RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-233	ENST00000470710	KRTAP15-1	Q3LI76	137 aa		3.43	□□□□□ -1.86
HDLBP-233	ENST00000470710	KRTAP23-1	A1A580	65 aa		3.4	□□□□□ -1.87
HDLBP-233	ENST00000470710	PP632	Q6XCG6	107 aa		3.37	□□□□□ -1.87
HDLBP-233	ENST00000470710	LCE3A	Q5TA76	89 aa		3.36	□□□□□ -1.87
HDLBP-233	ENST00000470710	KMT2D	O14686	5537 aa		3.31	□□□□□ -1.88
HDLBP-233	ENST00000470710	KRTAP8-1	Q8IUC2	63 aa		3.31	□□□□□ -1.88
HDLBP-233	ENST00000470710	MACF1	Q9UPN3	7388 aa	Known RBP	3.26	□□□□□ -1.89
HDLBP-233	ENST00000470710	KRTAP19-5	Q3LI72	72 aa		3.25	□□□□□ -1.89
HDLBP-233	ENST00000470710	KRTAP19-7	Q3SYF9	63 aa		3.24	□□□□□ -1.89
HDLBP-233	ENST00000470710	KRTAP12-3	P60328	96 aa		3.23	□□□□□ -1.89
HDLBP-233	ENST00000470710	KRTAP5-9	P26371	169 aa		3.21	□□□□□ -1.9
HDLBP-233	ENST00000470710	MT1E	P04732	61 aa		3.2	□□□□□ -1.9
HDLBP-233	ENST00000470710	KRTAP6-3	Q3LI67	103 aa		3.2	□□□□□ -1.9
HDLBP-233	ENST00000470710	SPRR2F	Q96RM1	72 aa		3.18	□□□□□ -1.9
HDLBP-233	ENST00000470710	MUC12	Q9UKN1	5478 aa		3.14	□□□□□ -1.91
HDLBP-233	ENST00000470710	SYNE2	Q8WXH0	6885 aa	Known RBP	3.12	□□□□□ -1.91
HDLBP-233	ENST00000470710	MT1L	Q93083	61 aa		3.12	□□□□□ -1.91
HDLBP-233	ENST00000470710	KRTAP19-3	Q7Z4W3	81 aa		3.09	□□□□□ -1.91
HDLBP-233	ENST00000470710	MDN1	Q9NU22	5596 aa		3.08	□□□□□ -1.92
HDLBP-233	ENST00000470710	LCE1A	Q5T7P2	110 aa		3.07	□□□□□ -1.92
HDLBP-233	ENST00000470710	MT1G	P13640	62 aa		3.06	□□□□□ -1.92
HDLBP-233	ENST00000470710	SPRR2E	P22531	72 aa		3.04	□□□□□ -1.92
HDLBP-233	ENST00000470710	SPRR2B	P35325	72 aa		3.04	□□□□□ -1.92
HDLBP-233	ENST00000470710	SPRR2A	P35326	72 aa		3.04	□□□□□ -1.92
HDLBP-233	ENST00000470710	LCE3C	Q5T5A8	94 aa		3.02	□□□□□ -1.93
HDLBP-233	ENST00000470710	MT1M	Q8N339	61 aa		3.01	□□□□□ -1.93
HDLBP-233	ENST00000470710	NEB	P20929	6669 aa		2.96	□□□□□ -1.93
HDLBP-233	ENST00000470710	SPRR5	A0A1B0GTR4	108 aa		2.94	□□□□□ -1.94
HDLBP-233	ENST00000470710	SPRR2D	P22532	72 aa		2.94	□□□□□ -1.94
HDLBP-233	ENST00000470710	KRTAP4-3	Q9BYR4	195 aa		2.91	□□□□□ -1.94
HDLBP-233	ENST00000470710	KRTAP2-2	Q9BYT5	123 aa		2.85	□□□□□ -1.95
HDLBP-233	ENST00000470710	KRTAP9-6	A8MVA2	160 aa		2.84	□□□□□ -1.95
HDLBP-233	ENST00000470710	KRTAP5-11	Q6L8G4	156 aa		2.83	□□□□□ -1.96
HDLBP-233	ENST00000470710	NDUFAF8	A1L188	74 aa		2.82	□□□□□ -1.96
HDLBP-233	ENST00000470710	LUZP6	Q538Z0	58 aa		2.82	□□□□□ -1.96
HDLBP-233	ENST00000470710	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.82	□□□□□ -1.96
HDLBP-233	ENST00000470710	KRTAP2-3	P0C7H8	128 aa		2.8	□□□□□ -1.96
HDLBP-233	ENST00000470710	KRTAP2-4	Q9BYR9	128 aa		2.8	□□□□□ -1.96
HDLBP-233	ENST00000470710	DST	Q03001	7570 aa	Known RBP	2.78	□□□□□ -1.96
HDLBP-233	ENST00000470710	KRTAP20-1	Q3LI63	56 aa		2.77	□□□□□ -1.97
HDLBP-233	ENST00000470710	KRTAP2-1	Q9BYU5	128 aa		2.74	□□□□□ -1.97
HDLBP-233	ENST00000470710	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.73	□□□□□ -1.97
HDLBP-233	ENST00000470710	LCE1E	Q5T753	118 aa		2.67	□□□□□ -1.98
HDLBP-233	ENST00000470710	MT1A	P04731	61 aa		2.66	□□□□□ -1.98
HDLBP-233	ENST00000470710	KRTAP5-4	Q6L8H1	288 aa		2.66	□□□□□ -1.98
HDLBP-233	ENST00000470710	KRTAP6-1	Q3LI64	71 aa		2.61	□□□□□ -1.99
HDLBP-233	ENST00000470710	KRTAP12-4	P60329	112 aa		2.56	□□□□□ -2
HDLBP-233	ENST00000470710	SYNE1	Q8NF91	8797 aa	Known RBP	2.53	□□□□□ -2
HDLBP-233	ENST00000470710	HMCN1	Q96RW7	5635 aa		2.53	□□□□□ -2
HDLBP-233	ENST00000470710		A0A0A0MQY5	61 aa		2.53	□□□□□ -2
HDLBP-233	ENST00000470710	MT3	P25713	68 aa		2.53	□□□□□ -2
HDLBP-233	ENST00000470710	MT4	P47944	62 aa		2.53	□□□□□ -2
HDLBP-233	ENST00000470710	KRTAP20-2	Q3LI61	65 aa		2.48	□□□□□ -2.01
HDLBP-233	ENST00000470710	KRTAP5-1	Q6L8H4	278 aa		2.46	□□□□□ -2.02
HDLBP-233	ENST00000470710	GPR98	Q8WXG9	6306 aa		2.43	□□□□□ -2.02
HDLBP-233	ENST00000470710	KRTAP6-2	Q3LI66	62 aa		2.42	□□□□□ -2.02
HDLBP-233	ENST00000470710	KRTAP5-2	Q701N4	177 aa		2.41	□□□□□ -2.02
HDLBP-233	ENST00000470710	KRTAP4-4	Q9BYR3	166 aa		2.37	□□□□□ -2.03
HDLBP-233	ENST00000470710	LCE1F	Q5T754	118 aa		2.35	□□□□□ -2.03
HDLBP-233	ENST00000470710	INE1	O15225	51 aa		2.34	□□□□□ -2.03
HDLBP-233	ENST00000470710	AHNAK2	Q8IVF2	5795 aa		2.32	□□□□□ -2.04
HDLBP-233	ENST00000470710	LCE3D	Q9BYE3	92 aa		2.25	□□□□□ -2.05
HDLBP-233	ENST00000470710	LCE3E	Q5T5B0	92 aa		2.18	□□□□□ -2.06
HDLBP-233	ENST00000470710	KRTAP5-10	Q6L8G5	202 aa		2.16	□□□□□ -2.06
HDLBP-233	ENST00000470710	OBSCN	Q5VST9	7968 aa		2.14	□□□□□ -2.07
HDLBP-233	ENST00000470710	KRTAP5-7	Q6L8G8	165 aa		2.12	□□□□□ -2.07
HDLBP-233	ENST00000470710	KRTAP5-8	O75690	187 aa		2.09	□□□□□ -2.07
HDLBP-233	ENST00000470710	MUC5AC	P98088	5654 aa		2.07	□□□□□ -2.08
HDLBP-233	ENST00000470710	LCE1C	Q5T751	118 aa		1.98	□□□□□ -2.09
HDLBP-233	ENST00000470710	LCE1B	Q5T7P3	118 aa		1.98	□□□□□ -2.09
HDLBP-233	ENST00000470710	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.87	□□□□□ -2.11
HDLBP-233	ENST00000470710	PRM1	P04553	51 aa		1.84	□□□□□ -2.11
HDLBP-233	ENST00000470710	AHNAK	Q09666	5890 aa	Known RBP	1.83	□□□□□ -2.12
HDLBP-233	ENST00000470710	KRTAP21-2	Q3LI59	83 aa		1.72	□□□□□ -2.13
HDLBP-233	ENST00000470710	PHGR1	C9JFL3	82 aa		1.5	□□□□□ -2.17
HDLBP-233	ENST00000470710	MUC19	Q7Z5P9	8384 aa		1.48	□□□□□ -2.17
HDLBP-233	ENST00000470710	KRTAP21-1	Q3LI58	79 aa		1.12	□□□□□ -2.23
HDLBP-233	ENST00000470710	MUC16	Q8WXI7	14507 aa		0.97	□□□□□ -2.25

Retrieved 78 of 20,778 RNA–protein pairs in 144.7 ms