RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 KRTAP15-1Q3LI76 137 aa3.43□□□□□ -1.86
HDLBP-233ENST00000470710 KRTAP23-1A1A580 65 aa3.4□□□□□ -1.87
HDLBP-233ENST00000470710 PP632Q6XCG6 107 aa3.37□□□□□ -1.87
HDLBP-233ENST00000470710 LCE3AQ5TA76 89 aa3.36□□□□□ -1.87
HDLBP-233ENST00000470710 KMT2DO14686 5537 aa3.31□□□□□ -1.88
HDLBP-233ENST00000470710 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
HDLBP-233ENST00000470710 MACF1Q9UPN3 7388 aaKnown RBP3.26□□□□□ -1.89
HDLBP-233ENST00000470710 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
HDLBP-233ENST00000470710 KRTAP19-7Q3SYF9 63 aa3.24□□□□□ -1.89
HDLBP-233ENST00000470710 KRTAP12-3P60328 96 aa3.23□□□□□ -1.89
HDLBP-233ENST00000470710 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
HDLBP-233ENST00000470710 MT1EP04732 61 aa3.2□□□□□ -1.9
HDLBP-233ENST00000470710 KRTAP6-3Q3LI67 103 aa3.2□□□□□ -1.9
HDLBP-233ENST00000470710 SPRR2FQ96RM1 72 aa3.18□□□□□ -1.9
HDLBP-233ENST00000470710 MUC12Q9UKN1 5478 aa3.14□□□□□ -1.91
HDLBP-233ENST00000470710 SYNE2Q8WXH0 6885 aaKnown RBP3.12□□□□□ -1.91
HDLBP-233ENST00000470710 MT1LQ93083 61 aa3.12□□□□□ -1.91
HDLBP-233ENST00000470710 KRTAP19-3Q7Z4W3 81 aa3.09□□□□□ -1.91
HDLBP-233ENST00000470710 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
HDLBP-233ENST00000470710 LCE1AQ5T7P2 110 aa3.07□□□□□ -1.92
HDLBP-233ENST00000470710 MT1GP13640 62 aa3.06□□□□□ -1.92
HDLBP-233ENST00000470710 SPRR2EP22531 72 aa3.04□□□□□ -1.92
HDLBP-233ENST00000470710 SPRR2BP35325 72 aa3.04□□□□□ -1.92
HDLBP-233ENST00000470710 SPRR2AP35326 72 aa3.04□□□□□ -1.92
HDLBP-233ENST00000470710 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
HDLBP-233ENST00000470710 MT1MQ8N339 61 aa3.01□□□□□ -1.93
HDLBP-233ENST00000470710 NEBP20929 6669 aa2.96□□□□□ -1.93
HDLBP-233ENST00000470710 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
HDLBP-233ENST00000470710 SPRR2DP22532 72 aa2.94□□□□□ -1.94
HDLBP-233ENST00000470710 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
HDLBP-233ENST00000470710 KRTAP2-2Q9BYT5 123 aa2.85□□□□□ -1.95
HDLBP-233ENST00000470710 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
HDLBP-233ENST00000470710 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
HDLBP-233ENST00000470710 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
HDLBP-233ENST00000470710 LUZP6Q538Z0 58 aa2.82□□□□□ -1.96
HDLBP-233ENST00000470710 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
HDLBP-233ENST00000470710 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
HDLBP-233ENST00000470710 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
HDLBP-233ENST00000470710 DSTQ03001 7570 aaKnown RBP2.78□□□□□ -1.96
HDLBP-233ENST00000470710 KRTAP20-1Q3LI63 56 aa2.77□□□□□ -1.97
HDLBP-233ENST00000470710 KRTAP2-1Q9BYU5 128 aa2.74□□□□□ -1.97
HDLBP-233ENST00000470710 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
HDLBP-233ENST00000470710 LCE1EQ5T753 118 aa2.67□□□□□ -1.98
HDLBP-233ENST00000470710 MT1AP04731 61 aa2.66□□□□□ -1.98
HDLBP-233ENST00000470710 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
HDLBP-233ENST00000470710 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
HDLBP-233ENST00000470710 KRTAP12-4P60329 112 aa2.56□□□□□ -2
HDLBP-233ENST00000470710 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2
HDLBP-233ENST00000470710 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
HDLBP-233ENST00000470710 A0A0A0MQY5 61 aa2.53□□□□□ -2
HDLBP-233ENST00000470710 MT3P25713 68 aa2.53□□□□□ -2
HDLBP-233ENST00000470710 MT4P47944 62 aa2.53□□□□□ -2
HDLBP-233ENST00000470710 KRTAP20-2Q3LI61 65 aa2.48□□□□□ -2.01
HDLBP-233ENST00000470710 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
HDLBP-233ENST00000470710 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
HDLBP-233ENST00000470710 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
HDLBP-233ENST00000470710 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
HDLBP-233ENST00000470710 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
HDLBP-233ENST00000470710 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
HDLBP-233ENST00000470710 INE1O15225 51 aa2.34□□□□□ -2.03
HDLBP-233ENST00000470710 AHNAK2Q8IVF2 5795 aa2.32□□□□□ -2.04
HDLBP-233ENST00000470710 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
HDLBP-233ENST00000470710 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
HDLBP-233ENST00000470710 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
HDLBP-233ENST00000470710 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
HDLBP-233ENST00000470710 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
HDLBP-233ENST00000470710 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
HDLBP-233ENST00000470710 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
HDLBP-233ENST00000470710 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
HDLBP-233ENST00000470710 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
HDLBP-233ENST00000470710 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
HDLBP-233ENST00000470710 PRM1P04553 51 aa1.84□□□□□ -2.11
HDLBP-233ENST00000470710 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
HDLBP-233ENST00000470710 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
HDLBP-233ENST00000470710 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
HDLBP-233ENST00000470710 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
HDLBP-233ENST00000470710 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
HDLBP-233ENST00000470710 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms