RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 SPRR2BP35325 72 aa4.85□□□□□ -1.63
SCAP-210ENST00000468965 SPRR2AP35326 72 aa4.85□□□□□ -1.63
SCAP-210ENST00000468965 LCE1AQ5T7P2 110 aa4.85□□□□□ -1.63
SCAP-210ENST00000468965 SVIPQ8NHG7 77 aa4.76□□□□□ -1.65
SCAP-210ENST00000468965 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
SCAP-210ENST00000468965 KRTAP19-3Q7Z4W3 81 aa4.72□□□□□ -1.65
SCAP-210ENST00000468965 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
SCAP-210ENST00000468965 MT1LQ93083 61 aa4.69□□□□□ -1.66
SCAP-210ENST00000468965 SPRR2DP22532 72 aa4.68□□□□□ -1.66
SCAP-210ENST00000468965 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
SCAP-210ENST00000468965 MT1GP13640 62 aa4.63□□□□□ -1.67
SCAP-210ENST00000468965 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
SCAP-210ENST00000468965 MT1MQ8N339 61 aa4.59□□□□□ -1.67
SCAP-210ENST00000468965 KRTAP2-3P0C7H8 128 aa4.57□□□□□ -1.68
SCAP-210ENST00000468965 KRTAP2-4Q9BYR9 128 aa4.57□□□□□ -1.68
SCAP-210ENST00000468965 LCE3BQ5TA77 95 aa4.52□□□□□ -1.69
SCAP-210ENST00000468965 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
SCAP-210ENST00000468965 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
SCAP-210ENST00000468965 KRTAP4-3Q9BYR4 195 aa4.49□□□□□ -1.69
SCAP-210ENST00000468965 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
SCAP-210ENST00000468965 KRTAP2-1Q9BYU5 128 aa4.45□□□□□ -1.7
SCAP-210ENST00000468965 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
SCAP-210ENST00000468965 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
SCAP-210ENST00000468965 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
SCAP-210ENST00000468965 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
SCAP-210ENST00000468965 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
SCAP-210ENST00000468965 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
SCAP-210ENST00000468965 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
SCAP-210ENST00000468965 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
SCAP-210ENST00000468965 KRTAP4-9Q9BYQ8 210 aa4.12□□□□□ -1.75
SCAP-210ENST00000468965 MT4P47944 62 aa4.07□□□□□ -1.76
SCAP-210ENST00000468965 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
SCAP-210ENST00000468965 LUZP6Q538Z0 58 aa4.06□□□□□ -1.76
SCAP-210ENST00000468965 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
SCAP-210ENST00000468965 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
SCAP-210ENST00000468965 KRTAP4-6Q9BYQ5 205 aa4.01□□□□□ -1.77
SCAP-210ENST00000468965 MT1AP04731 61 aa4□□□□□ -1.77
SCAP-210ENST00000468965 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
SCAP-210ENST00000468965 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.78
SCAP-210ENST00000468965 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
SCAP-210ENST00000468965 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
SCAP-210ENST00000468965 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
SCAP-210ENST00000468965 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
SCAP-210ENST00000468965 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
SCAP-210ENST00000468965 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
SCAP-210ENST00000468965 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
SCAP-210ENST00000468965 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
SCAP-210ENST00000468965 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
SCAP-210ENST00000468965 H3BS24 57 aa3.67□□□□□ -1.82
SCAP-210ENST00000468965 MT3P25713 68 aa3.61□□□□□ -1.83
SCAP-210ENST00000468965 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.83
SCAP-210ENST00000468965 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
SCAP-210ENST00000468965 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
SCAP-210ENST00000468965 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
SCAP-210ENST00000468965 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
SCAP-210ENST00000468965 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
SCAP-210ENST00000468965 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
SCAP-210ENST00000468965 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
SCAP-210ENST00000468965 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
SCAP-210ENST00000468965 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
SCAP-210ENST00000468965 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
SCAP-210ENST00000468965 INE1O15225 51 aa3.2□□□□□ -1.9
SCAP-210ENST00000468965 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
SCAP-210ENST00000468965 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
SCAP-210ENST00000468965 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
SCAP-210ENST00000468965 KRTAP4-2Q9BYR5 136 aa3.06□□□□□ -1.92
SCAP-210ENST00000468965 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
SCAP-210ENST00000468965 LCE1CQ5T751 118 aa3□□□□□ -1.93
SCAP-210ENST00000468965 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
SCAP-210ENST00000468965 PRM1P04553 51 aa2.72□□□□□ -1.97
SCAP-210ENST00000468965 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
SCAP-210ENST00000468965 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
SCAP-210ENST00000468965 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
SCAP-210ENST00000468965 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
SCAP-210ENST00000468965 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
SCAP-210ENST00000468965 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
SCAP-210ENST00000468965 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
SCAP-210ENST00000468965 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 192 ms