RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
FN1-217ENST00000471193 SPRR2EP22531 72 aa4.2□□□□□ -1.74
FN1-217ENST00000471193 SPRR2BP35325 72 aa4.2□□□□□ -1.74
FN1-217ENST00000471193 SPRR2AP35326 72 aa4.2□□□□□ -1.74
FN1-217ENST00000471193 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
FN1-217ENST00000471193 KRTAP19-3Q7Z4W3 81 aa4.16□□□□□ -1.74
FN1-217ENST00000471193 MT1LQ93083 61 aa4.16□□□□□ -1.74
FN1-217ENST00000471193 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
FN1-217ENST00000471193 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
FN1-217ENST00000471193 MT1GP13640 62 aa4.09□□□□□ -1.75
FN1-217ENST00000471193 SPRR2DP22532 72 aa4.05□□□□□ -1.76
FN1-217ENST00000471193 MT1MQ8N339 61 aa4.05□□□□□ -1.76
FN1-217ENST00000471193 KRTAP2-3P0C7H8 128 aa4.03□□□□□ -1.76
FN1-217ENST00000471193 KRTAP19-4Q3LI73 84 aa4.03□□□□□ -1.76
FN1-217ENST00000471193 KRTAP2-4Q9BYR9 128 aa4.03□□□□□ -1.76
FN1-217ENST00000471193 KRTAP4-7Q9BYR0 210 aa3.97□□□□□ -1.77
FN1-217ENST00000471193 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
FN1-217ENST00000471193 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
FN1-217ENST00000471193 LOC100996750A0A140TA64 210 aa3.93□□□□□ -1.78
FN1-217ENST00000471193 KRTAP4-6Q9BYQ5 205 aa3.93□□□□□ -1.78
FN1-217ENST00000471193 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
FN1-217ENST00000471193 LCE3BQ5TA77 95 aa3.9□□□□□ -1.79
FN1-217ENST00000471193 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
FN1-217ENST00000471193 KRTAP2-1Q9BYU5 128 aa3.89□□□□□ -1.79
FN1-217ENST00000471193 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.79
FN1-217ENST00000471193 GPR98Q8WXG9 6306 aa3.79□□□□□ -1.8
FN1-217ENST00000471193 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
FN1-217ENST00000471193 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
FN1-217ENST00000471193 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
FN1-217ENST00000471193 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
FN1-217ENST00000471193 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
FN1-217ENST00000471193 MT1AP04731 61 aa3.55□□□□□ -1.84
FN1-217ENST00000471193 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
FN1-217ENST00000471193 MT4P47944 62 aa3.5□□□□□ -1.85
FN1-217ENST00000471193 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
FN1-217ENST00000471193 LCE1DQ5T752 114 aa3.5□□□□□ -1.85
FN1-217ENST00000471193 SYNE1Q8NF91 8797 aaKnown RBP3.46□□□□□ -1.85
FN1-217ENST00000471193 HMCN1Q96RW7 5635 aa3.46□□□□□ -1.85
FN1-217ENST00000471193 KRTAP12-4P60329 112 aa3.45□□□□□ -1.86
FN1-217ENST00000471193 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
FN1-217ENST00000471193 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
FN1-217ENST00000471193 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.87
FN1-217ENST00000471193 KRTAP9-4Q9BYQ2 154 aa3.37□□□□□ -1.87
FN1-217ENST00000471193 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
FN1-217ENST00000471193 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
FN1-217ENST00000471193 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
FN1-217ENST00000471193 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
FN1-217ENST00000471193 MT3P25713 68 aa3.21□□□□□ -1.9
FN1-217ENST00000471193 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
FN1-217ENST00000471193 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
FN1-217ENST00000471193 KRTAP9-9Q9BYP9 154 aa3.17□□□□□ -1.9
FN1-217ENST00000471193 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
FN1-217ENST00000471193 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
FN1-217ENST00000471193 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
FN1-217ENST00000471193 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
FN1-217ENST00000471193 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
FN1-217ENST00000471193 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
FN1-217ENST00000471193 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
FN1-217ENST00000471193 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
FN1-217ENST00000471193 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
FN1-217ENST00000471193 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
FN1-217ENST00000471193 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
FN1-217ENST00000471193 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
FN1-217ENST00000471193 H3BS24 57 aa2.8□□□□□ -1.96
FN1-217ENST00000471193 A0A0A0MQY5 61 aa2.73□□□□□ -1.97
FN1-217ENST00000471193 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
FN1-217ENST00000471193 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
FN1-217ENST00000471193 INE1O15225 51 aa2.64□□□□□ -1.99
FN1-217ENST00000471193 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
FN1-217ENST00000471193 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
FN1-217ENST00000471193 PRM1P04553 51 aa2.36□□□□□ -2.03
FN1-217ENST00000471193 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
FN1-217ENST00000471193 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
FN1-217ENST00000471193 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
FN1-217ENST00000471193 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
FN1-217ENST00000471193 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
FN1-217ENST00000471193 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
FN1-217ENST00000471193 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 10.2 ms