RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 SPRR2BP35325 72 aa6.52□□□□□ -1.37
HSPG2-208ENST00000471322 SPRR2AP35326 72 aa6.52□□□□□ -1.37
HSPG2-208ENST00000471322 KRTAP19-5Q3LI72 72 aa6.5□□□□□ -1.37
HSPG2-208ENST00000471322 LCE1AQ5T7P2 110 aa6.45□□□□□ -1.38
HSPG2-208ENST00000471322 KRTAP19-7Q3SYF9 63 aa6.38□□□□□ -1.39
HSPG2-208ENST00000471322 KRTAP20-1Q3LI63 56 aa6.36□□□□□ -1.39
HSPG2-208ENST00000471322 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
HSPG2-208ENST00000471322 KRTAP19-4Q3LI73 84 aa6.3□□□□□ -1.4
HSPG2-208ENST00000471322 SPRR2DP22532 72 aa6.29□□□□□ -1.4
HSPG2-208ENST00000471322 MT1EP04732 61 aa6.28□□□□□ -1.4
HSPG2-208ENST00000471322 LUZP6Q538Z0 58 aa6.26□□□□□ -1.41
HSPG2-208ENST00000471322 KRTAP2-3P0C7H8 128 aa6.24□□□□□ -1.41
HSPG2-208ENST00000471322 KRTAP2-4Q9BYR9 128 aa6.24□□□□□ -1.41
HSPG2-208ENST00000471322 LCE3CQ5T5A8 94 aa6.19□□□□□ -1.42
HSPG2-208ENST00000471322 MT1LQ93083 61 aa6.17□□□□□ -1.42
HSPG2-208ENST00000471322 KRTAP19-3Q7Z4W3 81 aa6.14□□□□□ -1.43
HSPG2-208ENST00000471322 LCE5AQ5TCM9 118 aa6.13□□□□□ -1.43
HSPG2-208ENST00000471322 DSTQ03001 7570 aaKnown RBP6.12□□□□□ -1.43
HSPG2-208ENST00000471322 NDUFAF8A1L188 74 aa6.12□□□□□ -1.43
HSPG2-208ENST00000471322 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
HSPG2-208ENST00000471322 KRTAP2-2Q9BYT5 123 aa6.06□□□□□ -1.44
HSPG2-208ENST00000471322 KRTAP2-1Q9BYU5 128 aa6.06□□□□□ -1.44
HSPG2-208ENST00000471322 MT1GP13640 62 aa6□□□□□ -1.45
HSPG2-208ENST00000471322 MT1MQ8N339 61 aa5.95□□□□□ -1.46
HSPG2-208ENST00000471322 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
HSPG2-208ENST00000471322 KRTAP4-3Q9BYR4 195 aa5.88□□□□□ -1.47
HSPG2-208ENST00000471322 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
HSPG2-208ENST00000471322 KRTAP4-9Q9BYQ8 210 aa5.67□□□□□ -1.5
HSPG2-208ENST00000471322 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
HSPG2-208ENST00000471322 H3BS24 57 aa5.56□□□□□ -1.52
HSPG2-208ENST00000471322 HMCN1Q96RW7 5635 aa5.53□□□□□ -1.52
HSPG2-208ENST00000471322 MT4P47944 62 aa5.53□□□□□ -1.52
HSPG2-208ENST00000471322 LCE1DQ5T752 114 aa5.52□□□□□ -1.53
HSPG2-208ENST00000471322 LCE4AQ5TA78 99 aa5.51□□□□□ -1.53
HSPG2-208ENST00000471322 A0A0A0MQY5 61 aa5.48□□□□□ -1.53
HSPG2-208ENST00000471322 KRTAP5-4Q6L8H1 288 aa5.47□□□□□ -1.53
HSPG2-208ENST00000471322 KRTAP5-5Q701N2 237 aaPredicted RBP5.41□□□□□ -1.54
HSPG2-208ENST00000471322 KRTAP4-6Q9BYQ5 205 aa5.39□□□□□ -1.55
HSPG2-208ENST00000471322 GPR98Q8WXG9 6306 aa5.38□□□□□ -1.55
HSPG2-208ENST00000471322 MT1AP04731 61 aa5.26□□□□□ -1.57
HSPG2-208ENST00000471322 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
HSPG2-208ENST00000471322 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
HSPG2-208ENST00000471322 AHNAK2Q8IVF2 5795 aa5.19□□□□□ -1.58
HSPG2-208ENST00000471322 KRTAP20-2Q3LI61 65 aa5.18□□□□□ -1.58
HSPG2-208ENST00000471322 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
HSPG2-208ENST00000471322 INE1O15225 51 aa5.12□□□□□ -1.59
HSPG2-208ENST00000471322 KRTAP5-3Q6L8H2 238 aa5.01□□□□□ -1.61
HSPG2-208ENST00000471322 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
HSPG2-208ENST00000471322 KRTAP5-10Q6L8G5 202 aa4.96□□□□□ -1.62
HSPG2-208ENST00000471322 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
HSPG2-208ENST00000471322 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.63
HSPG2-208ENST00000471322 MT3P25713 68 aa4.79□□□□□ -1.64
HSPG2-208ENST00000471322 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
HSPG2-208ENST00000471322 KRTAP5-7Q6L8G8 165 aa4.72□□□□□ -1.65
HSPG2-208ENST00000471322 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
HSPG2-208ENST00000471322 KRTAP4-11Q9BYQ6 195 aa4.67□□□□□ -1.66
HSPG2-208ENST00000471322 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
HSPG2-208ENST00000471322 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
HSPG2-208ENST00000471322 KRTAP5-1Q6L8H4 278 aa4.32□□□□□ -1.72
HSPG2-208ENST00000471322 MUC5ACP98088 5654 aa4.29□□□□□ -1.72
HSPG2-208ENST00000471322 MUC5BQ9HC84 5762 aaPredicted RBP4.28□□□□□ -1.72
HSPG2-208ENST00000471322 AHNAKQ09666 5890 aaKnown RBP4.21□□□□□ -1.73
HSPG2-208ENST00000471322 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.73
HSPG2-208ENST00000471322 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
HSPG2-208ENST00000471322 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.77
HSPG2-208ENST00000471322 PRM1P04553 51 aa4.01□□□□□ -1.77
HSPG2-208ENST00000471322 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
HSPG2-208ENST00000471322 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
HSPG2-208ENST00000471322 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
HSPG2-208ENST00000471322 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.84
HSPG2-208ENST00000471322 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
HSPG2-208ENST00000471322 KRTAP21-2Q3LI59 83 aa3.39□□□□□ -1.87
HSPG2-208ENST00000471322 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
HSPG2-208ENST00000471322 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
HSPG2-208ENST00000471322 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
HSPG2-208ENST00000471322 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
HSPG2-208ENST00000471322 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
HSPG2-208ENST00000471322 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 113.2 ms