RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 NDUFC1O43677 76 aa1.06□□□□□ -2.24
HDAC9-221ENST00000471887 SMIM6P0DI80 62 aa1.06□□□□□ -2.24
HDAC9-221ENST00000471887 PLAC4Q8WY50 150 aa1.05□□□□□ -2.24
HDAC9-221ENST00000471887 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
HDAC9-221ENST00000471887 DSTQ03001 7570 aaKnown RBP1.05□□□□□ -2.24
HDAC9-221ENST00000471887 ATOX1O00244 68 aa1.04□□□□□ -2.24
HDAC9-221ENST00000471887 C20orf197Q8N268 126 aa1.04□□□□□ -2.24
HDAC9-221ENST00000471887 SPCS1Q9Y6A9 102 aa1.04□□□□□ -2.24
HDAC9-221ENST00000471887 UQCRQO14949 82 aa1.03□□□□□ -2.24
HDAC9-221ENST00000471887 ACYP1P07311 99 aa1.03□□□□□ -2.24
HDAC9-221ENST00000471887 BATFQ16520 125 aa1.03□□□□□ -2.24
HDAC9-221ENST00000471887 ATP5EP2Q5VTU8 51 aa1.03□□□□□ -2.24
HDAC9-221ENST00000471887 K7EP34 96 aa1.02□□□□□ -2.25
HDAC9-221ENST00000471887 M0QZ58 72 aa1.02□□□□□ -2.25
HDAC9-221ENST00000471887 H0Y9P7 68 aa1.01□□□□□ -2.25
HDAC9-221ENST00000471887 DMAC1Q96GE9 116 aa1.01□□□□□ -2.25
HDAC9-221ENST00000471887 F8W1H4 67 aa1□□□□□ -2.25
HDAC9-221ENST00000471887 KRTAP19-7Q3SYF9 63 aa1□□□□□ -2.25
HDAC9-221ENST00000471887 COL5A1-AS1Q5SY13 56 aa1□□□□□ -2.25
HDAC9-221ENST00000471887 KRTAP19-3Q7Z4W3 81 aa1□□□□□ -2.25
HDAC9-221ENST00000471887 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
HDAC9-221ENST00000471887 MT1EP04732 61 aa0.99□□□□□ -2.25
HDAC9-221ENST00000471887 ETDBQ3ZM63 59 aa0.99□□□□□ -2.25
HDAC9-221ENST00000471887 TRAV7A0A075B6U4 112 aa0.98□□□□□ -2.25
HDAC9-221ENST00000471887 Q1T7F1 81 aa0.98□□□□□ -2.25
HDAC9-221ENST00000471887 LINC01554Q52M75 96 aa0.98□□□□□ -2.25
HDAC9-221ENST00000471887 GTF2H5Q6ZYL4 71 aa0.98□□□□□ -2.25
HDAC9-221ENST00000471887 LINC00208Q96KT6 92 aa0.98□□□□□ -2.25
HDAC9-221ENST00000471887 LOC105371267A0A1B0GV96 52 aa0.97□□□□□ -2.25
HDAC9-221ENST00000471887 HIST1H4AP62805 103 aaKnown RBP0.97□□□□□ -2.25
HDAC9-221ENST00000471887 LINC00643Q86TS7 51 aa0.97□□□□□ -2.25
HDAC9-221ENST00000471887 MT-ATP8P03928 68 aa0.96□□□□□ -2.26
HDAC9-221ENST00000471887 MT1GP13640 62 aa0.96□□□□□ -2.26
HDAC9-221ENST00000471887 SPTSSBQ8NFR3 76 aa0.95□□□□□ -2.26
HDAC9-221ENST00000471887 ACYP2P14621 99 aa0.94□□□□□ -2.26
HDAC9-221ENST00000471887 MT4P47944 62 aa0.94□□□□□ -2.26
HDAC9-221ENST00000471887 MT1MQ8N339 61 aa0.94□□□□□ -2.26
HDAC9-221ENST00000471887 MT1LQ93083 61 aa0.94□□□□□ -2.26
HDAC9-221ENST00000471887 KRTAP19-5Q3LI72 72 aa0.93□□□□□ -2.26
HDAC9-221ENST00000471887 A0A0D9SG42 100 aa0.91□□□□□ -2.26
HDAC9-221ENST00000471887 CHKB-CPT1BH3BT56 60 aa0.9□□□□□ -2.27
HDAC9-221ENST00000471887 KRTAP20-2Q3LI61 65 aa0.9□□□□□ -2.27
HDAC9-221ENST00000471887 SMIM20Q8N5G0 67 aa0.9□□□□□ -2.27
HDAC9-221ENST00000471887 SCGB1A1P11684 91 aa0.89□□□□□ -2.27
HDAC9-221ENST00000471887 J3QR89 54 aa0.88□□□□□ -2.27
HDAC9-221ENST00000471887 C10orf95Q9H7T3 257 aa0.88□□□□□ -2.27
HDAC9-221ENST00000471887 SYNE1Q8NF91 8797 aaKnown RBP0.87□□□□□ -2.27
HDAC9-221ENST00000471887 SNURFQ9Y675 71 aa0.87□□□□□ -2.27
HDAC9-221ENST00000471887 TNP1P09430 55 aa0.85□□□□□ -2.27
HDAC9-221ENST00000471887 SPATA8Q6RVD6 105 aa0.85□□□□□ -2.27
HDAC9-221ENST00000471887 SERP1Q9Y6X1 66 aa0.85□□□□□ -2.27
HDAC9-221ENST00000471887 AHNAKQ09666 5890 aaKnown RBP0.84□□□□□ -2.27
HDAC9-221ENST00000471887 A0A1B0GV90 55 aa0.84□□□□□ -2.27
HDAC9-221ENST00000471887 MUC5ACP98088 5654 aa0.84□□□□□ -2.28
HDAC9-221ENST00000471887 MUC5BQ9HC84 5762 aaPredicted RBP0.83□□□□□ -2.28
HDAC9-221ENST00000471887 SERP2Q8N6R1 65 aa0.83□□□□□ -2.28
HDAC9-221ENST00000471887 MT1AP04731 61 aa0.81□□□□□ -2.28
HDAC9-221ENST00000471887 A0A1B0GU69 56 aa0.8□□□□□ -2.28
HDAC9-221ENST00000471887 K7ERU9 68 aa0.8□□□□□ -2.28
HDAC9-221ENST00000471887 H7BZZ5 65 aa0.79□□□□□ -2.28
HDAC9-221ENST00000471887 COX7CP15954 63 aa0.78□□□□□ -2.28
HDAC9-221ENST00000471887 KRTAP6-1Q3LI64 71 aa0.78□□□□□ -2.28
HDAC9-221ENST00000471887 PRR15LQ9BU68 103 aa0.77□□□□□ -2.29
HDAC9-221ENST00000471887 LINC01558Q9Y6Z2 57 aa0.76□□□□□ -2.29
HDAC9-221ENST00000471887 KRTAP6-2Q3LI66 62 aa0.75□□□□□ -2.29
HDAC9-221ENST00000471887 UQCR11O14957 56 aa0.74□□□□□ -2.29
HDAC9-221ENST00000471887 ATP5EP56381 51 aaPredicted RBP0.73□□□□□ -2.29
HDAC9-221ENST00000471887 MIR22HGQ0VDD5 57 aa0.7□□□□□ -2.3
HDAC9-221ENST00000471887 CCDC179H3BU77 68 aa0.68□□□□□ -2.3
HDAC9-221ENST00000471887 CDC42SE1Q9NRR8 79 aa0.67□□□□□ -2.3
HDAC9-221ENST00000471887 RPS28P62857 69 aaKnown RBP0.66□□□□□ -2.3
HDAC9-221ENST00000471887 ROMO1P60602 79 aa0.65□□□□□ -2.31
HDAC9-221ENST00000471887 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
HDAC9-221ENST00000471887 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
HDAC9-221ENST00000471887 PMAIP1Q13794 54 aa0.54□□□□□ -2.32
HDAC9-221ENST00000471887 INE1O15225 51 aa0.5□□□□□ -2.33
HDAC9-221ENST00000471887 BRK1Q8WUW1 75 aa0.43□□□□□ -2.34
HDAC9-221ENST00000471887 PRM1P04553 51 aa0.32□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 73.6 ms