RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
SMARCE1-207ENST00000469334 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
SMARCE1-207ENST00000469334 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
SMARCE1-207ENST00000469334 FSIP2Q5CZC0 6907 aa3.31□□□□□ -1.88
SMARCE1-207ENST00000469334 MT1BP07438 61 aa3.26□□□□□ -1.89
SMARCE1-207ENST00000469334 MT2AP02795 61 aa3.26□□□□□ -1.89
SMARCE1-207ENST00000469334 MT1FP04733 61 aa3.26□□□□□ -1.89
SMARCE1-207ENST00000469334 NEBP20929 6669 aa3.25□□□□□ -1.89
SMARCE1-207ENST00000469334 KRTAP10-7P60409 375 aaPredicted RBP3.25□□□□□ -1.89
SMARCE1-207ENST00000469334 LCE4AQ5TA78 99 aa3.24□□□□□ -1.89
SMARCE1-207ENST00000469334 M0R2T5 61 aa3.23□□□□□ -1.89
SMARCE1-207ENST00000469334 KRTAP20-1Q3LI63 56 aa3.23□□□□□ -1.89
SMARCE1-207ENST00000469334 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
SMARCE1-207ENST00000469334 KRTAP19-4Q3LI73 84 aa3.2□□□□□ -1.9
SMARCE1-207ENST00000469334 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
SMARCE1-207ENST00000469334 MT1HP80294 61 aa3.19□□□□□ -1.9
SMARCE1-207ENST00000469334 SYNE2Q8WXH0 6885 aaKnown RBP3.07□□□□□ -1.92
SMARCE1-207ENST00000469334 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
SMARCE1-207ENST00000469334 KRTAP9-3Q9BYQ3 159 aa3.03□□□□□ -1.92
SMARCE1-207ENST00000469334 KRTAP6-3Q3LI67 103 aa3□□□□□ -1.93
SMARCE1-207ENST00000469334 USH2AO75445 5202 aa3□□□□□ -1.93
SMARCE1-207ENST00000469334 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
SMARCE1-207ENST00000469334 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.93
SMARCE1-207ENST00000469334 MT1LQ93083 61 aa2.93□□□□□ -1.94
SMARCE1-207ENST00000469334 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
SMARCE1-207ENST00000469334 MT1EP04732 61 aa2.89□□□□□ -1.95
SMARCE1-207ENST00000469334 MACF1Q9UPN3 7388 aaKnown RBP2.86□□□□□ -1.95
SMARCE1-207ENST00000469334 KRTAP2-2Q9BYT5 123 aa2.83□□□□□ -1.96
SMARCE1-207ENST00000469334 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
SMARCE1-207ENST00000469334 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
SMARCE1-207ENST00000469334 MT1AP04731 61 aa2.75□□□□□ -1.97
SMARCE1-207ENST00000469334 MT1GP13640 62 aa2.71□□□□□ -1.98
SMARCE1-207ENST00000469334 MUC12Q9UKN1 5478 aa2.71□□□□□ -1.98
SMARCE1-207ENST00000469334 PRM1P04553 51 aa2.69□□□□□ -1.98
SMARCE1-207ENST00000469334 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
SMARCE1-207ENST00000469334 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
SMARCE1-207ENST00000469334 KRTAP19-6Q3LI70 58 aa2.68□□□□□ -1.98
SMARCE1-207ENST00000469334 KMT2DO14686 5537 aa2.67□□□□□ -1.98
SMARCE1-207ENST00000469334 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
SMARCE1-207ENST00000469334 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
SMARCE1-207ENST00000469334 MT1MQ8N339 61 aa2.65□□□□□ -1.98
SMARCE1-207ENST00000469334 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
SMARCE1-207ENST00000469334 KRTAP4-3Q9BYR4 195 aa2.65□□□□□ -1.99
SMARCE1-207ENST00000469334 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
SMARCE1-207ENST00000469334 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
SMARCE1-207ENST00000469334 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
SMARCE1-207ENST00000469334 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
SMARCE1-207ENST00000469334 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
SMARCE1-207ENST00000469334 KRTAP19-3Q7Z4W3 81 aa2.6□□□□□ -1.99
SMARCE1-207ENST00000469334 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
SMARCE1-207ENST00000469334 LCE1FQ5T754 118 aa2.57□□□□□ -2
SMARCE1-207ENST00000469334 LCE1AQ5T7P2 110 aa2.56□□□□□ -2
SMARCE1-207ENST00000469334 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2
SMARCE1-207ENST00000469334 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
SMARCE1-207ENST00000469334 SPRR2FQ96RM1 72 aa2.5□□□□□ -2.01
SMARCE1-207ENST00000469334 MT3P25713 68 aa2.48□□□□□ -2.01
SMARCE1-207ENST00000469334 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
SMARCE1-207ENST00000469334 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
SMARCE1-207ENST00000469334 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
SMARCE1-207ENST00000469334 LCE1EQ5T753 118 aa2.42□□□□□ -2.02
SMARCE1-207ENST00000469334 SPRR2AP35326 72 aa2.34□□□□□ -2.03
SMARCE1-207ENST00000469334 SPRR2EP22531 72 aa2.33□□□□□ -2.04
SMARCE1-207ENST00000469334 SPRR2BP35325 72 aa2.33□□□□□ -2.04
SMARCE1-207ENST00000469334 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
SMARCE1-207ENST00000469334 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
SMARCE1-207ENST00000469334 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
SMARCE1-207ENST00000469334 SPRR2DP22532 72 aa2.26□□□□□ -2.05
SMARCE1-207ENST00000469334 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
SMARCE1-207ENST00000469334 OBSCNQ5VST9 7968 aa2.04□□□□□ -2.08
SMARCE1-207ENST00000469334 MT4P47944 62 aa1.99□□□□□ -2.09
SMARCE1-207ENST00000469334 KRTAP20-2Q3LI61 65 aa1.85□□□□□ -2.11
SMARCE1-207ENST00000469334 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
SMARCE1-207ENST00000469334 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
SMARCE1-207ENST00000469334 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
SMARCE1-207ENST00000469334 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
SMARCE1-207ENST00000469334 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
SMARCE1-207ENST00000469334 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.18
SMARCE1-207ENST00000469334 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 58.6 ms