
NUP35-208ENST00000472844 KRTAP6-1Q3LI64 71 aa1.13□□□□□ -2.23
NUP35-208ENST00000472844 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 43.3 ms