RNA–Protein interactions for RNA: ENST00000468948.1

ITGA4-205, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 393 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-205ENST00000468948 M0QY20 66 aa1.59□□□□□ -2.15
ITGA4-205ENST00000468948 VPS13BQ7Z7G8 4022 aa1.59□□□□□ -2.16
ITGA4-205ENST00000468948 HMCN2Q8NDA2 5059 aa1.58□□□□□ -2.16
ITGA4-205ENST00000468948 LRP1Q07954 4544 aaKnown RBP1.58□□□□□ -2.16
ITGA4-205ENST00000468948 PRLHP81277 87 aa1.56□□□□□ -2.16
ITGA4-205ENST00000468948 MMP24-AS1A0A0U1RRL7 71 aa1.55□□□□□ -2.16
ITGA4-205ENST00000468948 FAT3Q8TDW7 4589 aa1.55□□□□□ -2.16
ITGA4-205ENST00000468948 LRP2P98164 4655 aa1.54□□□□□ -2.16
ITGA4-205ENST00000468948 SPRR1AP35321 89 aa1.54□□□□□ -2.16
ITGA4-205ENST00000468948 M0R2T5 61 aa1.53□□□□□ -2.16
ITGA4-205ENST00000468948 LPAP08519 4548 aa1.51□□□□□ -2.17
ITGA4-205ENST00000468948 C9orf92A6NGG3 77 aa1.51□□□□□ -2.17
ITGA4-205ENST00000468948 KRTAP19-3Q7Z4W3 81 aa1.51□□□□□ -2.17
ITGA4-205ENST00000468948 DEFB105AQ8NG35 78 aa1.51□□□□□ -2.17
ITGA4-205ENST00000468948 FSIP2Q5CZC0 6907 aa1.5□□□□□ -2.17
ITGA4-205ENST00000468948 PKHD1L1Q86WI1 4243 aa1.5□□□□□ -2.17
ITGA4-205ENST00000468948 SPRR1BP22528 89 aa1.48□□□□□ -2.17
ITGA4-205ENST00000468948 DNAH8Q96JB1 4490 aa1.48□□□□□ -2.17
ITGA4-205ENST00000468948 MUC2Q02817 5179 aa1.48□□□□□ -2.17
ITGA4-205ENST00000468948 S4R3F8 94 aa1.45□□□□□ -2.18
ITGA4-205ENST00000468948 TNXBP22105 4242 aa1.45□□□□□ -2.18
ITGA4-205ENST00000468948 FAT4Q6V0I7 4981 aa1.44□□□□□ -2.18
ITGA4-205ENST00000468948 SPINK1P00995 79 aa1.43□□□□□ -2.18
ITGA4-205ENST00000468948 MT1HP80294 61 aa1.41□□□□□ -2.18
ITGA4-205ENST00000468948 RPS29P62273 56 aaKnown RBP1.34□□□□□ -2.19
ITGA4-205ENST00000468948 KRTAP19-2Q3LHN2 52 aa1.34□□□□□ -2.19
ITGA4-205ENST00000468948 MT2AP02795 61 aa1.31□□□□□ -2.2
ITGA4-205ENST00000468948 SYNE2Q8WXH0 6885 aaKnown RBP1.3□□□□□ -2.2
ITGA4-205ENST00000468948 MT1FP04733 61 aa1.3□□□□□ -2.2
ITGA4-205ENST00000468948 MUC17Q685J3 4493 aa1.3□□□□□ -2.2
ITGA4-205ENST00000468948 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
ITGA4-205ENST00000468948 USH2AO75445 5202 aa1.3□□□□□ -2.2
ITGA4-205ENST00000468948 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
ITGA4-205ENST00000468948 M0QZ58 72 aa1.27□□□□□ -2.21
ITGA4-205ENST00000468948 SSPOA2VEC9 5147 aa1.27□□□□□ -2.21
ITGA4-205ENST00000468948 GPR98Q8WXG9 6306 aa1.26□□□□□ -2.21
ITGA4-205ENST00000468948 KRTAP5-10Q6L8G5 202 aa1.24□□□□□ -2.21
ITGA4-205ENST00000468948 KRTAP20-1Q3LI63 56 aa1.23□□□□□ -2.21
ITGA4-205ENST00000468948 NEBP20929 6669 aa1.22□□□□□ -2.21
ITGA4-205ENST00000468948 FLGP20930 4061 aaPredicted RBP1.22□□□□□ -2.21
ITGA4-205ENST00000468948 KRTAP19-6Q3LI70 58 aa1.2□□□□□ -2.22
ITGA4-205ENST00000468948 SPRR2EP22531 72 aa1.18□□□□□ -2.22
ITGA4-205ENST00000468948 SPRR2BP35325 72 aa1.18□□□□□ -2.22
ITGA4-205ENST00000468948 SPRR2AP35326 72 aa1.18□□□□□ -2.22
ITGA4-205ENST00000468948 SPRR2FQ96RM1 72 aa1.18□□□□□ -2.22
ITGA4-205ENST00000468948 KRTAP2-3P0C7H8 128 aa1.17□□□□□ -2.22
ITGA4-205ENST00000468948 KRTAP2-4Q9BYR9 128 aa1.17□□□□□ -2.22
ITGA4-205ENST00000468948 KRTAP2-1Q9BYU5 128 aa1.17□□□□□ -2.22
ITGA4-205ENST00000468948 SPRR2DP22532 72 aa1.14□□□□□ -2.23
ITGA4-205ENST00000468948 KRTAP8-1Q8IUC2 63 aa1.14□□□□□ -2.23
ITGA4-205ENST00000468948 MT1BP07438 61 aa1.13□□□□□ -2.23
ITGA4-205ENST00000468948 TNP1P09430 55 aa1.13□□□□□ -2.23
ITGA4-205ENST00000468948 MUC12Q9UKN1 5478 aa1.12□□□□□ -2.23
ITGA4-205ENST00000468948 KMT2DO14686 5537 aa1.11□□□□□ -2.23
ITGA4-205ENST00000468948 MDN1Q9NU22 5596 aa1.09□□□□□ -2.23
ITGA4-205ENST00000468948 SPRR2GQ9BYE4 73 aa1.09□□□□□ -2.23
ITGA4-205ENST00000468948 KRTAP19-8Q3LI54 63 aa1.08□□□□□ -2.24
ITGA4-205ENST00000468948 MT1XP80297 61 aa1.06□□□□□ -2.24
ITGA4-205ENST00000468948 MT4P47944 62 aa1.04□□□□□ -2.24
ITGA4-205ENST00000468948 DSTQ03001 7570 aaKnown RBP1.04□□□□□ -2.24
ITGA4-205ENST00000468948 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
ITGA4-205ENST00000468948 AHNAKQ09666 5890 aaKnown RBP1.01□□□□□ -2.25
ITGA4-205ENST00000468948 AHNAK2Q8IVF2 5795 aa0.99□□□□□ -2.25
ITGA4-205ENST00000468948 MUC5BQ9HC84 5762 aaPredicted RBP0.96□□□□□ -2.26
ITGA4-205ENST00000468948 PRM1P04553 51 aa0.96□□□□□ -2.26
ITGA4-205ENST00000468948 KRTAP19-5Q3LI72 72 aa0.95□□□□□ -2.26
ITGA4-205ENST00000468948 MT1EP04732 61 aa0.94□□□□□ -2.26
ITGA4-205ENST00000468948 KRTAP19-7Q3SYF9 63 aa0.92□□□□□ -2.26
ITGA4-205ENST00000468948 MT1MQ8N339 61 aa0.92□□□□□ -2.26
ITGA4-205ENST00000468948 MT1GP13640 62 aa0.89□□□□□ -2.27
ITGA4-205ENST00000468948 MT1LQ93083 61 aa0.89□□□□□ -2.27
ITGA4-205ENST00000468948 KRTAP20-2Q3LI61 65 aa0.85□□□□□ -2.27
ITGA4-205ENST00000468948 MT1AP04731 61 aa0.83□□□□□ -2.28
ITGA4-205ENST00000468948 SYNE1Q8NF91 8797 aaKnown RBP0.8□□□□□ -2.28
ITGA4-205ENST00000468948 MUC5ACP98088 5654 aa0.79□□□□□ -2.28
ITGA4-205ENST00000468948 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
ITGA4-205ENST00000468948 KRTAP6-2Q3LI66 62 aa0.78□□□□□ -2.28
ITGA4-205ENST00000468948 KRTAP6-1Q3LI64 71 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 40.6 ms