RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 KRTAP23-1A1A580 65 aa3.31□□□□□ -1.88
GTF3A-206ENST00000470606 KRTAP25-1Q3LHN0 102 aa3.31□□□□□ -1.88
GTF3A-206ENST00000470606 TNP1P09430 55 aa3.31□□□□□ -1.88
GTF3A-206ENST00000470606 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
GTF3A-206ENST00000470606 KRTAP10-12P60413 245 aa3.27□□□□□ -1.89
GTF3A-206ENST00000470606 LCE3AQ5TA76 89 aa3.25□□□□□ -1.89
GTF3A-206ENST00000470606 LUZP6Q538Z0 58 aa3.25□□□□□ -1.89
GTF3A-206ENST00000470606 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
GTF3A-206ENST00000470606 KRTAP5-9P26371 169 aa3.23□□□□□ -1.89
GTF3A-206ENST00000470606 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.9
GTF3A-206ENST00000470606 KRTAP6-3Q3LI67 103 aa3.17□□□□□ -1.9
GTF3A-206ENST00000470606 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
GTF3A-206ENST00000470606 PP632Q6XCG6 107 aa3.16□□□□□ -1.9
GTF3A-206ENST00000470606 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
GTF3A-206ENST00000470606 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
GTF3A-206ENST00000470606 KRTAP19-7Q3SYF9 63 aa3.12□□□□□ -1.91
GTF3A-206ENST00000470606 KRTAP12-3P60328 96 aa3.09□□□□□ -1.91
GTF3A-206ENST00000470606 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
GTF3A-206ENST00000470606 KRTAP2-3P0C7H8 128 aa3.06□□□□□ -1.92
GTF3A-206ENST00000470606 KRTAP2-4Q9BYR9 128 aa3.06□□□□□ -1.92
GTF3A-206ENST00000470606 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
GTF3A-206ENST00000470606 MT1EP04732 61 aa3.03□□□□□ -1.92
GTF3A-206ENST00000470606 LCE4AQ5TA78 99 aa3.03□□□□□ -1.92
GTF3A-206ENST00000470606 KRTAP15-1Q3LI76 137 aa3.02□□□□□ -1.93
GTF3A-206ENST00000470606 MT1LQ93083 61 aa2.97□□□□□ -1.93
GTF3A-206ENST00000470606 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
GTF3A-206ENST00000470606 MDN1Q9NU22 5596 aa2.96□□□□□ -1.94
GTF3A-206ENST00000470606 KRTAP19-3Q7Z4W3 81 aa2.9□□□□□ -1.95
GTF3A-206ENST00000470606 KRTAP2-2Q9BYT5 123 aa2.9□□□□□ -1.95
GTF3A-206ENST00000470606 KRTAP2-1Q9BYU5 128 aa2.9□□□□□ -1.95
GTF3A-206ENST00000470606 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
GTF3A-206ENST00000470606 DSTQ03001 7570 aaKnown RBP2.89□□□□□ -1.95
GTF3A-206ENST00000470606 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
GTF3A-206ENST00000470606 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
GTF3A-206ENST00000470606 LCE5AQ5TCM9 118 aa2.88□□□□□ -1.95
GTF3A-206ENST00000470606 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
GTF3A-206ENST00000470606 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
GTF3A-206ENST00000470606 MT1GP13640 62 aa2.86□□□□□ -1.95
GTF3A-206ENST00000470606 MT1MQ8N339 61 aa2.85□□□□□ -1.95
GTF3A-206ENST00000470606 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
GTF3A-206ENST00000470606 SPRR2EP22531 72 aa2.82□□□□□ -1.96
GTF3A-206ENST00000470606 SPRR2BP35325 72 aa2.82□□□□□ -1.96
GTF3A-206ENST00000470606 SPRR2AP35326 72 aa2.82□□□□□ -1.96
GTF3A-206ENST00000470606 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
GTF3A-206ENST00000470606 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
GTF3A-206ENST00000470606 SPRR2DP22532 72 aa2.71□□□□□ -1.98
GTF3A-206ENST00000470606 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
GTF3A-206ENST00000470606 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
GTF3A-206ENST00000470606 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
GTF3A-206ENST00000470606 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
GTF3A-206ENST00000470606 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
GTF3A-206ENST00000470606 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
GTF3A-206ENST00000470606 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
GTF3A-206ENST00000470606 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
GTF3A-206ENST00000470606 KRTAP5-8O75690 187 aa2.53□□□□□ -2
GTF3A-206ENST00000470606 KRTAP6-1Q3LI64 71 aa2.53□□□□□ -2
GTF3A-206ENST00000470606 INE1O15225 51 aa2.52□□□□□ -2.01
GTF3A-206ENST00000470606 MT1AP04731 61 aa2.5□□□□□ -2.01
GTF3A-206ENST00000470606 MT4P47944 62 aa2.38□□□□□ -2.03
GTF3A-206ENST00000470606 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
GTF3A-206ENST00000470606 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
GTF3A-206ENST00000470606 KRTAP12-4P60329 112 aa2.34□□□□□ -2.04
GTF3A-206ENST00000470606 MT3P25713 68 aa2.32□□□□□ -2.04
GTF3A-206ENST00000470606 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
GTF3A-206ENST00000470606 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
GTF3A-206ENST00000470606 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
GTF3A-206ENST00000470606 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.06
GTF3A-206ENST00000470606 LCE3EQ5T5B0 92 aa2.08□□□□□ -2.08
GTF3A-206ENST00000470606 LCE1FQ5T754 118 aa2.07□□□□□ -2.08
GTF3A-206ENST00000470606 LCE1EQ5T753 118 aa1.96□□□□□ -2.1
GTF3A-206ENST00000470606 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
GTF3A-206ENST00000470606 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
GTF3A-206ENST00000470606 PRM1P04553 51 aa1.83□□□□□ -2.12
GTF3A-206ENST00000470606 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
GTF3A-206ENST00000470606 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
GTF3A-206ENST00000470606 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
GTF3A-206ENST00000470606 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
GTF3A-206ENST00000470606 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 251.5 ms