RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 LOC100996750A0A140TA64 210 aa4.65□□□□□ -1.67
SCNM1-205ENST00000471039 KRTAP4-6Q9BYQ5 205 aa4.65□□□□□ -1.67
SCNM1-205ENST00000471039 TNP1P09430 55 aa4.64□□□□□ -1.67
SCNM1-205ENST00000471039 SPRR2DP22532 72 aa4.62□□□□□ -1.67
SCNM1-205ENST00000471039 MT1EP04732 61 aa4.61□□□□□ -1.67
SCNM1-205ENST00000471039 PP632Q6XCG6 107 aa4.61□□□□□ -1.67
SCNM1-205ENST00000471039 KRTAP23-1A1A580 65 aa4.59□□□□□ -1.67
SCNM1-205ENST00000471039 LCE3AQ5TA76 89 aa4.59□□□□□ -1.67
SCNM1-205ENST00000471039 KRTAP19-5Q3LI72 72 aa4.58□□□□□ -1.68
SCNM1-205ENST00000471039 KRTAP2-3P0C7H8 128 aa4.57□□□□□ -1.68
SCNM1-205ENST00000471039 KRTAP2-4Q9BYR9 128 aa4.57□□□□□ -1.68
SCNM1-205ENST00000471039 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
SCNM1-205ENST00000471039 LCE5AQ5TCM9 118 aa4.51□□□□□ -1.69
SCNM1-205ENST00000471039 LCE3BQ5TA77 95 aa4.47□□□□□ -1.69
SCNM1-205ENST00000471039 MT1LQ93083 61 aa4.44□□□□□ -1.7
SCNM1-205ENST00000471039 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
SCNM1-205ENST00000471039 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
SCNM1-205ENST00000471039 MT1GP13640 62 aa4.42□□□□□ -1.7
SCNM1-205ENST00000471039 DSTQ03001 7570 aaKnown RBP4.39□□□□□ -1.71
SCNM1-205ENST00000471039 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
SCNM1-205ENST00000471039 MT1MQ8N339 61 aa4.38□□□□□ -1.71
SCNM1-205ENST00000471039 GPR98Q8WXG9 6306 aa4.26□□□□□ -1.73
SCNM1-205ENST00000471039 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
SCNM1-205ENST00000471039 KRTAP15-1Q3LI76 137 aa4.24□□□□□ -1.73
SCNM1-205ENST00000471039 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
SCNM1-205ENST00000471039 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
SCNM1-205ENST00000471039 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
SCNM1-205ENST00000471039 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
SCNM1-205ENST00000471039 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
SCNM1-205ENST00000471039 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
SCNM1-205ENST00000471039 LCE4AQ5TA78 99 aa4.08□□□□□ -1.76
SCNM1-205ENST00000471039 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
SCNM1-205ENST00000471039 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
SCNM1-205ENST00000471039 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
SCNM1-205ENST00000471039 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
SCNM1-205ENST00000471039 MT4P47944 62 aa4.01□□□□□ -1.77
SCNM1-205ENST00000471039 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
SCNM1-205ENST00000471039 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
SCNM1-205ENST00000471039 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
SCNM1-205ENST00000471039 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
SCNM1-205ENST00000471039 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
SCNM1-205ENST00000471039 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
SCNM1-205ENST00000471039 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
SCNM1-205ENST00000471039 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
SCNM1-205ENST00000471039 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
SCNM1-205ENST00000471039 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
SCNM1-205ENST00000471039 MT1AP04731 61 aa3.78□□□□□ -1.8
SCNM1-205ENST00000471039 AHNAK2Q8IVF2 5795 aa3.78□□□□□ -1.81
SCNM1-205ENST00000471039 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
SCNM1-205ENST00000471039 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
SCNM1-205ENST00000471039 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
SCNM1-205ENST00000471039 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
SCNM1-205ENST00000471039 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
SCNM1-205ENST00000471039 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
SCNM1-205ENST00000471039 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
SCNM1-205ENST00000471039 MT3P25713 68 aa3.42□□□□□ -1.86
SCNM1-205ENST00000471039 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
SCNM1-205ENST00000471039 INE1O15225 51 aa3.34□□□□□ -1.87
SCNM1-205ENST00000471039 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
SCNM1-205ENST00000471039 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
SCNM1-205ENST00000471039 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
SCNM1-205ENST00000471039 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
SCNM1-205ENST00000471039 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
SCNM1-205ENST00000471039 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
SCNM1-205ENST00000471039 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
SCNM1-205ENST00000471039 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
SCNM1-205ENST00000471039 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
SCNM1-205ENST00000471039 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
SCNM1-205ENST00000471039 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
SCNM1-205ENST00000471039 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
SCNM1-205ENST00000471039 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
SCNM1-205ENST00000471039 PRM1P04553 51 aa2.57□□□□□ -2
SCNM1-205ENST00000471039 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
SCNM1-205ENST00000471039 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
SCNM1-205ENST00000471039 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
SCNM1-205ENST00000471039 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
SCNM1-205ENST00000471039 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
SCNM1-205ENST00000471039 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 82.7 ms