RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 MT1GP13640 62 aa4.16□□□□□ -1.74
COL4A3-205ENST00000471862 A8MU10 97 aa4.15□□□□□ -1.75
COL4A3-205ENST00000471862 MT1LQ93083 61 aa4.11□□□□□ -1.75
COL4A3-205ENST00000471862 ATP5EP56381 51 aaPredicted RBP4.1□□□□□ -1.75
COL4A3-205ENST00000471862 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
COL4A3-205ENST00000471862 MT1MQ8N339 61 aa4.1□□□□□ -1.75
COL4A3-205ENST00000471862 C10orf95Q9H7T3 257 aa4.1□□□□□ -1.75
COL4A3-205ENST00000471862 CCDC179H3BU77 68 aa4.08□□□□□ -1.76
COL4A3-205ENST00000471862 LCE3AQ5TA76 89 aa4.08□□□□□ -1.76
COL4A3-205ENST00000471862 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
COL4A3-205ENST00000471862 TNP1P09430 55 aa4.06□□□□□ -1.76
COL4A3-205ENST00000471862 TMEM258P61165 79 aa4.05□□□□□ -1.76
COL4A3-205ENST00000471862 PRR15LQ9BU68 103 aa4.02□□□□□ -1.77
COL4A3-205ENST00000471862 LINC01558Q9Y6Z2 57 aa4.02□□□□□ -1.77
COL4A3-205ENST00000471862 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
COL4A3-205ENST00000471862 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
COL4A3-205ENST00000471862 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
COL4A3-205ENST00000471862 MT4P47944 62 aa3.95□□□□□ -1.78
COL4A3-205ENST00000471862 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
COL4A3-205ENST00000471862 UQCR11O14957 56 aa3.91□□□□□ -1.78
COL4A3-205ENST00000471862 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
COL4A3-205ENST00000471862 RPS28P62857 69 aaKnown RBP3.91□□□□□ -1.78
COL4A3-205ENST00000471862 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.79
COL4A3-205ENST00000471862 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
COL4A3-205ENST00000471862 V9GYY9 64 aa3.83□□□□□ -1.8
COL4A3-205ENST00000471862 MIR22HGQ0VDD5 57 aa3.81□□□□□ -1.8
COL4A3-205ENST00000471862 KRTAP25-1Q3LHN0 102 aa3.81□□□□□ -1.8
COL4A3-205ENST00000471862 Q1T7F1 81 aa3.8□□□□□ -1.8
COL4A3-205ENST00000471862 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
COL4A3-205ENST00000471862 KRTAP5-10Q6L8G5 202 aa3.78□□□□□ -1.8
COL4A3-205ENST00000471862 KRTAP20-2Q3LI61 65 aa3.73□□□□□ -1.81
COL4A3-205ENST00000471862 K7ERS5 55 aa3.71□□□□□ -1.82
COL4A3-205ENST00000471862 SYNE1Q8NF91 8797 aaKnown RBP3.71□□□□□ -1.82
COL4A3-205ENST00000471862 SPRR5A0A1B0GTR4 108 aa3.7□□□□□ -1.82
COL4A3-205ENST00000471862 PSPHP1O15172 72 aa3.7□□□□□ -1.82
COL4A3-205ENST00000471862 KRTAP23-1A1A580 65 aa3.69□□□□□ -1.82
COL4A3-205ENST00000471862 KRTAP12-4P60329 112 aa3.65□□□□□ -1.83
COL4A3-205ENST00000471862 KRTAP15-1Q3LI76 137 aa3.65□□□□□ -1.83
COL4A3-205ENST00000471862 KRTAP5-7Q6L8G8 165 aa3.65□□□□□ -1.83
COL4A3-205ENST00000471862 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
COL4A3-205ENST00000471862 PRO0628Q9UI54 55 aa3.57□□□□□ -1.84
COL4A3-205ENST00000471862 A6NED7 52 aa3.55□□□□□ -1.84
COL4A3-205ENST00000471862 CDC42SE1Q9NRR8 79 aa3.53□□□□□ -1.84
COL4A3-205ENST00000471862 MT1AP04731 61 aa3.5□□□□□ -1.85
COL4A3-205ENST00000471862 BRK1Q8WUW1 75 aa3.49□□□□□ -1.85
COL4A3-205ENST00000471862 ROMO1P60602 79 aa3.48□□□□□ -1.85
COL4A3-205ENST00000471862 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
COL4A3-205ENST00000471862 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
COL4A3-205ENST00000471862 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
COL4A3-205ENST00000471862 PMAIP1Q13794 54 aa3.33□□□□□ -1.88
COL4A3-205ENST00000471862 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
COL4A3-205ENST00000471862 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
COL4A3-205ENST00000471862 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
COL4A3-205ENST00000471862 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
COL4A3-205ENST00000471862 PRAC1Q96KF2 57 aa3.23□□□□□ -1.89
COL4A3-205ENST00000471862 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.89
COL4A3-205ENST00000471862 AHNAKQ09666 5890 aaKnown RBP3.2□□□□□ -1.9
COL4A3-205ENST00000471862 MT3P25713 68 aa3.19□□□□□ -1.9
COL4A3-205ENST00000471862 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
COL4A3-205ENST00000471862 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
COL4A3-205ENST00000471862 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
COL4A3-205ENST00000471862 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
COL4A3-205ENST00000471862 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
COL4A3-205ENST00000471862 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
COL4A3-205ENST00000471862 NDUFAF8A1L188 74 aa2.77□□□□□ -1.97
COL4A3-205ENST00000471862 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
COL4A3-205ENST00000471862 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
COL4A3-205ENST00000471862 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
COL4A3-205ENST00000471862 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
COL4A3-205ENST00000471862 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
COL4A3-205ENST00000471862 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
COL4A3-205ENST00000471862 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
COL4A3-205ENST00000471862 INE1O15225 51 aa2.2□□□□□ -2.06
COL4A3-205ENST00000471862 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
COL4A3-205ENST00000471862 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
COL4A3-205ENST00000471862 PRM1P04553 51 aa1.78□□□□□ -2.12
COL4A3-205ENST00000471862 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
COL4A3-205ENST00000471862 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 58.3 ms