RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 KRTAP4-3Q9BYR4 195 aa5.95□□□□□ -1.46
C4A-250ENST00000469975 LINC01558Q9Y6Z2 57 aa5.95□□□□□ -1.46
C4A-250ENST00000469975 A8MU10 97 aa5.94□□□□□ -1.46
C4A-250ENST00000469975 LCE4AQ5TA78 99 aa5.92□□□□□ -1.46
C4A-250ENST00000469975 LCE3AQ5TA76 89 aa5.91□□□□□ -1.46
C4A-250ENST00000469975 C10orf95Q9H7T3 257 aa5.9□□□□□ -1.46
C4A-250ENST00000469975 SMIM26A0A096LP01 95 aa5.87□□□□□ -1.47
C4A-250ENST00000469975 AHNAK2Q8IVF2 5795 aa5.86□□□□□ -1.47
C4A-250ENST00000469975 KRTAP5-4Q6L8H1 288 aa5.81□□□□□ -1.48
C4A-250ENST00000469975 TNP1P09430 55 aa5.8□□□□□ -1.48
C4A-250ENST00000469975 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
C4A-250ENST00000469975 V9GYY9 64 aa5.78□□□□□ -1.48
C4A-250ENST00000469975 UQCR11O14957 56 aa5.77□□□□□ -1.49
C4A-250ENST00000469975 PSPHP1O15172 72 aa5.77□□□□□ -1.49
C4A-250ENST00000469975 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
C4A-250ENST00000469975 Q1T7F1 81 aa5.74□□□□□ -1.49
C4A-250ENST00000469975 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
C4A-250ENST00000469975 MIR22HGQ0VDD5 57 aa5.69□□□□□ -1.5
C4A-250ENST00000469975 KRTAP5-10Q6L8G5 202 aa5.68□□□□□ -1.5
C4A-250ENST00000469975 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
C4A-250ENST00000469975 A6NED7 52 aa5.6□□□□□ -1.51
C4A-250ENST00000469975 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
C4A-250ENST00000469975 K7ERS5 55 aa5.53□□□□□ -1.52
C4A-250ENST00000469975 KRTAP5-3Q6L8H2 238 aa5.52□□□□□ -1.53
C4A-250ENST00000469975 KRTAP20-2Q3LI61 65 aa5.51□□□□□ -1.53
C4A-250ENST00000469975 KRTAP5-5Q701N2 237 aaPredicted RBP5.51□□□□□ -1.53
C4A-250ENST00000469975 KRTAP5-7Q6L8G8 165 aa5.47□□□□□ -1.53
C4A-250ENST00000469975 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.54
C4A-250ENST00000469975 SPRR5A0A1B0GTR4 108 aa5.41□□□□□ -1.54
C4A-250ENST00000469975 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
C4A-250ENST00000469975 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
C4A-250ENST00000469975 PMAIP1Q13794 54 aa5.37□□□□□ -1.55
C4A-250ENST00000469975 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
C4A-250ENST00000469975 CDC42SE1Q9NRR8 79 aa5.36□□□□□ -1.55
C4A-250ENST00000469975 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
C4A-250ENST00000469975 ROMO1P60602 79 aa5.2□□□□□ -1.58
C4A-250ENST00000469975 KRTAP15-1Q3LI76 137 aa5.2□□□□□ -1.58
C4A-250ENST00000469975 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
C4A-250ENST00000469975 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
C4A-250ENST00000469975 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
C4A-250ENST00000469975 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
C4A-250ENST00000469975 MT1AP04731 61 aa5.07□□□□□ -1.6
C4A-250ENST00000469975 KRTAP4-11Q9BYQ6 195 aa5.07□□□□□ -1.6
C4A-250ENST00000469975 KRTAP5-2Q701N4 177 aa5.06□□□□□ -1.6
C4A-250ENST00000469975 KRTAP9-6A8MVA2 160 aa4.96□□□□□ -1.62
C4A-250ENST00000469975 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
C4A-250ENST00000469975 KRTAP5-8O75690 187 aa4.91□□□□□ -1.62
C4A-250ENST00000469975 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
C4A-250ENST00000469975 AHNAKQ09666 5890 aaKnown RBP4.87□□□□□ -1.63
C4A-250ENST00000469975 PRAC1Q96KF2 57 aa4.83□□□□□ -1.64
C4A-250ENST00000469975 OBSCNQ5VST9 7968 aa4.83□□□□□ -1.64
C4A-250ENST00000469975 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
C4A-250ENST00000469975 MUC5BQ9HC84 5762 aaPredicted RBP4.81□□□□□ -1.64
C4A-250ENST00000469975 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
C4A-250ENST00000469975 MT3P25713 68 aa4.62□□□□□ -1.67
C4A-250ENST00000469975 KRTAP5-1Q6L8H4 278 aa4.58□□□□□ -1.68
C4A-250ENST00000469975 H3BS24 57 aa4.5□□□□□ -1.69
C4A-250ENST00000469975 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
C4A-250ENST00000469975 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
C4A-250ENST00000469975 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
C4A-250ENST00000469975 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
C4A-250ENST00000469975 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
C4A-250ENST00000469975 LUZP6Q538Z0 58 aa3.94□□□□□ -1.78
C4A-250ENST00000469975 A0A0A0MQY5 61 aa3.85□□□□□ -1.79
C4A-250ENST00000469975 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
C4A-250ENST00000469975 LCE3DQ9BYE3 92 aa3.68□□□□□ -1.82
C4A-250ENST00000469975 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
C4A-250ENST00000469975 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
C4A-250ENST00000469975 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
C4A-250ENST00000469975 INE1O15225 51 aa3.51□□□□□ -1.85
C4A-250ENST00000469975 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
C4A-250ENST00000469975 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
C4A-250ENST00000469975 PHGR1C9JFL3 82 aa3.32□□□□□ -1.88
C4A-250ENST00000469975 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
C4A-250ENST00000469975 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
C4A-250ENST00000469975 PRM1P04553 51 aa2.7□□□□□ -1.98
C4A-250ENST00000469975 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
C4A-250ENST00000469975 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 78 ms