RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 ACYP2P14621 99 aa3.45□□□□□ -1.86
CPSF4-211ENST00000471455 KRTAP19-3Q7Z4W3 81 aa3.44□□□□□ -1.86
CPSF4-211ENST00000471455 CAMK2N1Q7Z7J9 78 aa3.44□□□□□ -1.86
CPSF4-211ENST00000471455 CHKB-CPT1BH3BT56 60 aa3.42□□□□□ -1.86
CPSF4-211ENST00000471455 MT1EP04732 61 aa3.41□□□□□ -1.86
CPSF4-211ENST00000471455 KRTAP19-7Q3SYF9 63 aa3.4□□□□□ -1.87
CPSF4-211ENST00000471455 SERP1Q9Y6X1 66 aa3.39□□□□□ -1.87
CPSF4-211ENST00000471455 H7BZZ5 65 aa3.38□□□□□ -1.87
CPSF4-211ENST00000471455 SNURFQ9Y675 71 aa3.38□□□□□ -1.87
CPSF4-211ENST00000471455 PP632Q6XCG6 107 aa3.37□□□□□ -1.87
CPSF4-211ENST00000471455 HMCN1Q96RW7 5635 aa3.36□□□□□ -1.87
CPSF4-211ENST00000471455 SMIM26A0A096LP01 95 aa3.34□□□□□ -1.87
CPSF4-211ENST00000471455 MT1GP13640 62 aa3.34□□□□□ -1.87
CPSF4-211ENST00000471455 ATP5EP56381 51 aaPredicted RBP3.33□□□□□ -1.88
CPSF4-211ENST00000471455 MT4P47944 62 aa3.32□□□□□ -1.88
CPSF4-211ENST00000471455 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
CPSF4-211ENST00000471455 A0A0D9SG42 100 aa3.29□□□□□ -1.88
CPSF4-211ENST00000471455 KRTAP13-4Q3LI77 160 aa3.29□□□□□ -1.88
CPSF4-211ENST00000471455 PRO0628Q9UI54 55 aa3.29□□□□□ -1.88
CPSF4-211ENST00000471455 KRTAP19-5Q3LI72 72 aa3.27□□□□□ -1.89
CPSF4-211ENST00000471455 MT1MQ8N339 61 aa3.26□□□□□ -1.89
CPSF4-211ENST00000471455 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
CPSF4-211ENST00000471455 KRTAP5-10Q6L8G5 202 aa3.25□□□□□ -1.89
CPSF4-211ENST00000471455 SEC61GP60059 68 aa3.24□□□□□ -1.89
CPSF4-211ENST00000471455 SPANXA2-OT1Q8N9U9 137 aa3.23□□□□□ -1.89
CPSF4-211ENST00000471455 BRK1Q8WUW1 75 aa3.23□□□□□ -1.89
CPSF4-211ENST00000471455 A8MU10 97 aa3.22□□□□□ -1.89
CPSF4-211ENST00000471455 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
CPSF4-211ENST00000471455 SPINT4Q6UDR6 99 aa3.21□□□□□ -1.9
CPSF4-211ENST00000471455 MT1LQ93083 61 aa3.21□□□□□ -1.9
CPSF4-211ENST00000471455 Q1T7F1 81 aa3.19□□□□□ -1.9
CPSF4-211ENST00000471455 KRTAP4-3Q9BYR4 195 aa3.19□□□□□ -1.9
CPSF4-211ENST00000471455 KRTAP5-7Q6L8G8 165 aa3.17□□□□□ -1.9
CPSF4-211ENST00000471455 PSPHP1O15172 72 aa3.15□□□□□ -1.91
CPSF4-211ENST00000471455 SPATA8Q6RVD6 105 aa3.15□□□□□ -1.91
CPSF4-211ENST00000471455 A0A1B0GU33 70 aa3.14□□□□□ -1.91
CPSF4-211ENST00000471455 V9GYY9 64 aa3.14□□□□□ -1.91
CPSF4-211ENST00000471455 KRTAP12-1P59990 96 aa3.13□□□□□ -1.91
CPSF4-211ENST00000471455 COA5Q86WW8 74 aa3.13□□□□□ -1.91
CPSF4-211ENST00000471455 C10orf95Q9H7T3 257 aa3.12□□□□□ -1.91
CPSF4-211ENST00000471455 TNP1P09430 55 aa3.11□□□□□ -1.91
CPSF4-211ENST00000471455 PMAIP1Q13794 54 aa3.1□□□□□ -1.91
CPSF4-211ENST00000471455 PRR15LQ9BU68 103 aa3.1□□□□□ -1.91
CPSF4-211ENST00000471455 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
CPSF4-211ENST00000471455 SPRR5A0A1B0GTR4 108 aa3.06□□□□□ -1.92
CPSF4-211ENST00000471455 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
CPSF4-211ENST00000471455 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
CPSF4-211ENST00000471455 KRTAP12-4P60329 112 aa3.04□□□□□ -1.92
CPSF4-211ENST00000471455 A6NED7 52 aa3.03□□□□□ -1.92
CPSF4-211ENST00000471455 CDC42SE1Q9NRR8 79 aa3.02□□□□□ -1.93
CPSF4-211ENST00000471455 A0A1B0GU69 56 aa3.01□□□□□ -1.93
CPSF4-211ENST00000471455 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
CPSF4-211ENST00000471455 KTN1-AS1Q86SY8 53 aa3.01□□□□□ -1.93
CPSF4-211ENST00000471455 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
CPSF4-211ENST00000471455 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
CPSF4-211ENST00000471455 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
CPSF4-211ENST00000471455 MIR22HGQ0VDD5 57 aa2.86□□□□□ -1.95
CPSF4-211ENST00000471455 UQCR11O14957 56 aa2.84□□□□□ -1.95
CPSF4-211ENST00000471455 KRTAP25-1Q3LHN0 102 aa2.83□□□□□ -1.96
CPSF4-211ENST00000471455 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
CPSF4-211ENST00000471455 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
CPSF4-211ENST00000471455 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
CPSF4-211ENST00000471455 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
CPSF4-211ENST00000471455 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
CPSF4-211ENST00000471455 MT1AP04731 61 aa2.75□□□□□ -1.97
CPSF4-211ENST00000471455 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
CPSF4-211ENST00000471455 K7ERS5 55 aa2.73□□□□□ -1.97
CPSF4-211ENST00000471455 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
CPSF4-211ENST00000471455 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
CPSF4-211ENST00000471455 ROMO1P60602 79 aa2.62□□□□□ -1.99
CPSF4-211ENST00000471455 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
CPSF4-211ENST00000471455 LUZP6Q538Z0 58 aa2.21□□□□□ -2.06
CPSF4-211ENST00000471455 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
CPSF4-211ENST00000471455 INE1O15225 51 aa1.96□□□□□ -2.1
CPSF4-211ENST00000471455 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
CPSF4-211ENST00000471455 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
CPSF4-211ENST00000471455 PRM1P04553 51 aa1.41□□□□□ -2.18
CPSF4-211ENST00000471455 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 119.9 ms