RNA–Protein interactions for RNA: ENST00000469017.6

SPIN1-203, Transcript of spindlin 1, humanhuman

TSL 2

Gene SPIN1, Length 2,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-203ENST00000469017 SPRR2AP35326 72 aa7.3□□□□□ -1.24
SPIN1-203ENST00000469017 LCE1AQ5T7P2 110 aa7.29□□□□□ -1.24
SPIN1-203ENST00000469017 KTN1-AS1Q86SY8 53 aa7.27□□□□□ -1.25
SPIN1-203ENST00000469017 NEBP20929 6669 aa7.24□□□□□ -1.25
SPIN1-203ENST00000469017 MT1LQ93083 61 aa7.21□□□□□ -1.25
SPIN1-203ENST00000469017 KRTAP19-3Q7Z4W3 81 aa7.19□□□□□ -1.26
SPIN1-203ENST00000469017 KRTAP15-1Q3LI76 137 aa7.12□□□□□ -1.27
SPIN1-203ENST00000469017 LCE5AQ5TCM9 118 aa7.12□□□□□ -1.27
SPIN1-203ENST00000469017 MT1GP13640 62 aa7.05□□□□□ -1.28
SPIN1-203ENST00000469017 KRTAP4-7Q9BYR0 210 aa7.05□□□□□ -1.28
SPIN1-203ENST00000469017 SPRR2DP22532 72 aa7.03□□□□□ -1.28
SPIN1-203ENST00000469017 MT1MQ8N339 61 aa7.02□□□□□ -1.29
SPIN1-203ENST00000469017 DSTQ03001 7570 aaKnown RBP7.02□□□□□ -1.29
SPIN1-203ENST00000469017 KRTAP4-3Q9BYR4 195 aa6.98□□□□□ -1.29
SPIN1-203ENST00000469017 SVIPQ8NHG7 77 aa6.96□□□□□ -1.29
SPIN1-203ENST00000469017 LCE3CQ5T5A8 94 aa6.88□□□□□ -1.31
SPIN1-203ENST00000469017 LCE3BQ5TA77 95 aa6.78□□□□□ -1.32
SPIN1-203ENST00000469017 KRTAP20-1Q3LI63 56 aa6.74□□□□□ -1.33
SPIN1-203ENST00000469017 KRTAP19-4Q3LI73 84 aa6.73□□□□□ -1.33
SPIN1-203ENST00000469017 KRTAP2-3P0C7H8 128 aa6.72□□□□□ -1.33
SPIN1-203ENST00000469017 KRTAP2-4Q9BYR9 128 aa6.72□□□□□ -1.33
SPIN1-203ENST00000469017 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
SPIN1-203ENST00000469017 KRTAP9-6A8MVA2 160 aa6.58□□□□□ -1.36
SPIN1-203ENST00000469017 KRTAP2-2Q9BYT5 123 aa6.56□□□□□ -1.36
SPIN1-203ENST00000469017 KRTAP2-1Q9BYU5 128 aa6.56□□□□□ -1.36
SPIN1-203ENST00000469017 SPRR5A0A1B0GTR4 108 aa6.4□□□□□ -1.38
SPIN1-203ENST00000469017 KRTAP5-5Q701N2 237 aaPredicted RBP6.35□□□□□ -1.39
SPIN1-203ENST00000469017 KRTAP4-9Q9BYQ8 210 aa6.24□□□□□ -1.41
SPIN1-203ENST00000469017 KRTAP5-4Q6L8H1 288 aa6.22□□□□□ -1.41
SPIN1-203ENST00000469017 MT4P47944 62 aa6.18□□□□□ -1.42
SPIN1-203ENST00000469017 H3BS24 57 aa6.17□□□□□ -1.42
SPIN1-203ENST00000469017 LCE4AQ5TA78 99 aa6.15□□□□□ -1.42
SPIN1-203ENST00000469017 SYNE1Q8NF91 8797 aaKnown RBP6.14□□□□□ -1.43
SPIN1-203ENST00000469017 KRTAP6-1Q3LI64 71 aa6.12□□□□□ -1.43
SPIN1-203ENST00000469017 LCE1DQ5T752 114 aa6.1□□□□□ -1.43
SPIN1-203ENST00000469017 MT1AP04731 61 aa6.1□□□□□ -1.43
SPIN1-203ENST00000469017 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.43
SPIN1-203ENST00000469017 HMCN1Q96RW7 5635 aa6.06□□□□□ -1.44
SPIN1-203ENST00000469017 LUZP6Q538Z0 58 aa5.97□□□□□ -1.45
SPIN1-203ENST00000469017 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
SPIN1-203ENST00000469017 KRTAP20-2Q3LI61 65 aa5.87□□□□□ -1.47
SPIN1-203ENST00000469017 KRTAP9-4Q9BYQ2 154 aa5.84□□□□□ -1.47
SPIN1-203ENST00000469017 KRTAP6-2Q3LI66 62 aa5.71□□□□□ -1.5
SPIN1-203ENST00000469017 KRTAP5-3Q6L8H2 238 aa5.66□□□□□ -1.5
SPIN1-203ENST00000469017 NDUFAF8A1L188 74 aa5.65□□□□□ -1.51
SPIN1-203ENST00000469017 KRTAP5-2Q701N4 177 aa5.57□□□□□ -1.52
SPIN1-203ENST00000469017 MT3P25713 68 aa5.53□□□□□ -1.52
SPIN1-203ENST00000469017 AHNAK2Q8IVF2 5795 aa5.52□□□□□ -1.53
SPIN1-203ENST00000469017 OBSCNQ5VST9 7968 aa5.48□□□□□ -1.53
SPIN1-203ENST00000469017 KRTAP5-10Q6L8G5 202 aa5.26□□□□□ -1.57
SPIN1-203ENST00000469017 GPR98Q8WXG9 6306 aa5.26□□□□□ -1.57
SPIN1-203ENST00000469017 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
SPIN1-203ENST00000469017 LCE3DQ9BYE3 92 aa5.09□□□□□ -1.59
SPIN1-203ENST00000469017 KRTAP5-8O75690 187 aa5□□□□□ -1.61
SPIN1-203ENST00000469017 A0A0A0MQY5 61 aa4.98□□□□□ -1.61
SPIN1-203ENST00000469017 KRTAP5-1Q6L8H4 278 aa4.92□□□□□ -1.62
SPIN1-203ENST00000469017 LCE3EQ5T5B0 92 aa4.89□□□□□ -1.63
SPIN1-203ENST00000469017 KRTAP5-7Q6L8G8 165 aa4.89□□□□□ -1.63
SPIN1-203ENST00000469017 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
SPIN1-203ENST00000469017 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
SPIN1-203ENST00000469017 KRTAP9-9Q9BYP9 154 aa4.74□□□□□ -1.65
SPIN1-203ENST00000469017 KRTAP4-12Q9BQ66 201 aa4.7□□□□□ -1.66
SPIN1-203ENST00000469017 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
SPIN1-203ENST00000469017 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
SPIN1-203ENST00000469017 LCE1CQ5T751 118 aa4.54□□□□□ -1.68
SPIN1-203ENST00000469017 INE1O15225 51 aa4.48□□□□□ -1.69
SPIN1-203ENST00000469017 MUC5BQ9HC84 5762 aaPredicted RBP4.48□□□□□ -1.69
SPIN1-203ENST00000469017 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
SPIN1-203ENST00000469017 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
SPIN1-203ENST00000469017 PRM1P04553 51 aa4.15□□□□□ -1.75
SPIN1-203ENST00000469017 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
SPIN1-203ENST00000469017 KRTAP21-2Q3LI59 83 aa4□□□□□ -1.77
SPIN1-203ENST00000469017 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
SPIN1-203ENST00000469017 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
SPIN1-203ENST00000469017 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
SPIN1-203ENST00000469017 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
SPIN1-203ENST00000469017 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.02
SPIN1-203ENST00000469017 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 79.1 ms