RNA–Protein interactions for RNA: ENST00000470280.1

LDHB-205, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-205ENST00000470280 KRTAP19-7Q3SYF9 63 aa3.96□□□□□ -1.78
LDHB-205ENST00000470280 KRTAP2-1Q9BYU5 128 aa3.95□□□□□ -1.78
LDHB-205ENST00000470280 SMIM26A0A096LP01 95 aa3.94□□□□□ -1.78
LDHB-205ENST00000470280 MT1EP04732 61 aa3.92□□□□□ -1.78
LDHB-205ENST00000470280 LINC01558Q9Y6Z2 57 aa3.9□□□□□ -1.79
LDHB-205ENST00000470280 TMEM258P61165 79 aa3.88□□□□□ -1.79
LDHB-205ENST00000470280 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
LDHB-205ENST00000470280 PRR15LQ9BU68 103 aa3.87□□□□□ -1.79
LDHB-205ENST00000470280 C10orf95Q9H7T3 257 aa3.87□□□□□ -1.79
LDHB-205ENST00000470280 KRTAP19-3Q7Z4W3 81 aa3.86□□□□□ -1.79
LDHB-205ENST00000470280 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
LDHB-205ENST00000470280 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
LDHB-205ENST00000470280 TNP1P09430 55 aa3.78□□□□□ -1.8
LDHB-205ENST00000470280 UQCR11O14957 56 aa3.77□□□□□ -1.81
LDHB-205ENST00000470280 MT1GP13640 62 aa3.76□□□□□ -1.81
LDHB-205ENST00000470280 MT1LQ93083 61 aa3.76□□□□□ -1.81
LDHB-205ENST00000470280 MT1MQ8N339 61 aa3.72□□□□□ -1.81
LDHB-205ENST00000470280 MT3P25713 68 aa3.7□□□□□ -1.82
LDHB-205ENST00000470280 MIR22HGQ0VDD5 57 aa3.7□□□□□ -1.82
LDHB-205ENST00000470280 PP632Q6XCG6 107 aa3.69□□□□□ -1.82
LDHB-205ENST00000470280 PSPHP1O15172 72 aa3.68□□□□□ -1.82
LDHB-205ENST00000470280 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
LDHB-205ENST00000470280 KRTAP4-3Q9BYR4 195 aa3.68□□□□□ -1.82
LDHB-205ENST00000470280 DSTQ03001 7570 aaKnown RBP3.66□□□□□ -1.82
LDHB-205ENST00000470280 Q1T7F1 81 aa3.65□□□□□ -1.83
LDHB-205ENST00000470280 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
LDHB-205ENST00000470280 KRTAP12-3P60328 96 aa3.63□□□□□ -1.83
LDHB-205ENST00000470280 V9GYY9 64 aa3.63□□□□□ -1.83
LDHB-205ENST00000470280 KRTAP25-1Q3LHN0 102 aa3.59□□□□□ -1.83
LDHB-205ENST00000470280 K7ERS5 55 aa3.57□□□□□ -1.84
LDHB-205ENST00000470280 A6NED7 52 aa3.53□□□□□ -1.84
LDHB-205ENST00000470280 MT4P47944 62 aa3.52□□□□□ -1.85
LDHB-205ENST00000470280 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
LDHB-205ENST00000470280 PCP4P48539 62 aa3.49□□□□□ -1.85
LDHB-205ENST00000470280 RPS28P62857 69 aaKnown RBP3.48□□□□□ -1.85
LDHB-205ENST00000470280 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
LDHB-205ENST00000470280 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
LDHB-205ENST00000470280 CDC42SE1Q9NRR8 79 aa3.42□□□□□ -1.86
LDHB-205ENST00000470280 ROMO1P60602 79 aa3.39□□□□□ -1.87
LDHB-205ENST00000470280 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
LDHB-205ENST00000470280 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
LDHB-205ENST00000470280 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
LDHB-205ENST00000470280 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
LDHB-205ENST00000470280 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
LDHB-205ENST00000470280 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
LDHB-205ENST00000470280 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
LDHB-205ENST00000470280 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
LDHB-205ENST00000470280 A0A0A0MQY5 61 aa3.25□□□□□ -1.89
LDHB-205ENST00000470280 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
LDHB-205ENST00000470280 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
LDHB-205ENST00000470280 MT1AP04731 61 aa3.18□□□□□ -1.9
LDHB-205ENST00000470280 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
LDHB-205ENST00000470280 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
LDHB-205ENST00000470280 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
LDHB-205ENST00000470280 BRK1Q8WUW1 75 aa3.07□□□□□ -1.92
LDHB-205ENST00000470280 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
LDHB-205ENST00000470280 SVIPQ8NHG7 77 aa3.01□□□□□ -1.93
LDHB-205ENST00000470280 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
LDHB-205ENST00000470280 PMAIP1Q13794 54 aa2.87□□□□□ -1.95
LDHB-205ENST00000470280 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
LDHB-205ENST00000470280 NDUFAF8A1L188 74 aa2.77□□□□□ -1.97
LDHB-205ENST00000470280 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
LDHB-205ENST00000470280 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
LDHB-205ENST00000470280 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
LDHB-205ENST00000470280 PRO0628Q9UI54 55 aa2.67□□□□□ -1.98
LDHB-205ENST00000470280 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
LDHB-205ENST00000470280 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
LDHB-205ENST00000470280 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
LDHB-205ENST00000470280 KTN1-AS1Q86SY8 53 aa2.56□□□□□ -2
LDHB-205ENST00000470280 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
LDHB-205ENST00000470280 LUZP6Q538Z0 58 aa2.29□□□□□ -2.04
LDHB-205ENST00000470280 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
LDHB-205ENST00000470280 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
LDHB-205ENST00000470280 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
LDHB-205ENST00000470280 PRM1P04553 51 aa1.75□□□□□ -2.13
LDHB-205ENST00000470280 INE1O15225 51 aa1.47□□□□□ -2.17
LDHB-205ENST00000470280 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
LDHB-205ENST00000470280 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 13.5 ms