RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 KRTAP10-7P60409 375 aaPredicted RBP2.75□□□□□ -1.97
KDM3A-210ENST00000470160 SSPOA2VEC9 5147 aa2.75□□□□□ -1.97
KDM3A-210ENST00000470160 LCE3AQ5TA76 89 aa2.74□□□□□ -1.97
KDM3A-210ENST00000470160 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
KDM3A-210ENST00000470160 KRTAP19-4Q3LI73 84 aa2.67□□□□□ -1.98
KDM3A-210ENST00000470160 SPRR5A0A1B0GTR4 108 aa2.66□□□□□ -1.98
KDM3A-210ENST00000470160 KRTAP12-3P60328 96 aa2.65□□□□□ -1.99
KDM3A-210ENST00000470160 CRCT1Q9UGL9 99 aa2.65□□□□□ -1.99
KDM3A-210ENST00000470160 KRTAP19-7Q3SYF9 63 aa2.61□□□□□ -1.99
KDM3A-210ENST00000470160 KRTAP19-5Q3LI72 72 aa2.6□□□□□ -1.99
KDM3A-210ENST00000470160 LCE5AQ5TCM9 118 aa2.58□□□□□ -2
KDM3A-210ENST00000470160 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
KDM3A-210ENST00000470160 FCGBPQ9Y6R7 5405 aaPredicted RBP2.55□□□□□ -2
KDM3A-210ENST00000470160 MT1EP04732 61 aa2.55□□□□□ -2
KDM3A-210ENST00000470160 MT1LQ93083 61 aa2.51□□□□□ -2.01
KDM3A-210ENST00000470160 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
KDM3A-210ENST00000470160 KMT2DO14686 5537 aa2.48□□□□□ -2.01
KDM3A-210ENST00000470160 KRTAP5-9P26371 169 aa2.47□□□□□ -2.01
KDM3A-210ENST00000470160 MT1GP13640 62 aa2.44□□□□□ -2.02
KDM3A-210ENST00000470160 KRTAP19-3Q7Z4W3 81 aa2.44□□□□□ -2.02
KDM3A-210ENST00000470160 KRTAP2-2Q9BYT5 123 aa2.43□□□□□ -2.02
KDM3A-210ENST00000470160 KRTAP6-3Q3LI67 103 aa2.39□□□□□ -2.03
KDM3A-210ENST00000470160 MT1MQ8N339 61 aa2.39□□□□□ -2.03
KDM3A-210ENST00000470160 FSIP2Q5CZC0 6907 aa2.38□□□□□ -2.03
KDM3A-210ENST00000470160 SPRR2FQ96RM1 72 aa2.37□□□□□ -2.03
KDM3A-210ENST00000470160 KRTAP9-6A8MVA2 160 aa2.36□□□□□ -2.03
KDM3A-210ENST00000470160 LCE1AQ5T7P2 110 aa2.35□□□□□ -2.03
KDM3A-210ENST00000470160 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
KDM3A-210ENST00000470160 LCE1EQ5T753 118 aa2.33□□□□□ -2.04
KDM3A-210ENST00000470160 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
KDM3A-210ENST00000470160 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
KDM3A-210ENST00000470160 MUC12Q9UKN1 5478 aa2.28□□□□□ -2.04
KDM3A-210ENST00000470160 KRTAP2-3P0C7H8 128 aa2.28□□□□□ -2.05
KDM3A-210ENST00000470160 KRTAP2-4Q9BYR9 128 aa2.28□□□□□ -2.05
KDM3A-210ENST00000470160 KRTAP2-1Q9BYU5 128 aa2.28□□□□□ -2.05
KDM3A-210ENST00000470160 KRTAP20-1Q3LI63 56 aa2.27□□□□□ -2.05
KDM3A-210ENST00000470160 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
KDM3A-210ENST00000470160 SPRR2EP22531 72 aa2.25□□□□□ -2.05
KDM3A-210ENST00000470160 SPRR2BP35325 72 aa2.25□□□□□ -2.05
KDM3A-210ENST00000470160 SPRR2AP35326 72 aa2.25□□□□□ -2.05
KDM3A-210ENST00000470160 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
KDM3A-210ENST00000470160 SYNE2Q8WXH0 6885 aaKnown RBP2.21□□□□□ -2.06
KDM3A-210ENST00000470160 MDN1Q9NU22 5596 aa2.17□□□□□ -2.06
KDM3A-210ENST00000470160 SPRR2DP22532 72 aa2.17□□□□□ -2.06
KDM3A-210ENST00000470160 MT1AP04731 61 aa2.16□□□□□ -2.06
KDM3A-210ENST00000470160 NEBP20929 6669 aa2.15□□□□□ -2.07
KDM3A-210ENST00000470160 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
KDM3A-210ENST00000470160 KRTAP5-4Q6L8H1 288 aa2.1□□□□□ -2.07
KDM3A-210ENST00000470160 KRTAP6-1Q3LI64 71 aa2.08□□□□□ -2.08
KDM3A-210ENST00000470160 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
KDM3A-210ENST00000470160 DSTQ03001 7570 aaKnown RBP2□□□□□ -2.09
KDM3A-210ENST00000470160 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
KDM3A-210ENST00000470160 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
KDM3A-210ENST00000470160 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
KDM3A-210ENST00000470160 MT3P25713 68 aa1.93□□□□□ -2.1
KDM3A-210ENST00000470160 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
KDM3A-210ENST00000470160 KRTAP20-2Q3LI61 65 aa1.9□□□□□ -2.11
KDM3A-210ENST00000470160 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
KDM3A-210ENST00000470160 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
KDM3A-210ENST00000470160 PRM1P04553 51 aa1.88□□□□□ -2.11
KDM3A-210ENST00000470160 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
KDM3A-210ENST00000470160 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
KDM3A-210ENST00000470160 MT4P47944 62 aa1.82□□□□□ -2.12
KDM3A-210ENST00000470160 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
KDM3A-210ENST00000470160 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
KDM3A-210ENST00000470160 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
KDM3A-210ENST00000470160 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
KDM3A-210ENST00000470160 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
KDM3A-210ENST00000470160 AHNAK2Q8IVF2 5795 aa1.7□□□□□ -2.14
KDM3A-210ENST00000470160 KRTAP5-1Q6L8H4 278 aa1.7□□□□□ -2.14
KDM3A-210ENST00000470160 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
KDM3A-210ENST00000470160 LCE1CQ5T751 118 aa1.6□□□□□ -2.15
KDM3A-210ENST00000470160 LCE1BQ5T7P3 118 aa1.6□□□□□ -2.15
KDM3A-210ENST00000470160 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
KDM3A-210ENST00000470160 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
KDM3A-210ENST00000470160 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
KDM3A-210ENST00000470160 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
KDM3A-210ENST00000470160 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 15.6 ms