RNA–Protein interactions for RNA: ENST00000471161.1

TMEM139-206, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 1,724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-206ENST00000471161 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
TMEM139-206ENST00000471161 KRTAP19-6Q3LI70 58 aa5.19□□□□□ -1.58
TMEM139-206ENST00000471161 SYNE2Q8WXH0 6885 aaKnown RBP5.16□□□□□ -1.58
TMEM139-206ENST00000471161 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.58
TMEM139-206ENST00000471161 LCE3AQ5TA76 89 aa5.15□□□□□ -1.58
TMEM139-206ENST00000471161 PP632Q6XCG6 107 aa5.15□□□□□ -1.58
TMEM139-206ENST00000471161 MACF1Q9UPN3 7388 aaKnown RBP5.13□□□□□ -1.59
TMEM139-206ENST00000471161 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
TMEM139-206ENST00000471161 KRTAP5-3Q6L8H2 238 aa5.09□□□□□ -1.6
TMEM139-206ENST00000471161 KRTAP8-1Q8IUC2 63 aa5.01□□□□□ -1.61
TMEM139-206ENST00000471161 KMT2DO14686 5537 aa5□□□□□ -1.61
TMEM139-206ENST00000471161 KRTAP12-3P60328 96 aa4.92□□□□□ -1.62
TMEM139-206ENST00000471161 KRTAP19-5Q3LI72 72 aa4.91□□□□□ -1.62
TMEM139-206ENST00000471161 KRTAP6-3Q3LI67 103 aa4.9□□□□□ -1.62
TMEM139-206ENST00000471161 KRTAP19-7Q3SYF9 63 aa4.84□□□□□ -1.63
TMEM139-206ENST00000471161 NEBP20929 6669 aa4.8□□□□□ -1.64
TMEM139-206ENST00000471161 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
TMEM139-206ENST00000471161 MT1EP04732 61 aa4.75□□□□□ -1.65
TMEM139-206ENST00000471161 KRTAP20-1Q3LI63 56 aa4.66□□□□□ -1.66
TMEM139-206ENST00000471161 MT1LQ93083 61 aa4.66□□□□□ -1.66
TMEM139-206ENST00000471161 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
TMEM139-206ENST00000471161 MDN1Q9NU22 5596 aa4.63□□□□□ -1.67
TMEM139-206ENST00000471161 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
TMEM139-206ENST00000471161 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
TMEM139-206ENST00000471161 KRTAP5-9P26371 169 aa4.58□□□□□ -1.68
TMEM139-206ENST00000471161 KRTAP19-3Q7Z4W3 81 aa4.54□□□□□ -1.68
TMEM139-206ENST00000471161 INE1O15225 51 aa4.5□□□□□ -1.69
TMEM139-206ENST00000471161 MT1GP13640 62 aa4.48□□□□□ -1.69
TMEM139-206ENST00000471161 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
TMEM139-206ENST00000471161 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
TMEM139-206ENST00000471161 MT1MQ8N339 61 aa4.46□□□□□ -1.69
TMEM139-206ENST00000471161 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
TMEM139-206ENST00000471161 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
TMEM139-206ENST00000471161 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
TMEM139-206ENST00000471161 SPRR2EP22531 72 aa4.38□□□□□ -1.71
TMEM139-206ENST00000471161 SPRR2BP35325 72 aa4.38□□□□□ -1.71
TMEM139-206ENST00000471161 SPRR2AP35326 72 aa4.38□□□□□ -1.71
TMEM139-206ENST00000471161 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
TMEM139-206ENST00000471161 KRTAP2-1Q9BYU5 128 aa4.32□□□□□ -1.72
TMEM139-206ENST00000471161 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
TMEM139-206ENST00000471161 SPRR2DP22532 72 aa4.22□□□□□ -1.73
TMEM139-206ENST00000471161 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
TMEM139-206ENST00000471161 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
TMEM139-206ENST00000471161 MT1AP04731 61 aa3.94□□□□□ -1.78
TMEM139-206ENST00000471161 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
TMEM139-206ENST00000471161 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
TMEM139-206ENST00000471161 KRTAP5-4Q6L8H1 288 aa3.81□□□□□ -1.8
TMEM139-206ENST00000471161 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
TMEM139-206ENST00000471161 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
TMEM139-206ENST00000471161 MT4P47944 62 aa3.72□□□□□ -1.81
TMEM139-206ENST00000471161 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
TMEM139-206ENST00000471161 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
TMEM139-206ENST00000471161 KRTAP5-10Q6L8G5 202 aa3.67□□□□□ -1.82
TMEM139-206ENST00000471161 AHNAK2Q8IVF2 5795 aa3.66□□□□□ -1.82
TMEM139-206ENST00000471161 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
TMEM139-206ENST00000471161 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
TMEM139-206ENST00000471161 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
TMEM139-206ENST00000471161 MT3P25713 68 aa3.55□□□□□ -1.84
TMEM139-206ENST00000471161 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
TMEM139-206ENST00000471161 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
TMEM139-206ENST00000471161 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
TMEM139-206ENST00000471161 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
TMEM139-206ENST00000471161 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
TMEM139-206ENST00000471161 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
TMEM139-206ENST00000471161 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
TMEM139-206ENST00000471161 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
TMEM139-206ENST00000471161 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
TMEM139-206ENST00000471161 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
TMEM139-206ENST00000471161 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
TMEM139-206ENST00000471161 PRM1P04553 51 aa2.96□□□□□ -1.93
TMEM139-206ENST00000471161 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
TMEM139-206ENST00000471161 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
TMEM139-206ENST00000471161 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
TMEM139-206ENST00000471161 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
TMEM139-206ENST00000471161 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
TMEM139-206ENST00000471161 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
TMEM139-206ENST00000471161 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
TMEM139-206ENST00000471161 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 117.5 ms