RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 A0A0D9SG42 100 aa4.04□□□□□ -1.76
COL4A3-204ENST00000469504 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
COL4A3-204ENST00000469504 A0A1B0GU33 70 aa4.03□□□□□ -1.76
COL4A3-204ENST00000469504 MT1GP13640 62 aa4.02□□□□□ -1.77
COL4A3-204ENST00000469504 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
COL4A3-204ENST00000469504 SPINT4Q6UDR6 99 aa4.01□□□□□ -1.77
COL4A3-204ENST00000469504 PP632Q6XCG6 107 aa4.01□□□□□ -1.77
COL4A3-204ENST00000469504 SPATA8Q6RVD6 105 aa4□□□□□ -1.77
COL4A3-204ENST00000469504 RPS28P62857 69 aaKnown RBP3.99□□□□□ -1.77
COL4A3-204ENST00000469504 ATP5EP56381 51 aaPredicted RBP3.98□□□□□ -1.77
COL4A3-204ENST00000469504 KRTAP12-1P59990 96 aa3.97□□□□□ -1.77
COL4A3-204ENST00000469504 KRTAP19-5Q3LI72 72 aa3.97□□□□□ -1.77
COL4A3-204ENST00000469504 GPR98Q8WXG9 6306 aa3.96□□□□□ -1.78
COL4A3-204ENST00000469504 SMIM26A0A096LP01 95 aa3.95□□□□□ -1.78
COL4A3-204ENST00000469504 PSPHP1O15172 72 aa3.94□□□□□ -1.78
COL4A3-204ENST00000469504 PMAIP1Q13794 54 aa3.94□□□□□ -1.78
COL4A3-204ENST00000469504 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
COL4A3-204ENST00000469504 PRAC1Q96KF2 57 aa3.92□□□□□ -1.78
COL4A3-204ENST00000469504 A0A1B0GU69 56 aa3.91□□□□□ -1.78
COL4A3-204ENST00000469504 MT1MQ8N339 61 aa3.9□□□□□ -1.79
COL4A3-204ENST00000469504 MT1LQ93083 61 aa3.89□□□□□ -1.79
COL4A3-204ENST00000469504 TNP1P09430 55 aa3.88□□□□□ -1.79
COL4A3-204ENST00000469504 MT3P25713 68 aa3.87□□□□□ -1.79
COL4A3-204ENST00000469504 HMCN1Q96RW7 5635 aa3.83□□□□□ -1.8
COL4A3-204ENST00000469504 MT4P47944 62 aa3.83□□□□□ -1.8
COL4A3-204ENST00000469504 C10orf95Q9H7T3 257 aa3.83□□□□□ -1.8
COL4A3-204ENST00000469504 LCE3AQ5TA76 89 aa3.82□□□□□ -1.8
COL4A3-204ENST00000469504 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
COL4A3-204ENST00000469504 A8MU10 97 aa3.81□□□□□ -1.8
COL4A3-204ENST00000469504 PRR15LQ9BU68 103 aa3.8□□□□□ -1.8
COL4A3-204ENST00000469504 Q1T7F1 81 aa3.79□□□□□ -1.8
COL4A3-204ENST00000469504 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
COL4A3-204ENST00000469504 LINC01558Q9Y6Z2 57 aa3.74□□□□□ -1.81
COL4A3-204ENST00000469504 KRTAP12-3P60328 96 aa3.71□□□□□ -1.82
COL4A3-204ENST00000469504 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
COL4A3-204ENST00000469504 AHNAK2Q8IVF2 5795 aa3.67□□□□□ -1.82
COL4A3-204ENST00000469504 KTN1-AS1Q86SY8 53 aa3.66□□□□□ -1.82
COL4A3-204ENST00000469504 UQCR11O14957 56 aa3.65□□□□□ -1.83
COL4A3-204ENST00000469504 SPRR5A0A1B0GTR4 108 aa3.61□□□□□ -1.83
COL4A3-204ENST00000469504 KRTAP25-1Q3LHN0 102 aa3.61□□□□□ -1.83
COL4A3-204ENST00000469504 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
COL4A3-204ENST00000469504 KRTAP20-2Q3LI61 65 aa3.59□□□□□ -1.83
COL4A3-204ENST00000469504 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.83
COL4A3-204ENST00000469504 KRTAP12-4P60329 112 aa3.58□□□□□ -1.84
COL4A3-204ENST00000469504 K7ERS5 55 aa3.55□□□□□ -1.84
COL4A3-204ENST00000469504 A6NED7 52 aa3.54□□□□□ -1.84
COL4A3-204ENST00000469504 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
COL4A3-204ENST00000469504 BRK1Q8WUW1 75 aa3.53□□□□□ -1.84
COL4A3-204ENST00000469504 CDC42SE1Q9NRR8 79 aa3.53□□□□□ -1.84
COL4A3-204ENST00000469504 MIR22HGQ0VDD5 57 aa3.52□□□□□ -1.85
COL4A3-204ENST00000469504 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
COL4A3-204ENST00000469504 SYNE1Q8NF91 8797 aaKnown RBP3.49□□□□□ -1.85
COL4A3-204ENST00000469504 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
COL4A3-204ENST00000469504 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
COL4A3-204ENST00000469504 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
COL4A3-204ENST00000469504 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
COL4A3-204ENST00000469504 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
COL4A3-204ENST00000469504 MT1AP04731 61 aa3.33□□□□□ -1.88
COL4A3-204ENST00000469504 KRTAP5-2Q701N4 177 aa3.32□□□□□ -1.88
COL4A3-204ENST00000469504 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
COL4A3-204ENST00000469504 ROMO1P60602 79 aa3.23□□□□□ -1.89
COL4A3-204ENST00000469504 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
COL4A3-204ENST00000469504 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
COL4A3-204ENST00000469504 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
COL4A3-204ENST00000469504 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
COL4A3-204ENST00000469504 MUC5ACP98088 5654 aa3.09□□□□□ -1.92
COL4A3-204ENST00000469504 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
COL4A3-204ENST00000469504 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
COL4A3-204ENST00000469504 INE1O15225 51 aa2.68□□□□□ -1.98
COL4A3-204ENST00000469504 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
COL4A3-204ENST00000469504 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
COL4A3-204ENST00000469504 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
COL4A3-204ENST00000469504 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
COL4A3-204ENST00000469504 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
COL4A3-204ENST00000469504 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
COL4A3-204ENST00000469504 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
COL4A3-204ENST00000469504 PRM1P04553 51 aa1.67□□□□□ -2.14
COL4A3-204ENST00000469504 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 90.3 ms