RNA–Protein interactions for RNA: ENST00000472305.1

SEC16A-209, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 3

Gene SEC16A, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-209ENST00000472305 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
SEC16A-209ENST00000472305 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
SEC16A-209ENST00000472305 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
SEC16A-209ENST00000472305 KRTAP25-1Q3LHN0 102 aa4.78□□□□□ -1.64
SEC16A-209ENST00000472305 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
SEC16A-209ENST00000472305 MT1EP04732 61 aa4.76□□□□□ -1.65
SEC16A-209ENST00000472305 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
SEC16A-209ENST00000472305 ROMO1P60602 79 aa4.75□□□□□ -1.65
SEC16A-209ENST00000472305 BRK1Q8WUW1 75 aa4.75□□□□□ -1.65
SEC16A-209ENST00000472305 PRO0628Q9UI54 55 aa4.71□□□□□ -1.66
SEC16A-209ENST00000472305 AHNAK2Q8IVF2 5795 aa4.64□□□□□ -1.67
SEC16A-209ENST00000472305 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
SEC16A-209ENST00000472305 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
SEC16A-209ENST00000472305 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
SEC16A-209ENST00000472305 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
SEC16A-209ENST00000472305 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
SEC16A-209ENST00000472305 MT1LQ93083 61 aa4.6□□□□□ -1.67
SEC16A-209ENST00000472305 KRTAP23-1A1A580 65 aa4.59□□□□□ -1.67
SEC16A-209ENST00000472305 MT1GP13640 62 aa4.54□□□□□ -1.68
SEC16A-209ENST00000472305 MT1MQ8N339 61 aa4.51□□□□□ -1.69
SEC16A-209ENST00000472305 PMAIP1Q13794 54 aa4.49□□□□□ -1.69
SEC16A-209ENST00000472305 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
SEC16A-209ENST00000472305 PP632Q6XCG6 107 aa4.48□□□□□ -1.69
SEC16A-209ENST00000472305 KRTAP4-7Q9BYR0 210 aa4.46□□□□□ -1.7
SEC16A-209ENST00000472305 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
SEC16A-209ENST00000472305 LCE1DQ5T752 114 aa4.44□□□□□ -1.7
SEC16A-209ENST00000472305 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
SEC16A-209ENST00000472305 KRTAP5-7Q6L8G8 165 aa4.4□□□□□ -1.71
SEC16A-209ENST00000472305 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
SEC16A-209ENST00000472305 MT4P47944 62 aa4.29□□□□□ -1.72
SEC16A-209ENST00000472305 LCE3CQ5T5A8 94 aa4.29□□□□□ -1.72
SEC16A-209ENST00000472305 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
SEC16A-209ENST00000472305 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
SEC16A-209ENST00000472305 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
SEC16A-209ENST00000472305 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
SEC16A-209ENST00000472305 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
SEC16A-209ENST00000472305 KRTAP5-3Q6L8H2 238 aa4.21□□□□□ -1.74
SEC16A-209ENST00000472305 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
SEC16A-209ENST00000472305 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
SEC16A-209ENST00000472305 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
SEC16A-209ENST00000472305 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.75
SEC16A-209ENST00000472305 AHNAKQ09666 5890 aaKnown RBP4.09□□□□□ -1.76
SEC16A-209ENST00000472305 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
SEC16A-209ENST00000472305 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
SEC16A-209ENST00000472305 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
SEC16A-209ENST00000472305 MT1AP04731 61 aa3.91□□□□□ -1.78
SEC16A-209ENST00000472305 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
SEC16A-209ENST00000472305 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
SEC16A-209ENST00000472305 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
SEC16A-209ENST00000472305 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
SEC16A-209ENST00000472305 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
SEC16A-209ENST00000472305 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
SEC16A-209ENST00000472305 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
SEC16A-209ENST00000472305 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
SEC16A-209ENST00000472305 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
SEC16A-209ENST00000472305 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
SEC16A-209ENST00000472305 MT3P25713 68 aa3.54□□□□□ -1.84
SEC16A-209ENST00000472305 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
SEC16A-209ENST00000472305 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
SEC16A-209ENST00000472305 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
SEC16A-209ENST00000472305 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
SEC16A-209ENST00000472305 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
SEC16A-209ENST00000472305 INE1O15225 51 aa3.08□□□□□ -1.92
SEC16A-209ENST00000472305 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
SEC16A-209ENST00000472305 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
SEC16A-209ENST00000472305 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
SEC16A-209ENST00000472305 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
SEC16A-209ENST00000472305 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
SEC16A-209ENST00000472305 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
SEC16A-209ENST00000472305 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
SEC16A-209ENST00000472305 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
SEC16A-209ENST00000472305 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
SEC16A-209ENST00000472305 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
SEC16A-209ENST00000472305 PRM1P04553 51 aa2.48□□□□□ -2.01
SEC16A-209ENST00000472305 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
SEC16A-209ENST00000472305 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
SEC16A-209ENST00000472305 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
SEC16A-209ENST00000472305 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms