RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 CENPFP49454 3210 aa0.38□□□□□ -2.35
BRCA2-202ENST00000470094 EYSQ5T1H1 3165 aa0.37□□□□□ -2.35
BRCA2-202ENST00000470094 MYO15AQ9UKN7 3530 aa0.37□□□□□ -2.35
BRCA2-202ENST00000470094 DOPEY1Q5JWR5 2465 aa0.37□□□□□ -2.35
BRCA2-202ENST00000470094 SYNE2Q8WXH0 6885 aaKnown RBP0.37□□□□□ -2.35
BRCA2-202ENST00000470094 A0A096LNI7 61 aa0.37□□□□□ -2.35
BRCA2-202ENST00000470094 DEFB110Q30KQ9 67 aa0.37□□□□□ -2.35
BRCA2-202ENST00000470094 U3KQA8 63 aa0.37□□□□□ -2.35
BRCA2-202ENST00000470094 FLNAP21333 2647 aaKnown RBP0.37□□□□□ -2.35
BRCA2-202ENST00000470094 DNAH14Q0VDD8 3507 aa0.37□□□□□ -2.35
BRCA2-202ENST00000470094 FASNP49327 2511 aaKnown RBP0.37□□□□□ -2.35
BRCA2-202ENST00000470094 UNC80Q8N2C7 3258 aa0.37□□□□□ -2.35
BRCA2-202ENST00000470094 WDFY3Q8IZQ1 3526 aa0.37□□□□□ -2.35
BRCA2-202ENST00000470094 CEP295Q9C0D2 2601 aa0.36□□□□□ -2.35
BRCA2-202ENST00000470094 SPTAN1Q13813 2472 aaKnown RBP0.35□□□□□ -2.35
BRCA2-202ENST00000470094 SPRR2BP35325 72 aa0.35□□□□□ -2.35
BRCA2-202ENST00000470094 MAST4O15021 2626 aa0.34□□□□□ -2.35
BRCA2-202ENST00000470094 SPRR2DP22532 72 aa0.34□□□□□ -2.36
BRCA2-202ENST00000470094 SPRR2AP35326 72 aa0.34□□□□□ -2.36
BRCA2-202ENST00000470094 DEFB133Q30KQ1 61 aa0.34□□□□□ -2.36
BRCA2-202ENST00000470094 TLN1Q9Y490 2541 aaKnown RBP0.33□□□□□ -2.36
BRCA2-202ENST00000470094 FSIP2Q5CZC0 6907 aa0.33□□□□□ -2.36
BRCA2-202ENST00000470094 MT1EP04732 61 aa0.33□□□□□ -2.36
BRCA2-202ENST00000470094 STARD9Q9P2P6 4700 aa0.33□□□□□ -2.36
BRCA2-202ENST00000470094 DNHD1Q96M86 4753 aa0.33□□□□□ -2.36
BRCA2-202ENST00000470094 IGSF10Q6WRI0 2623 aa0.32□□□□□ -2.36
BRCA2-202ENST00000470094 LRP2P98164 4655 aa0.32□□□□□ -2.36
BRCA2-202ENST00000470094 MYO9AB2RTY4 2548 aa0.32□□□□□ -2.36
BRCA2-202ENST00000470094 HERC1Q15751 4861 aa0.32□□□□□ -2.36
BRCA2-202ENST00000470094 MGAM2Q2M2H8 2515 aa0.31□□□□□ -2.36
BRCA2-202ENST00000470094 KRTAP6-2Q3LI66 62 aa0.31□□□□□ -2.36
BRCA2-202ENST00000470094 SPRR2FQ96RM1 72 aa0.31□□□□□ -2.36
BRCA2-202ENST00000470094 FAT4Q6V0I7 4981 aa0.31□□□□□ -2.36
BRCA2-202ENST00000470094 RYR1P21817 5038 aa0.31□□□□□ -2.36
BRCA2-202ENST00000470094 HYDINQ4G0P3 5121 aa0.3□□□□□ -2.36
BRCA2-202ENST00000470094 STAB2Q8WWQ8 2551 aa0.3□□□□□ -2.36
BRCA2-202ENST00000470094 RYR3Q15413 4870 aa0.3□□□□□ -2.36
BRCA2-202ENST00000470094 CD52P31358 61 aa0.3□□□□□ -2.36
BRCA2-202ENST00000470094 MT1LQ93083 61 aa0.3□□□□□ -2.36
BRCA2-202ENST00000470094 MACF1Q9UPN3 7388 aaKnown RBP0.3□□□□□ -2.36
BRCA2-202ENST00000470094 EPPK1P58107 5090 aaKnown RBP0.29□□□□□ -2.36
BRCA2-202ENST00000470094 SPRR2EP22531 72 aa0.29□□□□□ -2.36
BRCA2-202ENST00000470094 MT1HP80294 61 aa0.29□□□□□ -2.36
BRCA2-202ENST00000470094 PCLOQ9Y6V0 5065 aa0.29□□□□□ -2.36
BRCA2-202ENST00000470094 SPRR2GQ9BYE4 73 aa0.28□□□□□ -2.36
BRCA2-202ENST00000470094 CDH23Q9H251 3354 aa0.28□□□□□ -2.36
BRCA2-202ENST00000470094 RYR2Q92736 4967 aa0.28□□□□□ -2.36
BRCA2-202ENST00000470094 BIRC6Q9NR09 4857 aa0.27□□□□□ -2.37
BRCA2-202ENST00000470094 RNF213Q63HN8 5207 aa0.27□□□□□ -2.37
BRCA2-202ENST00000470094 HMCN2Q8NDA2 5059 aa0.27□□□□□ -2.37
BRCA2-202ENST00000470094 KMT2CQ8NEZ4 4911 aaKnown RBP0.26□□□□□ -2.37
BRCA2-202ENST00000470094 ABCA13Q86UQ4 5058 aa0.26□□□□□ -2.37
BRCA2-202ENST00000470094 UBR4Q5T4S7 5183 aa0.26□□□□□ -2.37
BRCA2-202ENST00000470094 HERC2O95714 4834 aa0.25□□□□□ -2.37
BRCA2-202ENST00000470094 MT1XP80297 61 aa0.24□□□□□ -2.37
BRCA2-202ENST00000470094 KRTAP19-8Q3LI54 63 aa0.24□□□□□ -2.37
BRCA2-202ENST00000470094 KIAA1109Q2LD37 5005 aa0.23□□□□□ -2.37
BRCA2-202ENST00000470094 KRTAP19-2Q3LHN2 52 aa0.23□□□□□ -2.37
BRCA2-202ENST00000470094 MUC12Q9UKN1 5478 aa0.23□□□□□ -2.37
BRCA2-202ENST00000470094 USH2AO75445 5202 aa0.22□□□□□ -2.37
BRCA2-202ENST00000470094 MUC2Q02817 5179 aa0.22□□□□□ -2.37
BRCA2-202ENST00000470094 SSPOA2VEC9 5147 aa0.22□□□□□ -2.37
BRCA2-202ENST00000470094 HTN3P15516 51 aa0.22□□□□□ -2.37
BRCA2-202ENST00000470094 DEFB4AO15263 64 aa0.21□□□□□ -2.38
BRCA2-202ENST00000470094 KRTAP19-7Q3SYF9 63 aa0.2□□□□□ -2.38
BRCA2-202ENST00000470094 MT1MQ8N339 61 aa0.19□□□□□ -2.38
BRCA2-202ENST00000470094 MT2AP02795 61 aa0.18□□□□□ -2.38
BRCA2-202ENST00000470094 MT1GP13640 62 aa0.17□□□□□ -2.38
BRCA2-202ENST00000470094 MT1BP07438 61 aa0.16□□□□□ -2.38
BRCA2-202ENST00000470094 KRTAP6-1Q3LI64 71 aa0.15□□□□□ -2.39
BRCA2-202ENST00000470094 MT1HL1P0DM35 61 aa0.14□□□□□ -2.39
BRCA2-202ENST00000470094 MT1FP04733 61 aa0.13□□□□□ -2.39
BRCA2-202ENST00000470094 DSTQ03001 7570 aaKnown RBP0.13□□□□□ -2.39
BRCA2-202ENST00000470094 NEBP20929 6669 aa0.09□□□□□ -2.39
BRCA2-202ENST00000470094 KRTAP20-1Q3LI63 56 aa0.07□□□□□ -2.4
BRCA2-202ENST00000470094 MT4P47944 62 aa0.05□□□□□ -2.4
BRCA2-202ENST00000470094 KRTAP19-6Q3LI70 58 aa0.05□□□□□ -2.4
BRCA2-202ENST00000470094 KRTAP20-2Q3LI61 65 aa0.03□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 40.9 ms