RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 LCE3AQ5TA76 89 aa6.39□□□□□ -1.39
PKD1-208ENST00000472577 MT1EP04732 61 aa6.37□□□□□ -1.39
PKD1-208ENST00000472577 KRTAP19-5Q3LI72 72 aa6.37□□□□□ -1.39
PKD1-208ENST00000472577 DSTQ03001 7570 aaKnown RBP6.34□□□□□ -1.39
PKD1-208ENST00000472577 KRTAP25-1Q3LHN0 102 aa6.32□□□□□ -1.4
PKD1-208ENST00000472577 KRTAP4-9Q9BYQ8 210 aa6.32□□□□□ -1.4
PKD1-208ENST00000472577 KRTAP19-3Q7Z4W3 81 aa6.24□□□□□ -1.41
PKD1-208ENST00000472577 LCE5AQ5TCM9 118 aa6.23□□□□□ -1.41
PKD1-208ENST00000472577 KRTAP23-1A1A580 65 aa6.18□□□□□ -1.42
PKD1-208ENST00000472577 PRO0628Q9UI54 55 aa6.18□□□□□ -1.42
PKD1-208ENST00000472577 ROMO1P60602 79 aa6.17□□□□□ -1.42
PKD1-208ENST00000472577 MT1LQ93083 61 aa6.15□□□□□ -1.42
PKD1-208ENST00000472577 KRTAP12-3P60328 96 aa6.13□□□□□ -1.43
PKD1-208ENST00000472577 LCE1DQ5T752 114 aa6.13□□□□□ -1.43
PKD1-208ENST00000472577 MT1GP13640 62 aa6.12□□□□□ -1.43
PKD1-208ENST00000472577 PP632Q6XCG6 107 aa6.04□□□□□ -1.44
PKD1-208ENST00000472577 MT1MQ8N339 61 aa6.04□□□□□ -1.44
PKD1-208ENST00000472577 BRK1Q8WUW1 75 aa6.04□□□□□ -1.44
PKD1-208ENST00000472577 MT4P47944 62 aa6□□□□□ -1.45
PKD1-208ENST00000472577 HMCN1Q96RW7 5635 aa5.99□□□□□ -1.45
PKD1-208ENST00000472577 LCE4AQ5TA78 99 aa5.94□□□□□ -1.46
PKD1-208ENST00000472577 KRTAP4-3Q9BYR4 195 aa5.92□□□□□ -1.46
PKD1-208ENST00000472577 AHNAK2Q8IVF2 5795 aa5.91□□□□□ -1.46
PKD1-208ENST00000472577 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.46
PKD1-208ENST00000472577 KRTAP4-7Q9BYR0 210 aa5.89□□□□□ -1.47
PKD1-208ENST00000472577 KRTAP5-10Q6L8G5 202 aa5.88□□□□□ -1.47
PKD1-208ENST00000472577 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
PKD1-208ENST00000472577 KRTAP5-4Q6L8H1 288 aa5.82□□□□□ -1.48
PKD1-208ENST00000472577 KRTAP4-6Q9BYQ5 205 aa5.81□□□□□ -1.48
PKD1-208ENST00000472577 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
PKD1-208ENST00000472577 LCE3CQ5T5A8 94 aa5.68□□□□□ -1.5
PKD1-208ENST00000472577 KRTAP5-7Q6L8G8 165 aa5.68□□□□□ -1.5
PKD1-208ENST00000472577 KRTAP5-3Q6L8H2 238 aa5.65□□□□□ -1.5
PKD1-208ENST00000472577 KTN1-AS1Q86SY8 53 aa5.64□□□□□ -1.51
PKD1-208ENST00000472577 SPRR5A0A1B0GTR4 108 aa5.61□□□□□ -1.51
PKD1-208ENST00000472577 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
PKD1-208ENST00000472577 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
PKD1-208ENST00000472577 KRTAP5-5Q701N2 237 aaPredicted RBP5.51□□□□□ -1.53
PKD1-208ENST00000472577 PRAC1Q96KF2 57 aa5.4□□□□□ -1.54
PKD1-208ENST00000472577 KRTAP9-6A8MVA2 160 aa5.39□□□□□ -1.55
PKD1-208ENST00000472577 KRTAP12-4P60329 112 aa5.3□□□□□ -1.56
PKD1-208ENST00000472577 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
PKD1-208ENST00000472577 MT1AP04731 61 aa5.23□□□□□ -1.57
PKD1-208ENST00000472577 AHNAKQ09666 5890 aaKnown RBP5.2□□□□□ -1.58
PKD1-208ENST00000472577 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
PKD1-208ENST00000472577 KRTAP4-11Q9BYQ6 195 aa5.12□□□□□ -1.59
PKD1-208ENST00000472577 KRTAP5-2Q701N4 177 aa5.04□□□□□ -1.6
PKD1-208ENST00000472577 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
PKD1-208ENST00000472577 MUC5ACP98088 5654 aa5.01□□□□□ -1.61
PKD1-208ENST00000472577 MUC5BQ9HC84 5762 aaPredicted RBP4.99□□□□□ -1.61
PKD1-208ENST00000472577 KRTAP5-8O75690 187 aa4.98□□□□□ -1.61
PKD1-208ENST00000472577 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
PKD1-208ENST00000472577 H3BS24 57 aa4.82□□□□□ -1.64
PKD1-208ENST00000472577 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
PKD1-208ENST00000472577 MT3P25713 68 aa4.75□□□□□ -1.65
PKD1-208ENST00000472577 KRTAP9-9Q9BYP9 154 aa4.73□□□□□ -1.65
PKD1-208ENST00000472577 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
PKD1-208ENST00000472577 LUZP6Q538Z0 58 aa4.55□□□□□ -1.68
PKD1-208ENST00000472577 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
PKD1-208ENST00000472577 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
PKD1-208ENST00000472577 A0A0A0MQY5 61 aa4.15□□□□□ -1.75
PKD1-208ENST00000472577 LCE3DQ9BYE3 92 aa4.15□□□□□ -1.75
PKD1-208ENST00000472577 KRTAP4-2Q9BYR5 136 aa4.08□□□□□ -1.76
PKD1-208ENST00000472577 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
PKD1-208ENST00000472577 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
PKD1-208ENST00000472577 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
PKD1-208ENST00000472577 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.79
PKD1-208ENST00000472577 INE1O15225 51 aa3.83□□□□□ -1.8
PKD1-208ENST00000472577 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
PKD1-208ENST00000472577 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
PKD1-208ENST00000472577 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
PKD1-208ENST00000472577 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
PKD1-208ENST00000472577 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
PKD1-208ENST00000472577 PRM1P04553 51 aa3.17□□□□□ -1.9
PKD1-208ENST00000472577 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
PKD1-208ENST00000472577 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
PKD1-208ENST00000472577 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
PKD1-208ENST00000472577 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms