RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 KRTAP2-4Q9BYR9 128 aa5.32□□□□□ -1.56
LTA-215ENST00000471842 KRTAP10-7P60409 375 aaPredicted RBP5.3□□□□□ -1.56
LTA-215ENST00000471842 LCE1AQ5T7P2 110 aa5.27□□□□□ -1.57
LTA-215ENST00000471842 SPRR2DP22532 72 aa5.24□□□□□ -1.57
LTA-215ENST00000471842 KRTAP10-12P60413 245 aa5.21□□□□□ -1.58
LTA-215ENST00000471842 KRTAP13-4Q3LI77 160 aa5.17□□□□□ -1.58
LTA-215ENST00000471842 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
LTA-215ENST00000471842 KRTAP2-1Q9BYU5 128 aa5.14□□□□□ -1.59
LTA-215ENST00000471842 A0A0D9SG42 100 aa5.13□□□□□ -1.59
LTA-215ENST00000471842 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
LTA-215ENST00000471842 KRTAP12-1P59990 96 aa5.04□□□□□ -1.6
LTA-215ENST00000471842 PP632Q6XCG6 107 aa5.01□□□□□ -1.61
LTA-215ENST00000471842 INE1O15225 51 aa5□□□□□ -1.61
LTA-215ENST00000471842 KRTAP19-7Q3SYF9 63 aa4.91□□□□□ -1.62
LTA-215ENST00000471842 MT1EP04732 61 aa4.9□□□□□ -1.62
LTA-215ENST00000471842 KRTAP19-3Q7Z4W3 81 aa4.87□□□□□ -1.63
LTA-215ENST00000471842 LCE5AQ5TCM9 118 aa4.86□□□□□ -1.63
LTA-215ENST00000471842 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
LTA-215ENST00000471842 KRTAP19-5Q3LI72 72 aa4.83□□□□□ -1.64
LTA-215ENST00000471842 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
LTA-215ENST00000471842 KRTAP4-9Q9BYQ8 210 aa4.76□□□□□ -1.65
LTA-215ENST00000471842 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
LTA-215ENST00000471842 MT1GP13640 62 aa4.73□□□□□ -1.65
LTA-215ENST00000471842 TNP1P09430 55 aa4.71□□□□□ -1.66
LTA-215ENST00000471842 LCE3AQ5TA76 89 aa4.71□□□□□ -1.66
LTA-215ENST00000471842 KRTAP9-9Q9BYP9 154 aa4.7□□□□□ -1.66
LTA-215ENST00000471842 KRTAP9-4Q9BYQ2 154 aa4.7□□□□□ -1.66
LTA-215ENST00000471842 MT1MQ8N339 61 aa4.68□□□□□ -1.66
LTA-215ENST00000471842 MT1LQ93083 61 aa4.68□□□□□ -1.66
LTA-215ENST00000471842 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
LTA-215ENST00000471842 GPR98Q8WXG9 6306 aa4.62□□□□□ -1.67
LTA-215ENST00000471842 MT4P47944 62 aa4.61□□□□□ -1.67
LTA-215ENST00000471842 LCE1DQ5T752 114 aa4.61□□□□□ -1.67
LTA-215ENST00000471842 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
LTA-215ENST00000471842 LCE4AQ5TA78 99 aa4.56□□□□□ -1.68
LTA-215ENST00000471842 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
LTA-215ENST00000471842 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
LTA-215ENST00000471842 HMCN1Q96RW7 5635 aa4.5□□□□□ -1.69
LTA-215ENST00000471842 KRTAP5-4Q6L8H1 288 aa4.43□□□□□ -1.7
LTA-215ENST00000471842 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
LTA-215ENST00000471842 AHNAK2Q8IVF2 5795 aa4.33□□□□□ -1.72
LTA-215ENST00000471842 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
LTA-215ENST00000471842 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
LTA-215ENST00000471842 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
LTA-215ENST00000471842 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
LTA-215ENST00000471842 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
LTA-215ENST00000471842 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
LTA-215ENST00000471842 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
LTA-215ENST00000471842 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
LTA-215ENST00000471842 KRTAP5-7Q6L8G8 165 aa4.1□□□□□ -1.75
LTA-215ENST00000471842 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
LTA-215ENST00000471842 MT1AP04731 61 aa3.97□□□□□ -1.77
LTA-215ENST00000471842 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
LTA-215ENST00000471842 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
LTA-215ENST00000471842 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
LTA-215ENST00000471842 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
LTA-215ENST00000471842 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
LTA-215ENST00000471842 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
LTA-215ENST00000471842 MT3P25713 68 aa3.64□□□□□ -1.83
LTA-215ENST00000471842 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
LTA-215ENST00000471842 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
LTA-215ENST00000471842 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
LTA-215ENST00000471842 KRTAP5-1Q6L8H4 278 aa3.48□□□□□ -1.85
LTA-215ENST00000471842 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
LTA-215ENST00000471842 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
LTA-215ENST00000471842 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
LTA-215ENST00000471842 PRM1P04553 51 aa3.05□□□□□ -1.92
LTA-215ENST00000471842 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
LTA-215ENST00000471842 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
LTA-215ENST00000471842 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.93
LTA-215ENST00000471842 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
LTA-215ENST00000471842 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
LTA-215ENST00000471842 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
LTA-215ENST00000471842 PHGR1C9JFL3 82 aa2.55□□□□□ -2
LTA-215ENST00000471842 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
LTA-215ENST00000471842 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
LTA-215ENST00000471842 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
LTA-215ENST00000471842 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 58 ms