RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 PRR15LQ9BU68 103 aa4.6□□□□□ -1.67
COMMD2-202ENST00000469896 S4R3F8 94 aa4.6□□□□□ -1.67
COMMD2-202ENST00000469896 CHKB-CPT1BH3BT56 60 aa4.57□□□□□ -1.68
COMMD2-202ENST00000469896 MT4P47944 62 aa4.57□□□□□ -1.68
COMMD2-202ENST00000469896 A8MU10 97 aa4.54□□□□□ -1.68
COMMD2-202ENST00000469896 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
COMMD2-202ENST00000469896 PLAC4Q8WY50 150 aa4.54□□□□□ -1.68
COMMD2-202ENST00000469896 CDC42SE1Q9NRR8 79 aa4.53□□□□□ -1.68
COMMD2-202ENST00000469896 LCE1FQ5T754 118 aa4.52□□□□□ -1.69
COMMD2-202ENST00000469896 KRTAP10-12P60413 245 aa4.51□□□□□ -1.69
COMMD2-202ENST00000469896 PMAIP1Q13794 54 aa4.51□□□□□ -1.69
COMMD2-202ENST00000469896 SPTSSBQ8NFR3 76 aa4.51□□□□□ -1.69
COMMD2-202ENST00000469896 A6NED7 52 aa4.5□□□□□ -1.69
COMMD2-202ENST00000469896 KRTAP5-4Q6L8H1 288 aa4.46□□□□□ -1.7
COMMD2-202ENST00000469896 KRTAP4-4Q9BYR3 166 aa4.46□□□□□ -1.7
COMMD2-202ENST00000469896 KTN1-AS1Q86SY8 53 aa4.44□□□□□ -1.7
COMMD2-202ENST00000469896 A0A1B0GU69 56 aa4.38□□□□□ -1.71
COMMD2-202ENST00000469896 SEC61GP60059 68 aa4.38□□□□□ -1.71
COMMD2-202ENST00000469896 SPATA8Q6RVD6 105 aa4.37□□□□□ -1.71
COMMD2-202ENST00000469896 A0A0A0MQY5 61 aa4.35□□□□□ -1.71
COMMD2-202ENST00000469896 UQCR11O14957 56 aa4.31□□□□□ -1.72
COMMD2-202ENST00000469896 KRTAP19-3Q7Z4W3 81 aa4.31□□□□□ -1.72
COMMD2-202ENST00000469896 MIR22HGQ0VDD5 57 aa4.3□□□□□ -1.72
COMMD2-202ENST00000469896 H0YAA0 97 aa4.29□□□□□ -1.72
COMMD2-202ENST00000469896 AHNAKQ09666 5890 aaKnown RBP4.29□□□□□ -1.72
COMMD2-202ENST00000469896 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
COMMD2-202ENST00000469896 ADM2Q7Z4H4 148 aa4.22□□□□□ -1.73
COMMD2-202ENST00000469896 R4GN34 69 aa4.22□□□□□ -1.73
COMMD2-202ENST00000469896 A0A1B0GU33 70 aa4.21□□□□□ -1.74
COMMD2-202ENST00000469896 MT1EP04732 61 aa4.18□□□□□ -1.74
COMMD2-202ENST00000469896 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
COMMD2-202ENST00000469896 PP632Q6XCG6 107 aa4.17□□□□□ -1.74
COMMD2-202ENST00000469896 KRTAP19-7Q3SYF9 63 aa4.15□□□□□ -1.75
COMMD2-202ENST00000469896 MT1GP13640 62 aa4.14□□□□□ -1.75
COMMD2-202ENST00000469896 MUC5ACP98088 5654 aa4.13□□□□□ -1.75
COMMD2-202ENST00000469896 M0QZ58 72 aa4.13□□□□□ -1.75
COMMD2-202ENST00000469896 LINC01554Q52M75 96 aa4.13□□□□□ -1.75
COMMD2-202ENST00000469896 K7ERS5 55 aa4.1□□□□□ -1.75
COMMD2-202ENST00000469896 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
COMMD2-202ENST00000469896 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
COMMD2-202ENST00000469896 P0C880 135 aa4.05□□□□□ -1.76
COMMD2-202ENST00000469896 MT1MQ8N339 61 aa4.03□□□□□ -1.76
COMMD2-202ENST00000469896 KRTAP25-1Q3LHN0 102 aa4.01□□□□□ -1.77
COMMD2-202ENST00000469896 KRTAP13-4Q3LI77 160 aa3.99□□□□□ -1.77
COMMD2-202ENST00000469896 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
COMMD2-202ENST00000469896 ROMO1P60602 79 aa3.94□□□□□ -1.78
COMMD2-202ENST00000469896 KRTAP4-3Q9BYR4 195 aa3.94□□□□□ -1.78
COMMD2-202ENST00000469896 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
COMMD2-202ENST00000469896 KRTAP12-1P59990 96 aa3.91□□□□□ -1.78
COMMD2-202ENST00000469896 A0A0D9SG42 100 aa3.9□□□□□ -1.79
COMMD2-202ENST00000469896 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
COMMD2-202ENST00000469896 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
COMMD2-202ENST00000469896 MT1LQ93083 61 aa3.87□□□□□ -1.79
COMMD2-202ENST00000469896 KRTAP5-8O75690 187 aa3.84□□□□□ -1.79
COMMD2-202ENST00000469896 SPINT4Q6UDR6 99 aa3.84□□□□□ -1.79
COMMD2-202ENST00000469896 LCE3AQ5TA76 89 aa3.8□□□□□ -1.8
COMMD2-202ENST00000469896 CAMK2N1Q7Z7J9 78 aa3.79□□□□□ -1.8
COMMD2-202ENST00000469896 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
COMMD2-202ENST00000469896 C10orf95Q9H7T3 257 aa3.74□□□□□ -1.81
COMMD2-202ENST00000469896 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
COMMD2-202ENST00000469896 SYNE1Q8NF91 8797 aaKnown RBP3.7□□□□□ -1.82
COMMD2-202ENST00000469896 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
COMMD2-202ENST00000469896 TNP1P09430 55 aa3.62□□□□□ -1.83
COMMD2-202ENST00000469896 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
COMMD2-202ENST00000469896 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
COMMD2-202ENST00000469896 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
COMMD2-202ENST00000469896 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
COMMD2-202ENST00000469896 MT1AP04731 61 aa3.29□□□□□ -1.88
COMMD2-202ENST00000469896 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
COMMD2-202ENST00000469896 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
COMMD2-202ENST00000469896 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
COMMD2-202ENST00000469896 INE1O15225 51 aa2.91□□□□□ -1.94
COMMD2-202ENST00000469896 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
COMMD2-202ENST00000469896 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
COMMD2-202ENST00000469896 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
COMMD2-202ENST00000469896 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
COMMD2-202ENST00000469896 PRM1P04553 51 aa2.09□□□□□ -2.07
COMMD2-202ENST00000469896 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 30.5 ms