RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 VPS13BQ7Z7G8 4022 aa2.17□□□□□ -2.06
CCDC144A-212ENST00000470068 MT1LQ93083 61 aa2.16□□□□□ -2.06
CCDC144A-212ENST00000470068 FAT4Q6V0I7 4981 aa2.16□□□□□ -2.06
CCDC144A-212ENST00000470068 STARD9Q9P2P6 4700 aa2.15□□□□□ -2.07
CCDC144A-212ENST00000470068 KRTAP9-8Q9BYQ0 159 aa2.14□□□□□ -2.07
CCDC144A-212ENST00000470068 MT1EP04732 61 aa2.14□□□□□ -2.07
CCDC144A-212ENST00000470068 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
CCDC144A-212ENST00000470068 KRTAP9-3Q9BYQ3 159 aa2.13□□□□□ -2.07
CCDC144A-212ENST00000470068 MT3P25713 68 aa2.13□□□□□ -2.07
CCDC144A-212ENST00000470068 HMCN2Q8NDA2 5059 aa2.13□□□□□ -2.07
CCDC144A-212ENST00000470068 PKD1P98161 4303 aa2.13□□□□□ -2.07
CCDC144A-212ENST00000470068 LYSTQ99698 3801 aa2.12□□□□□ -2.07
CCDC144A-212ENST00000470068 PKHD1P08F94 4074 aa2.12□□□□□ -2.07
CCDC144A-212ENST00000470068 MT1XP80297 61 aa2.12□□□□□ -2.07
CCDC144A-212ENST00000470068 MDN1Q9NU22 5596 aa2.1□□□□□ -2.07
CCDC144A-212ENST00000470068 KRTAP4-8A0A0G2JLE6 195 aa2.1□□□□□ -2.07
CCDC144A-212ENST00000470068 CMYA5Q8N3K9 4069 aa2.1□□□□□ -2.07
CCDC144A-212ENST00000470068 MT1BP07438 61 aa2.1□□□□□ -2.07
CCDC144A-212ENST00000470068 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
CCDC144A-212ENST00000470068 LCE1DQ5T752 114 aa2.09□□□□□ -2.07
CCDC144A-212ENST00000470068 CSMD3Q7Z407 3707 aa2.08□□□□□ -2.08
CCDC144A-212ENST00000470068 KRTAP9-9Q9BYP9 154 aa2.07□□□□□ -2.08
CCDC144A-212ENST00000470068 KRTAP9-4Q9BYQ2 154 aa2.07□□□□□ -2.08
CCDC144A-212ENST00000470068 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
CCDC144A-212ENST00000470068 KRTAP19-3Q7Z4W3 81 aa2.05□□□□□ -2.08
CCDC144A-212ENST00000470068 KRTAP4-7Q9BYR0 210 aa2.04□□□□□ -2.08
CCDC144A-212ENST00000470068 DNAH7Q8WXX0 4024 aa2.04□□□□□ -2.08
CCDC144A-212ENST00000470068 OBSCNQ5VST9 7968 aa2.03□□□□□ -2.08
CCDC144A-212ENST00000470068 HECTD4Q9Y4D8 3996 aa2.02□□□□□ -2.09
CCDC144A-212ENST00000470068 LCE1AQ5T7P2 110 aa2.02□□□□□ -2.09
CCDC144A-212ENST00000470068 MT1MQ8N339 61 aa2□□□□□ -2.09
CCDC144A-212ENST00000470068 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
CCDC144A-212ENST00000470068 MT1AP04731 61 aa1.97□□□□□ -2.09
CCDC144A-212ENST00000470068 KRTAP4-2Q9BYR5 136 aa1.96□□□□□ -2.1
CCDC144A-212ENST00000470068 LCE5AQ5TCM9 118 aa1.95□□□□□ -2.1
CCDC144A-212ENST00000470068 USH2AO75445 5202 aa1.95□□□□□ -2.1
CCDC144A-212ENST00000470068 KMT2AQ03164 3969 aa1.95□□□□□ -2.1
CCDC144A-212ENST00000470068 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
CCDC144A-212ENST00000470068 FCGBPQ9Y6R7 5405 aaPredicted RBP1.92□□□□□ -2.1
CCDC144A-212ENST00000470068 KRTAP19-2Q3LHN2 52 aa1.91□□□□□ -2.1
CCDC144A-212ENST00000470068 SSPOA2VEC9 5147 aa1.91□□□□□ -2.1
CCDC144A-212ENST00000470068 MUC17Q685J3 4493 aa1.89□□□□□ -2.11
CCDC144A-212ENST00000470068 KRTAP4-11Q9BYQ6 195 aa1.86□□□□□ -2.11
CCDC144A-212ENST00000470068 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
CCDC144A-212ENST00000470068 LPAP08519 4548 aa1.85□□□□□ -2.11
CCDC144A-212ENST00000470068 TNXBP22105 4242 aa1.85□□□□□ -2.11
CCDC144A-212ENST00000470068 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
CCDC144A-212ENST00000470068 LCE1EQ5T753 118 aa1.85□□□□□ -2.11
CCDC144A-212ENST00000470068 LCE1FQ5T754 118 aa1.85□□□□□ -2.11
CCDC144A-212ENST00000470068 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.11
CCDC144A-212ENST00000470068 KRTAP5-3Q6L8H2 238 aa1.84□□□□□ -2.12
CCDC144A-212ENST00000470068 HMCN1Q96RW7 5635 aa1.76□□□□□ -2.13
CCDC144A-212ENST00000470068 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
CCDC144A-212ENST00000470068 KRTAP5-9P26371 169 aa1.75□□□□□ -2.13
CCDC144A-212ENST00000470068 PRM1P04553 51 aa1.72□□□□□ -2.13
CCDC144A-212ENST00000470068 FLGP20930 4061 aaPredicted RBP1.71□□□□□ -2.14
CCDC144A-212ENST00000470068 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
CCDC144A-212ENST00000470068 KRTAP4-3Q9BYR4 195 aa1.67□□□□□ -2.14
CCDC144A-212ENST00000470068 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
CCDC144A-212ENST00000470068 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
CCDC144A-212ENST00000470068 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
CCDC144A-212ENST00000470068 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
CCDC144A-212ENST00000470068 KRTAP6-1Q3LI64 71 aa1.52□□□□□ -2.17
CCDC144A-212ENST00000470068 MUC12Q9UKN1 5478 aa1.52□□□□□ -2.17
CCDC144A-212ENST00000470068 KRTAP5-4Q6L8H1 288 aa1.5□□□□□ -2.17
CCDC144A-212ENST00000470068 KRTAP9-6A8MVA2 160 aa1.48□□□□□ -2.17
CCDC144A-212ENST00000470068 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
CCDC144A-212ENST00000470068 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
CCDC144A-212ENST00000470068 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
CCDC144A-212ENST00000470068 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
CCDC144A-212ENST00000470068 KRTAP5-5Q701N2 237 aaPredicted RBP1.39□□□□□ -2.19
CCDC144A-212ENST00000470068 KRTAP5-10Q6L8G5 202 aa1.38□□□□□ -2.19
CCDC144A-212ENST00000470068 KRTAP5-11Q6L8G4 156 aa1.32□□□□□ -2.2
CCDC144A-212ENST00000470068 KRTAP4-4Q9BYR3 166 aa1.3□□□□□ -2.2
CCDC144A-212ENST00000470068 KRTAP5-1Q6L8H4 278 aa1.11□□□□□ -2.23
CCDC144A-212ENST00000470068 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
CCDC144A-212ENST00000470068 KRTAP21-2Q3LI59 83 aa0.87□□□□□ -2.27
CCDC144A-212ENST00000470068 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 49.8 ms