RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 KRTAP2-3P0C7H8 128 aa7.22□□□□□ -1.25
SF1-213ENST00000472725 LCE5AQ5TCM9 118 aa7.22□□□□□ -1.25
SF1-213ENST00000472725 KRTAP2-4Q9BYR9 128 aa7.22□□□□□ -1.25
SF1-213ENST00000472725 KRTAP12-3P60328 96 aa7.2□□□□□ -1.26
SF1-213ENST00000472725 BRK1Q8WUW1 75 aa7.2□□□□□ -1.26
SF1-213ENST00000472725 MT1GP13640 62 aa7.17□□□□□ -1.26
SF1-213ENST00000472725 MT1LQ93083 61 aa7.14□□□□□ -1.27
SF1-213ENST00000472725 PP632Q6XCG6 107 aa7.13□□□□□ -1.27
SF1-213ENST00000472725 LCE3BQ5TA77 95 aa7.04□□□□□ -1.28
SF1-213ENST00000472725 KRTAP2-2Q9BYT5 123 aa7.02□□□□□ -1.29
SF1-213ENST00000472725 KRTAP2-1Q9BYU5 128 aa7.02□□□□□ -1.29
SF1-213ENST00000472725 MT1MQ8N339 61 aa7□□□□□ -1.29
SF1-213ENST00000472725 KRTAP19-4Q3LI73 84 aa6.99□□□□□ -1.29
SF1-213ENST00000472725 KRTAP15-1Q3LI76 137 aa6.89□□□□□ -1.31
SF1-213ENST00000472725 PMAIP1Q13794 54 aa6.83□□□□□ -1.32
SF1-213ENST00000472725 KRTAP4-7Q9BYR0 210 aa6.73□□□□□ -1.33
SF1-213ENST00000472725 KRTAP4-3Q9BYR4 195 aa6.73□□□□□ -1.33
SF1-213ENST00000472725 PRO0628Q9UI54 55 aa6.72□□□□□ -1.33
SF1-213ENST00000472725 DSTQ03001 7570 aaKnown RBP6.7□□□□□ -1.34
SF1-213ENST00000472725 LCE3CQ5T5A8 94 aa6.67□□□□□ -1.34
SF1-213ENST00000472725 LCE4AQ5TA78 99 aa6.51□□□□□ -1.37
SF1-213ENST00000472725 KRTAP5-4Q6L8H1 288 aa6.46□□□□□ -1.38
SF1-213ENST00000472725 KRTAP5-5Q701N2 237 aaPredicted RBP6.4□□□□□ -1.38
SF1-213ENST00000472725 PRAC1Q96KF2 57 aa6.38□□□□□ -1.39
SF1-213ENST00000472725 KRTAP4-9Q9BYQ8 210 aa6.36□□□□□ -1.39
SF1-213ENST00000472725 LOC100996750A0A140TA64 210 aa6.35□□□□□ -1.39
SF1-213ENST00000472725 LCE1DQ5T752 114 aa6.32□□□□□ -1.4
SF1-213ENST00000472725 KTN1-AS1Q86SY8 53 aa6.32□□□□□ -1.4
SF1-213ENST00000472725 MT4P47944 62 aa6.28□□□□□ -1.4
SF1-213ENST00000472725 KRTAP9-6A8MVA2 160 aa6.22□□□□□ -1.41
SF1-213ENST00000472725 KRTAP12-4P60329 112 aa6.16□□□□□ -1.42
SF1-213ENST00000472725 KRTAP4-6Q9BYQ5 205 aa6.15□□□□□ -1.42
SF1-213ENST00000472725 SPRR5A0A1B0GTR4 108 aa6.12□□□□□ -1.43
SF1-213ENST00000472725 MT1AP04731 61 aa6.11□□□□□ -1.43
SF1-213ENST00000472725 HMCN1Q96RW7 5635 aa6.06□□□□□ -1.44
SF1-213ENST00000472725 KRTAP20-2Q3LI61 65 aa6.03□□□□□ -1.44
SF1-213ENST00000472725 KRTAP6-1Q3LI64 71 aa5.99□□□□□ -1.45
SF1-213ENST00000472725 SYNE1Q8NF91 8797 aaKnown RBP5.96□□□□□ -1.46
SF1-213ENST00000472725 SVIPQ8NHG7 77 aa5.95□□□□□ -1.46
SF1-213ENST00000472725 KRTAP9-4Q9BYQ2 154 aa5.86□□□□□ -1.47
SF1-213ENST00000472725 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
SF1-213ENST00000472725 KRTAP5-2Q701N4 177 aa5.74□□□□□ -1.49
SF1-213ENST00000472725 AHNAK2Q8IVF2 5795 aa5.66□□□□□ -1.5
SF1-213ENST00000472725 KRTAP5-10Q6L8G5 202 aa5.66□□□□□ -1.5
SF1-213ENST00000472725 GPR98Q8WXG9 6306 aa5.65□□□□□ -1.5
SF1-213ENST00000472725 KRTAP6-2Q3LI66 62 aa5.64□□□□□ -1.51
SF1-213ENST00000472725 MT3P25713 68 aa5.59□□□□□ -1.51
SF1-213ENST00000472725 LUZP6Q538Z0 58 aa5.45□□□□□ -1.54
SF1-213ENST00000472725 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
SF1-213ENST00000472725 KRTAP4-11Q9BYQ6 195 aa5.41□□□□□ -1.54
SF1-213ENST00000472725 KRTAP5-8O75690 187 aa5.21□□□□□ -1.58
SF1-213ENST00000472725 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.6
SF1-213ENST00000472725 LCE1EQ5T753 118 aa5.06□□□□□ -1.6
SF1-213ENST00000472725 KRTAP5-1Q6L8H4 278 aa5.04□□□□□ -1.6
SF1-213ENST00000472725 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
SF1-213ENST00000472725 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
SF1-213ENST00000472725 KRTAP4-12Q9BQ66 201 aa4.81□□□□□ -1.64
SF1-213ENST00000472725 H3BS24 57 aa4.74□□□□□ -1.65
SF1-213ENST00000472725 MUC5ACP98088 5654 aa4.74□□□□□ -1.65
SF1-213ENST00000472725 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
SF1-213ENST00000472725 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
SF1-213ENST00000472725 LCE1CQ5T751 118 aa4.68□□□□□ -1.66
SF1-213ENST00000472725 LCE1BQ5T7P3 118 aa4.68□□□□□ -1.66
SF1-213ENST00000472725 KRTAP4-2Q9BYR5 136 aa4.66□□□□□ -1.66
SF1-213ENST00000472725 MUC5BQ9HC84 5762 aaPredicted RBP4.57□□□□□ -1.68
SF1-213ENST00000472725 AHNAKQ09666 5890 aaKnown RBP4.48□□□□□ -1.69
SF1-213ENST00000472725 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
SF1-213ENST00000472725 KRTAP5-11Q6L8G4 156 aa4.19□□□□□ -1.74
SF1-213ENST00000472725 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
SF1-213ENST00000472725 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
SF1-213ENST00000472725 INE1O15225 51 aa3.97□□□□□ -1.77
SF1-213ENST00000472725 KRTAP21-2Q3LI59 83 aa3.96□□□□□ -1.78
SF1-213ENST00000472725 PRM1P04553 51 aa3.73□□□□□ -1.81
SF1-213ENST00000472725 PHGR1C9JFL3 82 aa3.59□□□□□ -1.83
SF1-213ENST00000472725 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
SF1-213ENST00000472725 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
SF1-213ENST00000472725 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
SF1-213ENST00000472725 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 13.5 ms