RNA–Protein interactions for RNA: ENST00000470724.5

NXF3-205, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-205ENST00000470724 SPRR2AP35326 72 aa3.77□□□□□ -1.81
NXF3-205ENST00000470724 TNP1P09430 55 aa3.68□□□□□ -1.82
NXF3-205ENST00000470724 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
NXF3-205ENST00000470724 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
NXF3-205ENST00000470724 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
NXF3-205ENST00000470724 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
NXF3-205ENST00000470724 SPRR2DP22532 72 aa3.65□□□□□ -1.83
NXF3-205ENST00000470724 KRTAP15-1Q3LI76 137 aa3.65□□□□□ -1.83
NXF3-205ENST00000470724 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.83
NXF3-205ENST00000470724 LCE3AQ5TA76 89 aa3.59□□□□□ -1.83
NXF3-205ENST00000470724 MT1EP04732 61 aa3.57□□□□□ -1.84
NXF3-205ENST00000470724 KRTAP19-7Q3SYF9 63 aa3.57□□□□□ -1.84
NXF3-205ENST00000470724 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
NXF3-205ENST00000470724 KRTAP2-1Q9BYU5 128 aa3.55□□□□□ -1.84
NXF3-205ENST00000470724 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
NXF3-205ENST00000470724 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
NXF3-205ENST00000470724 LOC100996750A0A140TA64 210 aa3.48□□□□□ -1.85
NXF3-205ENST00000470724 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
NXF3-205ENST00000470724 LCE5AQ5TCM9 118 aa3.46□□□□□ -1.86
NXF3-205ENST00000470724 PP632Q6XCG6 107 aa3.46□□□□□ -1.86
NXF3-205ENST00000470724 KRTAP12-3P60328 96 aa3.45□□□□□ -1.86
NXF3-205ENST00000470724 MT1GP13640 62 aa3.44□□□□□ -1.86
NXF3-205ENST00000470724 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
NXF3-205ENST00000470724 MT1LQ93083 61 aa3.43□□□□□ -1.86
NXF3-205ENST00000470724 MT1MQ8N339 61 aa3.39□□□□□ -1.87
NXF3-205ENST00000470724 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
NXF3-205ENST00000470724 KRTAP4-3Q9BYR4 195 aa3.33□□□□□ -1.88
NXF3-205ENST00000470724 INE1O15225 51 aa3.31□□□□□ -1.88
NXF3-205ENST00000470724 KRTAP4-7Q9BYR0 210 aa3.3□□□□□ -1.88
NXF3-205ENST00000470724 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
NXF3-205ENST00000470724 KRTAP4-9Q9BYQ8 210 aa3.25□□□□□ -1.89
NXF3-205ENST00000470724 MT4P47944 62 aa3.2□□□□□ -1.9
NXF3-205ENST00000470724 LCE4AQ5TA78 99 aa3.18□□□□□ -1.9
NXF3-205ENST00000470724 LCE3CQ5T5A8 94 aa3.17□□□□□ -1.9
NXF3-205ENST00000470724 LCE1DQ5T752 114 aa3.15□□□□□ -1.91
NXF3-205ENST00000470724 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
NXF3-205ENST00000470724 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
NXF3-205ENST00000470724 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
NXF3-205ENST00000470724 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
NXF3-205ENST00000470724 KRTAP9-4Q9BYQ2 154 aa3.02□□□□□ -1.93
NXF3-205ENST00000470724 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
NXF3-205ENST00000470724 SYNE1Q8NF91 8797 aaKnown RBP2.98□□□□□ -1.93
NXF3-205ENST00000470724 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
NXF3-205ENST00000470724 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
NXF3-205ENST00000470724 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
NXF3-205ENST00000470724 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
NXF3-205ENST00000470724 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
NXF3-205ENST00000470724 MT1AP04731 61 aa2.92□□□□□ -1.94
NXF3-205ENST00000470724 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.95
NXF3-205ENST00000470724 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
NXF3-205ENST00000470724 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
NXF3-205ENST00000470724 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
NXF3-205ENST00000470724 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
NXF3-205ENST00000470724 MT3P25713 68 aa2.78□□□□□ -1.96
NXF3-205ENST00000470724 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
NXF3-205ENST00000470724 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
NXF3-205ENST00000470724 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
NXF3-205ENST00000470724 KRTAP4-11Q9BYQ6 195 aa2.66□□□□□ -1.98
NXF3-205ENST00000470724 AHNAKQ09666 5890 aaKnown RBP2.59□□□□□ -1.99
NXF3-205ENST00000470724 OBSCNQ5VST9 7968 aa2.58□□□□□ -2
NXF3-205ENST00000470724 KRTAP5-8O75690 187 aa2.55□□□□□ -2
NXF3-205ENST00000470724 MUC5ACP98088 5654 aa2.54□□□□□ -2
NXF3-205ENST00000470724 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
NXF3-205ENST00000470724 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
NXF3-205ENST00000470724 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
NXF3-205ENST00000470724 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
NXF3-205ENST00000470724 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
NXF3-205ENST00000470724 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
NXF3-205ENST00000470724 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
NXF3-205ENST00000470724 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
NXF3-205ENST00000470724 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
NXF3-205ENST00000470724 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
NXF3-205ENST00000470724 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
NXF3-205ENST00000470724 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
NXF3-205ENST00000470724 PRM1P04553 51 aa1.77□□□□□ -2.13
NXF3-205ENST00000470724 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
NXF3-205ENST00000470724 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
NXF3-205ENST00000470724 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 38.2 ms