RNA–Protein interactions for RNA: ENST00000471294.1

HDLBP-234, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-234ENST00000471294 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
HDLBP-234ENST00000471294 KRTAP19-3Q7Z4W3 81 aa4.33□□□□□ -1.72
HDLBP-234ENST00000471294 SPRR2EP22531 72 aa4.32□□□□□ -1.72
HDLBP-234ENST00000471294 SPRR2BP35325 72 aa4.32□□□□□ -1.72
HDLBP-234ENST00000471294 SPRR2AP35326 72 aa4.32□□□□□ -1.72
HDLBP-234ENST00000471294 MT1GP13640 62 aa4.31□□□□□ -1.72
HDLBP-234ENST00000471294 KRTAP20-1Q3LI63 56 aa4.31□□□□□ -1.72
HDLBP-234ENST00000471294 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
HDLBP-234ENST00000471294 MT1LQ93083 61 aa4.31□□□□□ -1.72
HDLBP-234ENST00000471294 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
HDLBP-234ENST00000471294 PRAC1Q96KF2 57 aa4.29□□□□□ -1.72
HDLBP-234ENST00000471294 MT1MQ8N339 61 aa4.19□□□□□ -1.74
HDLBP-234ENST00000471294 SPRR2DP22532 72 aa4.18□□□□□ -1.74
HDLBP-234ENST00000471294 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
HDLBP-234ENST00000471294 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
HDLBP-234ENST00000471294 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
HDLBP-234ENST00000471294 SVIPQ8NHG7 77 aa4.07□□□□□ -1.76
HDLBP-234ENST00000471294 LCE3BQ5TA77 95 aa4.04□□□□□ -1.76
HDLBP-234ENST00000471294 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
HDLBP-234ENST00000471294 KRTAP4-3Q9BYR4 195 aa3.99□□□□□ -1.77
HDLBP-234ENST00000471294 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
HDLBP-234ENST00000471294 KRTAP2-1Q9BYU5 128 aa3.99□□□□□ -1.77
HDLBP-234ENST00000471294 GPR98Q8WXG9 6306 aa3.98□□□□□ -1.77
HDLBP-234ENST00000471294 DSTQ03001 7570 aaKnown RBP3.97□□□□□ -1.77
HDLBP-234ENST00000471294 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
HDLBP-234ENST00000471294 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
HDLBP-234ENST00000471294 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
HDLBP-234ENST00000471294 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
HDLBP-234ENST00000471294 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
HDLBP-234ENST00000471294 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
HDLBP-234ENST00000471294 KRTAP4-9Q9BYQ8 210 aa3.71□□□□□ -1.82
HDLBP-234ENST00000471294 MT1AP04731 61 aa3.7□□□□□ -1.82
HDLBP-234ENST00000471294 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
HDLBP-234ENST00000471294 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.83
HDLBP-234ENST00000471294 HMCN1Q96RW7 5635 aa3.64□□□□□ -1.83
HDLBP-234ENST00000471294 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
HDLBP-234ENST00000471294 AHNAK2Q8IVF2 5795 aa3.61□□□□□ -1.83
HDLBP-234ENST00000471294 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
HDLBP-234ENST00000471294 LCE1DQ5T752 114 aa3.6□□□□□ -1.83
HDLBP-234ENST00000471294 MT4P47944 62 aa3.57□□□□□ -1.84
HDLBP-234ENST00000471294 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
HDLBP-234ENST00000471294 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
HDLBP-234ENST00000471294 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
HDLBP-234ENST00000471294 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
HDLBP-234ENST00000471294 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
HDLBP-234ENST00000471294 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
HDLBP-234ENST00000471294 MT3P25713 68 aa3.38□□□□□ -1.87
HDLBP-234ENST00000471294 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
HDLBP-234ENST00000471294 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
HDLBP-234ENST00000471294 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
HDLBP-234ENST00000471294 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
HDLBP-234ENST00000471294 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
HDLBP-234ENST00000471294 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
HDLBP-234ENST00000471294 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
HDLBP-234ENST00000471294 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
HDLBP-234ENST00000471294 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
HDLBP-234ENST00000471294 KRTAP5-8O75690 187 aa3□□□□□ -1.93
HDLBP-234ENST00000471294 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
HDLBP-234ENST00000471294 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
HDLBP-234ENST00000471294 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
HDLBP-234ENST00000471294 A0A0A0MQY5 61 aa2.92□□□□□ -1.94
HDLBP-234ENST00000471294 INE1O15225 51 aa2.84□□□□□ -1.95
HDLBP-234ENST00000471294 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
HDLBP-234ENST00000471294 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
HDLBP-234ENST00000471294 KRTAP9-9Q9BYP9 154 aa2.77□□□□□ -1.97
HDLBP-234ENST00000471294 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
HDLBP-234ENST00000471294 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
HDLBP-234ENST00000471294 H3BS24 57 aa2.62□□□□□ -1.99
HDLBP-234ENST00000471294 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
HDLBP-234ENST00000471294 PRM1P04553 51 aa2.42□□□□□ -2.02
HDLBP-234ENST00000471294 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
HDLBP-234ENST00000471294 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
HDLBP-234ENST00000471294 KRTAP4-12Q9BQ66 201 aa2.28□□□□□ -2.04
HDLBP-234ENST00000471294 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
HDLBP-234ENST00000471294 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
HDLBP-234ENST00000471294 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
HDLBP-234ENST00000471294 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
HDLBP-234ENST00000471294 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 81.2 ms