RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 RPS28P62857 69 aaKnown RBP2.16□□□□□ -2.06
SIK3-208ENST00000472648 KRTAP19-7Q3SYF9 63 aa2.16□□□□□ -2.06
SIK3-208ENST00000472648 UQCR11O14957 56 aa2.15□□□□□ -2.07
SIK3-208ENST00000472648 PSPHP1O15172 72 aa2.15□□□□□ -2.07
SIK3-208ENST00000472648 MT1GP13640 62 aa2.15□□□□□ -2.07
SIK3-208ENST00000472648 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.07
SIK3-208ENST00000472648 SPATA8Q6RVD6 105 aa2.15□□□□□ -2.07
SIK3-208ENST00000472648 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
SIK3-208ENST00000472648 Q1T7F1 81 aa2.14□□□□□ -2.07
SIK3-208ENST00000472648 SPINT4Q6UDR6 99 aa2.14□□□□□ -2.07
SIK3-208ENST00000472648 CAMK2N1Q7Z7J9 78 aa2.14□□□□□ -2.07
SIK3-208ENST00000472648 KRTAP13-4Q3LI77 160 aa2.12□□□□□ -2.07
SIK3-208ENST00000472648 A6NED7 52 aa2.11□□□□□ -2.07
SIK3-208ENST00000472648 K7ERS5 55 aa2.11□□□□□ -2.07
SIK3-208ENST00000472648 MIR22HGQ0VDD5 57 aa2.11□□□□□ -2.07
SIK3-208ENST00000472648 MT1MQ8N339 61 aa2.11□□□□□ -2.07
SIK3-208ENST00000472648 A8MU10 97 aa2.09□□□□□ -2.07
SIK3-208ENST00000472648 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.08
SIK3-208ENST00000472648 KRTAP4-7Q9BYR0 210 aa2.08□□□□□ -2.08
SIK3-208ENST00000472648 KRTAP4-11Q9BYQ6 195 aa2.06□□□□□ -2.08
SIK3-208ENST00000472648 KRTAP4-3Q9BYR4 195 aa2.06□□□□□ -2.08
SIK3-208ENST00000472648 KRTAP12-1P59990 96 aa2.05□□□□□ -2.08
SIK3-208ENST00000472648 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
SIK3-208ENST00000472648 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
SIK3-208ENST00000472648 KRTAP19-5Q3LI72 72 aa2.01□□□□□ -2.09
SIK3-208ENST00000472648 MT1LQ93083 61 aa2.01□□□□□ -2.09
SIK3-208ENST00000472648 CDC42SE1Q9NRR8 79 aa2.01□□□□□ -2.09
SIK3-208ENST00000472648 KRTAP9-9Q9BYP9 154 aa1.99□□□□□ -2.09
SIK3-208ENST00000472648 TNP1P09430 55 aa1.98□□□□□ -2.09
SIK3-208ENST00000472648 BRK1Q8WUW1 75 aa1.98□□□□□ -2.09
SIK3-208ENST00000472648 KRTAP5-5Q701N2 237 aaPredicted RBP1.95□□□□□ -2.1
SIK3-208ENST00000472648 C10orf95Q9H7T3 257 aa1.94□□□□□ -2.1
SIK3-208ENST00000472648 ROMO1P60602 79 aa1.93□□□□□ -2.1
SIK3-208ENST00000472648 KRTAP25-1Q3LHN0 102 aa1.92□□□□□ -2.1
SIK3-208ENST00000472648 SYNE1Q8NF91 8797 aaKnown RBP1.91□□□□□ -2.1
SIK3-208ENST00000472648 LOC100996750A0A140TA64 210 aa1.91□□□□□ -2.1
SIK3-208ENST00000472648 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
SIK3-208ENST00000472648 PMAIP1Q13794 54 aa1.87□□□□□ -2.11
SIK3-208ENST00000472648 LCE3AQ5TA76 89 aa1.87□□□□□ -2.11
SIK3-208ENST00000472648 OBSCNQ5VST9 7968 aa1.86□□□□□ -2.11
SIK3-208ENST00000472648 KRTAP23-1A1A580 65 aa1.83□□□□□ -2.12
SIK3-208ENST00000472648 PRO0628Q9UI54 55 aa1.83□□□□□ -2.12
SIK3-208ENST00000472648 KRTAP12-3P60328 96 aa1.82□□□□□ -2.12
SIK3-208ENST00000472648 KRTAP9-4Q9BYQ2 154 aa1.76□□□□□ -2.13
SIK3-208ENST00000472648 KRTAP5-1Q6L8H4 278 aa1.75□□□□□ -2.13
SIK3-208ENST00000472648 KRTAP15-1Q3LI76 137 aa1.74□□□□□ -2.13
SIK3-208ENST00000472648 KRTAP6-2Q3LI66 62 aa1.73□□□□□ -2.13
SIK3-208ENST00000472648 KRTAP6-1Q3LI64 71 aa1.72□□□□□ -2.13
SIK3-208ENST00000472648 KRTAP19-4Q3LI73 84 aa1.72□□□□□ -2.13
SIK3-208ENST00000472648 KTN1-AS1Q86SY8 53 aa1.72□□□□□ -2.13
SIK3-208ENST00000472648 PRAC1Q96KF2 57 aa1.72□□□□□ -2.13
SIK3-208ENST00000472648 MT1AP04731 61 aa1.71□□□□□ -2.14
SIK3-208ENST00000472648 SVIPQ8NHG7 77 aa1.7□□□□□ -2.14
SIK3-208ENST00000472648 LCE3CQ5T5A8 94 aa1.68□□□□□ -2.14
SIK3-208ENST00000472648 H3BS24 57 aa1.65□□□□□ -2.15
SIK3-208ENST00000472648 MT3P25713 68 aa1.59□□□□□ -2.15
SIK3-208ENST00000472648 LCE1EQ5T753 118 aa1.54□□□□□ -2.16
SIK3-208ENST00000472648 KRTAP4-2Q9BYR5 136 aa1.53□□□□□ -2.16
SIK3-208ENST00000472648 LUZP6Q538Z0 58 aa1.52□□□□□ -2.17
SIK3-208ENST00000472648 KRTAP4-12Q9BQ66 201 aa1.52□□□□□ -2.17
SIK3-208ENST00000472648 KRTAP9-6A8MVA2 160 aa1.51□□□□□ -2.17
SIK3-208ENST00000472648 LCE1BQ5T7P3 118 aa1.51□□□□□ -2.17
SIK3-208ENST00000472648 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
SIK3-208ENST00000472648 LCE1CQ5T751 118 aa1.43□□□□□ -2.18
SIK3-208ENST00000472648 KRTAP5-11Q6L8G4 156 aa1.43□□□□□ -2.18
SIK3-208ENST00000472648 LCE1FQ5T754 118 aa1.4□□□□□ -2.19
SIK3-208ENST00000472648 NDUFAF8A1L188 74 aa1.32□□□□□ -2.2
SIK3-208ENST00000472648 A0A0A0MQY5 61 aa1.29□□□□□ -2.2
SIK3-208ENST00000472648 LCE3DQ9BYE3 92 aa1.26□□□□□ -2.21
SIK3-208ENST00000472648 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.25□□□□□ -2.21
SIK3-208ENST00000472648 LCE3EQ5T5B0 92 aa1.21□□□□□ -2.22
SIK3-208ENST00000472648 MUC19Q7Z5P9 8384 aa1.16□□□□□ -2.22
SIK3-208ENST00000472648 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
SIK3-208ENST00000472648 KRTAP21-2Q3LI59 83 aa1.13□□□□□ -2.23
SIK3-208ENST00000472648 KRTAP4-4Q9BYR3 166 aa1.11□□□□□ -2.23
SIK3-208ENST00000472648 INE1O15225 51 aa1.1□□□□□ -2.23
SIK3-208ENST00000472648 PRM1P04553 51 aa0.98□□□□□ -2.25
SIK3-208ENST00000472648 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 29.8 ms